CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY57932	Canola	plasma membrane	92.32	96.32
CDY57931	Canola	plasma membrane	82.78	85.62
CDY22607	Canola	plasma membrane	83.4	83.58
CDY53831	Canola	plasma membrane	83.19	83.37
CDY22609	Canola	plasma membrane	83.19	83.37
CDY62727	Canola	cytosol, peroxisome, plasma membrane	77.8	79.96
CDY63746	Canola	extracellular, plasma membrane	57.47	77.81
CDY22608	Canola	plasma membrane	80.71	77.18
CDY49542	Canola	plasma membrane	32.57	76.21
CDY04349	Canola	cytosol, peroxisome, plasma membrane	74.27	73.97
CDY48843	Canola	cytosol, peroxisome, plasma membrane	73.44	73.9
CDY53793	Canola	cytosol, peroxisome, plasma membrane	73.24	73.7
CDY44564	Canola	cytosol, peroxisome, plasma membrane	73.86	70.22
CDY60248	Canola	cytosol, peroxisome, plasma membrane	73.65	70.02
CDY04448	Canola	peroxisome	74.07	66.11
CDY46779	Canola	plasma membrane	63.9	64.3
TraesCS2A01G268200.1	Wheat	plasma membrane	59.34	59.21
TraesCS2D01G256000.1	Wheat	plasma membrane	59.13	59.01
EER97947	Sorghum	golgi, peroxisome, plasma membrane	58.71	58.96
GSMUA_Achr4P32180_001	Banana	plasma membrane	58.71	58.84
TraesCS2B01G266600.1	Wheat	plasma membrane	58.71	58.59
HORVU2Hr1G061190.4	Barley	plasma membrane	58.71	58.35
Os07t0134000-02	Rice	plasma membrane	57.88	57.29
Zm00001d018751_P001	Maize	cytosol, peroxisome, plasma membrane	56.85	55.8
CDX87522	Canola	plasma membrane	54.56	55.25
CDX88364	Canola	plasma membrane	54.56	55.25
CDX88365	Canola	plasma membrane	54.15	54.83
CDY43761	Canola	plasma membrane	51.24	53.0
CDX84450	Canola	plasma membrane	51.24	53.0
CDY14972	Canola	plasma membrane	52.28	52.94
CDY39844	Canola	plasma membrane	51.04	52.79
CDY47793	Canola	plasma membrane	52.07	52.73
CDX69918	Canola	plasma membrane	52.7	52.37
CDY21569	Canola	plasma membrane	52.7	52.37
CDY31348	Canola	plasma membrane	50.62	52.36
CDX78353	Canola	plasma membrane	52.49	51.95
CDX81121	Canola	plasma membrane	52.28	51.75
CDY36017	Canola	plasma membrane	50.62	50.73
CDY43854	Canola	plasma membrane	49.59	49.08
CDY60629	Canola	plasma membrane	41.91	48.67
CDY71454	Canola	golgi, peroxisome, plasma membrane	26.97	46.43
CDX87155	Canola	plasma membrane	33.4	45.74
CDY16869	Canola	plasma membrane	44.4	45.53
CDY53832	Canola	plasma membrane	83.4	38.14

Protein Annotations

EnsemblPlants:CDY62728	EnsemblPlantsGene:GSBRNA2T00037534001	GO:A0A078J7N2	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF278	PFAM:PF01490	ProteinID:CDY62728	ProteinID:CDY62728.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EF4029	UniProt:A0A078J7N2	MapMan:24.2.3.4.1	:

Description

BnaC05g49210DBnaC05g49210D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J7N2]

Coordinates

chrLK034183:-:8806..12419

Molecular Weight (calculated)

52439.4 Da

IEP (calculated)

8.851

GRAVY (calculated)

0.566

Length

482 amino acids

Sequence
(BLAST)

001: MKSFDTVESG DATGNNFDDD GREKRTGTLV TASAHIITAV VGSGVLSLAW AIAQLGWVAG IVILVTFAVI NYYTSTMLAD CYRSDTGTRN CTYMDVVRAY
101: LGGRKVQLCG LAQYGCFVGV TIGYTITASI SLVAIGKANC FHDKGHGAKC SMPNYPFMAA FGIVEIILSQ IPSFHKLSFL SIIATVMSFS YASIGIGLAM
201: AVVASGKVGK TGVTGTVAGV DVTASDKIWK SFQATGDIAF SYAYSSILVE IQACILSSID VLGVIIKIDT LRSSPPENKV MKKASLAGVS TTTFFYMLCG
301: CIGYAAFGNK APGDFLTEFF YEPYWLIDYA NACIVLHLIA AYQVFAQPIF QFVENKCNKA WPESNFITIE HSMNIPFLGK CRVNFFRLVW RTAYVILTTV
401: VAMIFPFFNS ILGLIGAAAF WPLTVYFPVE MHISQRKIKK YSMRWIGLKL LVSVCLIVTL LAAIGSIVGL IKSVKAYKHF HS

Best Arabidopsis Sequence Match ( AT1G10010.1 )
(BLAST)

001: MDAYNNPSAV ESGDAAVKSV DDDGREKRTG TFWTASAHII TAVIGSGVLS LAWAIAQLGW VAGTTVLVAF AIITYYTSTL LADCYRSPDS ITGTRNYNYM
101: GVVRSYLGGK KVQLCGVAQY VNLVGVTIGY TITASISLVA IGKSNCYHDK GHKAKCSVSN YPYMAAFGIV QIILSQLPNF HKLSFLSIIA AVMSFSYASI
201: GIGLAIATVA SGKIGKTELT GTVIGVDVTA SEKVWKLFQA IGDIAFSYAF TTILIEIQDT LRSSPPENKV MKRASLVGVS TTTVFYILCG CIGYAAFGNQ
301: APGDFLTDFG FYEPYWLIDF ANACIALHLI GAYQVYAQPF FQFVEENCNK KWPQSNFINK EYSSKVPLLG KCRVNLFRLV WRTCYVVLTT FVAMIFPFFN
401: AILGLLGAFA FWPLTVYFPV AMHIAQAKVK KYSRRWLALN LLVLVCLIVS ALAAVGSIIG LINSVKSYKP FKNLD

Arabidopsis Description

AAP8amino acid permease 8 [Source:TAIR;Acc:AT1G10010]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.