CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039735.1-P	Field mustard	plasma membrane	96.66	98.51
AT5G49630.1	Thale cress	cytosol	89.98	89.61
PGSC0003DMT400012730	Potato	plasma membrane	76.2	75.88
Solyc04g077050.2.1	Tomato	plasma membrane	75.99	75.68
KRH62133	Soybean	plasma membrane	75.57	75.57
KRH52842	Soybean	plasma membrane	75.57	75.57
CDY49542	Canola	plasma membrane	31.94	74.27
VIT_18s0001g08270.t01	Wine grape	plasma membrane	72.44	71.84
CDY48843	Canola	cytosol, peroxisome, plasma membrane	71.19	71.19
CDY53793	Canola	cytosol, peroxisome, plasma membrane	70.98	70.98
CDY04349	Canola	cytosol, peroxisome, plasma membrane	71.19	70.45
KRH04858	Soybean	plasma membrane	69.1	70.43
Solyc12g088190.1.1	Tomato	plasma membrane	70.56	69.26
PGSC0003DMT400030111	Potato	plasma membrane	70.56	69.26
CDY44564	Canola	cytosol, peroxisome, plasma membrane	72.44	68.44
CDY60248	Canola	cytosol, peroxisome, plasma membrane	72.23	68.24
GSMUA_Achr4P32180_001	Banana	plasma membrane	67.64	67.36
TraesCS2A01G268200.1	Wheat	plasma membrane	67.85	67.29
CDY57932	Canola	plasma membrane	64.72	67.1
TraesCS2B01G266600.1	Wheat	plasma membrane	67.43	66.87
TraesCS2D01G256000.1	Wheat	plasma membrane	67.43	66.87
EER97947	Sorghum	golgi, peroxisome, plasma membrane	66.39	66.25
HORVU2Hr1G061190.4	Barley	plasma membrane	67.01	66.19
CDY22609	Canola	plasma membrane	65.76	65.49
CDY57931	Canola	plasma membrane	63.47	65.24
CDY53831	Canola	plasma membrane	65.14	64.86
Os07t0134000-02	Rice	plasma membrane	65.76	64.68
CDY63746	Canola	extracellular, plasma membrane	47.81	64.33
Zm00001d018751_P001	Maize	cytosol, peroxisome, plasma membrane	65.76	64.15
CDY22607	Canola	plasma membrane	64.3	64.03
CDY62728	Canola	plasma membrane	64.3	63.9
CDY62727	Canola	cytosol, peroxisome, plasma membrane	61.38	62.69
CDY04448	Canola	peroxisome	70.15	62.22
CDY22608	Canola	plasma membrane	63.67	60.52
CDX88364	Canola	plasma membrane	56.99	57.35
CDX87522	Canola	plasma membrane	56.78	57.14
CDX88365	Canola	plasma membrane	56.58	56.93
CDY39844	Canola	plasma membrane	54.91	56.44
CDY31348	Canola	plasma membrane	54.91	56.44
CDY43761	Canola	plasma membrane	54.07	55.58
CDX84450	Canola	plasma membrane	54.07	55.58
CDY36017	Canola	plasma membrane	55.32	55.09
CDX69918	Canola	plasma membrane	54.91	54.23
CDY21569	Canola	plasma membrane	54.91	54.23
CDY43854	Canola	plasma membrane	55.11	54.21
CDX81121	Canola	plasma membrane	55.11	54.21
CDY47793	Canola	plasma membrane	53.86	54.2
CDX78353	Canola	plasma membrane	54.91	54.0
CDY14972	Canola	plasma membrane	53.65	53.99
CDY60629	Canola	plasma membrane	46.76	53.98
CDY71454	Canola	golgi, peroxisome, plasma membrane	30.69	52.5
CDY16869	Canola	plasma membrane	44.47	45.32
CDX87155	Canola	plasma membrane	33.19	45.17
CDY53832	Canola	plasma membrane	64.09	29.13

Protein Annotations

MapMan:24.2.3.4.1	GO:A0A078IBP6	UniProt:A0A078IBP6	InterPro:AA_transpt_TM	EnsemblPlants:CDY46779	ProteinID:CDY46779
ProteinID:CDY46779.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006810	GO:GO:0008150	GO:GO:0015172	GO:GO:0015175	GO:GO:0015804	GO:GO:0015810
GO:GO:0015827	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSBRNA2T00086197001	PFAM:PF01490	PANTHER:PTHR22950
PANTHER:PTHR22950:SF278	TMHMM:TMhelix	UniParc:UPI0004EF31F2	SEG:seg	:	:

Description

BnaCnng14480DBnaCnng14480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IBP6]

Coordinates

chrLK032685:+:63159..68232

Molecular Weight (calculated)

52456.9 Da

IEP (calculated)

9.259

GRAVY (calculated)

0.386

Length

479 amino acids

Sequence
(BLAST)

001: MEKKSMFIEQ SFTDHKSGDM NKNFDDDGRQ KRTGTWMTGS AHIITAVIGS GVLSLAWAIA QLGWVAGPAV LMAFSFITYF TSTMLADCYR SPDPVTGKRN
101: YTYMEVVRSY LGGRKVMLCG LAQYGNLIGI TIGYTITASI SMVAVKRSNC FHKNGHNVKC STSNTPFMII FACIQIVLSQ IPNFHNLSWL SILAAVMSFS
201: YASIGVGLSI AKVAGGGVHA RTALTGVTVG VDVTGSDKVW RTFQAVGDIA FAYAYSTDTL KASPPSENKA MKRASLVGVS TTTFFYMLCG CVGYAAFGNN
301: APGNFLTGFG FYEPFWLIDF ANVCIAVHLV GAYQVFCQPI FQFVESQSAK RWPDNKFITG EYKMNVPCGG DFGISLFRLV WRTSYVVVTA VVAMIFPFFN
401: DFLGLIGAAS FWPLTVYFPI EMHIAQKKMK KFSFTWTWLK ILSWACFLVS LVAAAGSVQG LIQSLLNADL FTKSVAPFS

Best Arabidopsis Sequence Match ( AT5G49630.1 )
(BLAST)

001: MEKKKSMFVE QSFPEHEIGD TNKNFDEDGR DKRTGTWMTG SAHIITAVIG SGVLSLAWAI AQLGWVAGPA VLMAFSFITY FTSTMLADCY RSPDPVTGKR
101: NYTYMEVVRS YLGGRKVQLC GLAQYGNLIG ITIGYTITAS ISMVAVKRSN CFHKNGHNVK CATSNTPFMI IFAIIQIILS QIPNFHNLSW LSILAAVMSF
201: CYASIGVGLS IAKAAGGGEH VRTTLTGVTV GIDVSGAEKI WRTFQAIGDI AFAYAYSTVL IEIQDTLKAG PPSENKAMKR ASLVGVSTTT FFYMLCGCVG
301: YAAFGNDAPG NFLTGFGFYE PFWLIDFANV CIAVHLIGAY QVFCQPIFQF VESQSAKRWP DNKFITGEYK IHVPCCGDFS INFLRLVWRT SYVVVTAVVA
401: MIFPFFNDFL GLIGAASFWP LTVYFPIEMH IAQKKIPKFS FTWTWLKILS WTCFIVSLVA AAGSVQGLIQ SLKDFKPFQA P

Arabidopsis Description

AAP6AAP6 [Source:UniProtKB/TrEMBL;Acc:A0A178UHU7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.