CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53831	Canola	plasma membrane	97.71	97.71
CDY22607	Canola	plasma membrane	87.32	87.32
CDY57932	Canola	plasma membrane	81.5	84.85
CDY62728	Canola	plasma membrane	83.37	83.19
CDY22608	Canola	plasma membrane	86.07	82.14
CDY57931	Canola	plasma membrane	79.21	81.76
CDY63746	Canola	extracellular, plasma membrane	58.63	79.21
CDY49542	Canola	plasma membrane	33.06	77.18
CDY62727	Canola	cytosol, peroxisome, plasma membrane	74.84	76.76
CDY48843	Canola	cytosol, peroxisome, plasma membrane	75.47	75.78
CDY53793	Canola	cytosol, peroxisome, plasma membrane	75.47	75.78
CDY04349	Canola	cytosol, peroxisome, plasma membrane	75.68	75.21
CDY44564	Canola	cytosol, peroxisome, plasma membrane	76.09	72.19
CDY60248	Canola	cytosol, peroxisome, plasma membrane	75.88	71.99
CDY04448	Canola	peroxisome	75.26	67.04
CDY46779	Canola	plasma membrane	65.49	65.76
GSMUA_Achr4P32180_001	Banana	plasma membrane	61.12	61.12
TraesCS2A01G268200.1	Wheat	plasma membrane	59.88	59.63
TraesCS2D01G256000.1	Wheat	plasma membrane	59.67	59.42
TraesCS2B01G266600.1	Wheat	plasma membrane	59.25	59.01
EER97947	Sorghum	golgi, peroxisome, plasma membrane	58.84	58.96
HORVU2Hr1G061190.4	Barley	plasma membrane	59.25	58.76
Os07t0134000-02	Rice	plasma membrane	59.46	58.73
Zm00001d018751_P001	Maize	cytosol, peroxisome, plasma membrane	57.17	56.01
CDX88364	Canola	plasma membrane	55.3	55.88
CDX87522	Canola	plasma membrane	55.09	55.67
CDX88365	Canola	plasma membrane	54.89	55.46
CDY39844	Canola	plasma membrane	53.22	54.94
CDY31348	Canola	plasma membrane	53.22	54.94
CDX84450	Canola	plasma membrane	52.81	54.51
CDY47793	Canola	plasma membrane	53.85	54.41
CDY14972	Canola	plasma membrane	53.85	54.41
CDY43761	Canola	plasma membrane	52.6	54.29
CDX69918	Canola	plasma membrane	54.05	53.61
CDY21569	Canola	plasma membrane	54.05	53.61
CDX78353	Canola	plasma membrane	54.26	53.59
CDX81121	Canola	plasma membrane	53.85	53.18
CDY36017	Canola	plasma membrane	52.39	52.39
CDY43854	Canola	plasma membrane	51.56	50.92
CDY60629	Canola	plasma membrane	43.24	50.12
CDY71454	Canola	golgi, peroxisome, plasma membrane	28.27	48.57
CDY16869	Canola	plasma membrane	45.32	46.38
CDX87155	Canola	plasma membrane	33.47	45.74
CDY53832	Canola	plasma membrane	87.53	39.94

Protein Annotations

EnsemblPlants:CDY22609	EnsemblPlantsGene:GSBRNA2T00019272001	GO:A0A078GB91	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF278	PFAM:PF01490	ProteinID:CDY22609	ProteinID:CDY22609.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EDD6F9	UniProt:A0A078GB91	MapMan:24.2.3.4.1	:

Description

BnaC08g42430DBnaC08g42430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GB91]

Coordinates

chrLK032134:-:62648..65598

Molecular Weight (calculated)

52367.2 Da

IEP (calculated)

9.000

GRAVY (calculated)

0.526

Length

481 amino acids

Sequence
(BLAST)

001: MKSFHTEYNP SAVEAAGNNF DDDGREKRTG TVMTASAHII TAVIGSGVLS LAWAIAQLGW VAGTVILVTF AVINYFTSTM LADCYRSPDT GIRNYNYMDV
101: VRAYLGGWKV KLCGLAQYGS LVGITIGYTI TASISLVAIG KANCFHEKGH GAKCSVSNYP LMAAFGIIQI VLSQIHNFHK LSFLSIIATV MSFSYASIGI
201: GLALAALASG KVGKTDLTGT VVGVDVTASD KIWRSFQAAG DIAFSYAFSV VLVEIQACIL SIRDDTLRSS PPENKVMKKA SLAGVSTTTG FYILCGCIGY
301: AAFGNQAPGD FLTDFGFYEP YWLIDFANAC IAVHLIAAYQ VFAQPIFQFI EKKCNKAWPE SNFITKDYSI NIPLLGKCRI NFFRLVWRST YVILTTVAAM
401: IFPFFNAILG LIGALTFWPL TVYFPVEMHI SQKKVKKYTM RWIGLKLLVL VCLVVSLLAA VGSIVGLISS VKAYKPFHNL D

Best Arabidopsis Sequence Match ( AT1G10010.2 )
(BLAST)

001: MMDAYNNPSA VESGDAAVKS VDDDGREKRT GTFWTASAHI ITAVIGSGVL SLAWAIAQLG WVAGTTVLVA FAIITYYTST LLADCYRSPD SITGTRNYNY
101: MGVVRSYLGG KKVQLCGVAQ YVNLVGVTIG YTITASISLV AIGKSNCYHD KGHKAKCSVS NYPYMAAFGI VQIILSQLPN FHKLSFLSII AAVMSFSYAS
201: IGIGLAIATV ASGKIGKTEL TGTVIGVDVT ASEKVWKLFQ AIGDIAFSYA FTTILIEIQD TLRSSPPENK VMKRASLVGV STTTVFYILC GCIGYAAFGN
301: QAPGDFLTDF GFYEPYWLID FANACIALHL IGAYQVYAQP FFQFVEENCN KKWPQSNFIN KEYSSKVPLL GKCRVNLFRL VWRTCYVVLT TFVAMIFPFF
401: NAILGLLGAF AFWPLTVYFP VAMHIAQAKV KKYSRRWLAL NLLVLVCLIV SALAAVGSII GLINSVKSYK PFKNLD

Arabidopsis Description

AAP8amino acid permease 8 [Source:TAIR;Acc:AT1G10010]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.