CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra019969.1-P	Field mustard	plasma membrane	92.64	97.27
CDY62728	Canola	plasma membrane	96.32	92.32
CDY57931	Canola	plasma membrane	85.71	84.98
CDY53831	Canola	plasma membrane	84.85	81.5
CDY22609	Canola	plasma membrane	84.85	81.5
CDY22607	Canola	plasma membrane	84.85	81.5
CDY62727	Canola	cytosol, peroxisome, plasma membrane	79.65	78.46
CDY49542	Canola	plasma membrane	34.63	77.67
CDY22608	Canola	plasma membrane	82.9	75.99
CDY63746	Canola	extracellular, plasma membrane	58.23	75.56
CDY48843	Canola	cytosol, peroxisome, plasma membrane	76.19	73.49
CDY04349	Canola	cytosol, peroxisome, plasma membrane	76.84	73.35
CDY53793	Canola	cytosol, peroxisome, plasma membrane	75.97	73.28
CDY60248	Canola	cytosol, peroxisome, plasma membrane	76.62	69.82
CDY44564	Canola	cytosol, peroxisome, plasma membrane	76.41	69.63
CDY04448	Canola	peroxisome	76.84	65.74
CDY46779	Canola	plasma membrane	67.1	64.72
GSMUA_Achr4P32180_001	Banana	plasma membrane	60.39	58.0
EER97947	Sorghum	golgi, peroxisome, plasma membrane	60.17	57.92
TraesCS2A01G268200.1	Wheat	plasma membrane	60.39	57.76
TraesCS2D01G256000.1	Wheat	plasma membrane	60.17	57.56
TraesCS2B01G266600.1	Wheat	plasma membrane	59.96	57.35
HORVU2Hr1G061190.4	Barley	plasma membrane	59.74	56.91
Os07t0134000-02	Rice	plasma membrane	59.09	56.06
Zm00001d018751_P001	Maize	cytosol, peroxisome, plasma membrane	58.23	54.79
CDX87522	Canola	plasma membrane	55.41	53.78
CDX88364	Canola	plasma membrane	55.41	53.78
CDX88365	Canola	plasma membrane	54.98	53.36
CDY47793	Canola	plasma membrane	53.9	52.31
CDY14972	Canola	plasma membrane	53.68	52.1
CDY43761	Canola	plasma membrane	51.95	51.5
CDX84450	Canola	plasma membrane	51.95	51.5
CDY39844	Canola	plasma membrane	51.73	51.29
CDX69918	Canola	plasma membrane	53.68	51.13
CDY21569	Canola	plasma membrane	53.68	51.13
CDY31348	Canola	plasma membrane	51.3	50.86
CDX78353	Canola	plasma membrane	53.46	50.72
CDX81121	Canola	plasma membrane	53.25	50.51
CDY36017	Canola	plasma membrane	51.95	49.9
CDY43854	Canola	plasma membrane	50.65	48.05
CDY60629	Canola	plasma membrane	42.64	47.47
CDY16869	Canola	plasma membrane	45.89	45.11
CDY71454	Canola	golgi, peroxisome, plasma membrane	27.06	44.64
CDX87155	Canola	plasma membrane	33.98	44.6
CDY53832	Canola	plasma membrane	85.28	37.38

Protein Annotations

EnsemblPlants:CDY57932	EnsemblPlantsGene:GSBRNA2T00022864001	GO:A0A078J5G2	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF278	PFAM:PF01490	ProteinID:CDY57932	ProteinID:CDY57932.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EE78DD	UniProt:A0A078J5G2	MapMan:24.2.3.4.1	:

Description

BnaA06g38010DBnaA06g38010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J5G2]

Coordinates

chrLK033617:-:40219..44036

Molecular Weight (calculated)

50498.0 Da

IEP (calculated)

9.242

GRAVY (calculated)

0.520

Length

462 amino acids

Sequence
(BLAST)

001: MKSFDTVESG DATGNNFDDD GREKRTGTLM TASAHIITAV VGSGVLSLAW AIAQLGWVAG IVILVTFAVI NYYTSTMLAD CYRSDTGTRN CTYMDVVRAY
101: LGGKKVQLCG LAQYGCFVGV TIGYTITASI SLVAIGKANC FHDKRHGAKC SMPNYPFMAV FGIVEIILSQ IPSFHKLSFL SIIATVMSFS YASIGIGLAM
201: AVVASGKVGK TGATGTVVGV DVTTSDKIWK SFQATGDIAF SYAYSSILDT LRSSPPENKV MKKASLAGVS TTTFFYMLCG CIGYAAFGNK APGDFLTDFF
301: YEPYWLIDFA NACIVLHLIA AYQVFAQPIF QFVENKCNKA WPESNFITKE HSMNILFLGK CRISFFRLVW RTAYVIFTTV VAMIFPFFNA ILGLIGAAAF
401: WPLTVYFPVE MHISQRKIKK HSMRWIGLKL LVLVCLIVTL LAAIGSIVGL IKSVKAYKHF HS

Best Arabidopsis Sequence Match ( AT1G10010.1 )
(BLAST)

001: MDAYNNPSAV ESGDAAVKSV DDDGREKRTG TFWTASAHII TAVIGSGVLS LAWAIAQLGW VAGTTVLVAF AIITYYTSTL LADCYRSPDS ITGTRNYNYM
101: GVVRSYLGGK KVQLCGVAQY VNLVGVTIGY TITASISLVA IGKSNCYHDK GHKAKCSVSN YPYMAAFGIV QIILSQLPNF HKLSFLSIIA AVMSFSYASI
201: GIGLAIATVA SGKIGKTELT GTVIGVDVTA SEKVWKLFQA IGDIAFSYAF TTILIEIQDT LRSSPPENKV MKRASLVGVS TTTVFYILCG CIGYAAFGNQ
301: APGDFLTDFG FYEPYWLIDF ANACIALHLI GAYQVYAQPF FQFVEENCNK KWPQSNFINK EYSSKVPLLG KCRVNLFRLV WRTCYVVLTT FVAMIFPFFN
401: AILGLLGAFA FWPLTVYFPV AMHIAQAKVK KYSRRWLALN LLVLVCLIVS ALAAVGSIIG LINSVKSYKP FKNLD

Arabidopsis Description

AAP8amino acid permease 8 [Source:TAIR;Acc:AT1G10010]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.