CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 5
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	extracellular
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031696.1-P	Field mustard	plasma membrane	55.75	98.94
CDY22607	Canola	plasma membrane	84.92	88.98
CDY22609	Canola	plasma membrane	82.14	86.07
CDY53831	Canola	plasma membrane	81.35	85.24
CDY57932	Canola	plasma membrane	75.99	82.9
CDY62728	Canola	plasma membrane	77.18	80.71
CDY57931	Canola	plasma membrane	73.21	79.18
CDY63746	Canola	extracellular, plasma membrane	54.17	76.69
CDY49542	Canola	plasma membrane	30.56	74.76
CDY62727	Canola	cytosol, peroxisome, plasma membrane	68.85	73.99
CDY48843	Canola	cytosol, peroxisome, plasma membrane	69.84	73.49
CDY53793	Canola	cytosol, peroxisome, plasma membrane	69.64	73.28
CDY04349	Canola	cytosol, peroxisome, plasma membrane	69.84	72.73
CDY44564	Canola	cytosol, peroxisome, plasma membrane	70.24	69.82
CDY60248	Canola	cytosol, peroxisome, plasma membrane	70.04	69.63
CDY04448	Canola	peroxisome	69.44	64.81
CDY46779	Canola	plasma membrane	60.52	63.67
GSMUA_Achr4P32180_001	Banana	plasma membrane	56.35	59.04
EER97947	Sorghum	golgi, peroxisome, plasma membrane	55.75	58.54
TraesCS2D01G256000.1	Wheat	plasma membrane	55.56	57.97
TraesCS2A01G268200.1	Wheat	plasma membrane	55.56	57.97
TraesCS2B01G266600.1	Wheat	plasma membrane	55.16	57.56
HORVU2Hr1G061190.4	Barley	plasma membrane	55.16	57.32
Os07t0134000-02	Rice	plasma membrane	54.76	56.67
Zm00001d018751_P001	Maize	cytosol, peroxisome, plasma membrane	54.56	56.01
CDY14972	Canola	plasma membrane	52.18	55.25
CDY47793	Canola	plasma membrane	51.98	55.04
CDX87522	Canola	plasma membrane	51.19	54.2
CDX88364	Canola	plasma membrane	51.19	54.2
CDX88365	Canola	plasma membrane	50.79	53.78
CDX69918	Canola	plasma membrane	50.4	52.37
CDY21569	Canola	plasma membrane	50.4	52.37
CDX78353	Canola	plasma membrane	50.6	52.36
CDX84450	Canola	plasma membrane	48.41	52.36
CDX81121	Canola	plasma membrane	50.4	52.16
CDY43761	Canola	plasma membrane	48.21	52.15
CDY36017	Canola	plasma membrane	49.6	51.98
CDY31348	Canola	plasma membrane	48.02	51.93
CDY39844	Canola	plasma membrane	48.02	51.93
CDY43854	Canola	plasma membrane	49.21	50.92
CDY60629	Canola	plasma membrane	41.87	50.84
CDY71454	Canola	golgi, peroxisome, plasma membrane	26.98	48.57
CDY16869	Canola	plasma membrane	43.85	47.02
CDX87155	Canola	plasma membrane	32.54	46.59
CDY53832	Canola	plasma membrane	89.68	42.88

Protein Annotations

EnsemblPlants:CDY22608	EnsemblPlantsGene:GSBRNA2T00019271001	GO:A0A078GDA4	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF278	PFAM:PF01490	ProteinID:CDY22608	ProteinID:CDY22608.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EEC33E	UniProt:A0A078GDA4	MapMan:24.2.3.4.1	:

Description

BnaC08g42420DBnaC08g42420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GDA4]

Coordinates

chrLK032134:-:56947..59793

Molecular Weight (calculated)

54684.0 Da

IEP (calculated)

8.825

GRAVY (calculated)

0.535

Length

504 amino acids

Sequence
(BLAST)

001: MHRLYIDMSF TLHCLCFFSP LNMKSFDTSS AVESGTVAGN NVDDDGGEKR TGTLMTASAH IITAVIGSGV LSLAWAIAQL GWVAGTVLLV SFAVVVNYTS
101: RMLADCYRSP DAGTRNNTYM DVVRAYLGGR KVQLCGLAQY GSLVGMTIGY TITASISFVA IGKANCFHDK GHGAKFSVSN YPAMAAFGII QIVLSQIPNF
201: HKLSFLSIIA AVMSFSYSSI GTGLALADLA SGKVGKTELT GTVVGVDVTA SDKLWKSFQA AGNIAFSYAY SVVLVEIQAC IFSTRNDTLS SSPPENIVMK
301: KASIVGVSTA TAFYILCACM GYATFGSQAP GDLLTDFGFY EPYWLIDFAN ACIAVHLIGA YQQVIAQPIF QFVEKKCNKA WPESNFITKE HSMNIPLLGK
401: CRINFFRLVW RTIYVIFSTV IAMIFPFFNA VLGLIGAVAF WPLTVYFPVE MHISQKKIKK YTMRWIGLKL LVLVCLIVSL LAAVGSIVGL ISSVKAYKPF
501: HNLD

Best Arabidopsis Sequence Match ( AT1G10010.1 )
(BLAST)

001: MDAYNNPSAV ESGDAAVKSV DDDGREKRTG TFWTASAHII TAVIGSGVLS LAWAIAQLGW VAGTTVLVAF AIITYYTSTL LADCYRSPDS ITGTRNYNYM
101: GVVRSYLGGK KVQLCGVAQY VNLVGVTIGY TITASISLVA IGKSNCYHDK GHKAKCSVSN YPYMAAFGIV QIILSQLPNF HKLSFLSIIA AVMSFSYASI
201: GIGLAIATVA SGKIGKTELT GTVIGVDVTA SEKVWKLFQA IGDIAFSYAF TTILIEIQDT LRSSPPENKV MKRASLVGVS TTTVFYILCG CIGYAAFGNQ
301: APGDFLTDFG FYEPYWLIDF ANACIALHLI GAYQVYAQPF FQFVEENCNK KWPQSNFINK EYSSKVPLLG KCRVNLFRLV WRTCYVVLTT FVAMIFPFFN
401: AILGLLGAFA FWPLTVYFPV AMHIAQAKVK KYSRRWLALN LLVLVCLIVS ALAAVGSIIG LINSVKSYKP FKNLD

Arabidopsis Description

AAP8amino acid permease 8 [Source:TAIR;Acc:AT1G10010]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.