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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • peroxisome 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, secretory
BaCelLo:nucleus
MultiLoc:peroxisome
Plant-mPloc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES15765 Sorghum plasma membrane 94.56 94.36
EES16764 Sorghum plasma membrane 92.68 91.91
Zm00001d023592_P001 Maize plasma membrane 90.8 90.42
EES16763 Sorghum plasma membrane 90.17 89.61
Os12t0181600-01 Rice plasma membrane 87.45 88.0
Os12t0181500-01 Rice plasma membrane 87.24 87.79
TraesCS5A01G115100.1 Wheat plasma membrane 85.98 85.8
KXG23123 Sorghum mitochondrion, plastid 89.96 85.66
TraesCS5D01G125700.1 Wheat plasma membrane 85.77 85.59
HORVU5Hr1G037660.1 Barley plasma membrane 85.56 85.39
TraesCS5B01G116100.1 Wheat plasma membrane 85.56 85.39
EES08162 Sorghum plasma membrane 79.29 78.79
EES08159 Sorghum cytosol, peroxisome, plasma membrane 77.2 75.93
GSMUA_Achr10P... Banana plasma membrane 62.13 71.22
GSMUA_Achr2P20670_001 Banana plasma membrane 65.27 70.75
OQU78029 Sorghum cytosol, peroxisome, plasma membrane 71.76 70.72
EES03989 Sorghum plasma membrane 72.59 70.67
KXG23106 Sorghum cytosol, peroxisome, plasma membrane 70.71 70.12
GSMUA_Achr3P02860_001 Banana peroxisome, plasma membrane, vacuole 65.06 69.57
Solyc06g060110.2.1 Tomato plasma membrane 68.2 69.21
PGSC0003DMT400030727 Potato plasma membrane 67.99 68.71
Bra015673.1-P Field mustard plasma membrane 67.99 68.28
CDX88364 Canola plasma membrane 67.78 68.07
CDX88365 Canola plasma membrane 67.36 67.65
CDX87522 Canola plasma membrane 67.36 67.65
GSMUA_Achr6P12890_001 Banana peroxisome, plasma membrane, vacuole 68.62 67.63
CDY43761 Canola plasma membrane 65.48 67.17
Bra024241.1-P Field mustard plasma membrane 65.27 66.95
AT1G77380.1 Thale cress plasma membrane 66.53 66.81
AT5G63850.1 Thale cress plasma membrane 64.85 66.52
CDX84450 Canola plasma membrane 64.64 66.31
CDY31348 Canola plasma membrane 64.64 66.31
VIT_18s0001g02020.t01 Wine grape cytosol, peroxisome, plasma membrane 66.53 66.11
Bra029199.1-P Field mustard plasma membrane 64.23 65.88
CDY39844 Canola plasma membrane 64.23 65.88
CDX69918 Canola plasma membrane 66.32 65.36
PGSC0003DMT400015426 Potato plasma membrane 65.48 65.34
Bra009371.1-P Field mustard plasma membrane 66.11 65.15
CDY21569 Canola plasma membrane 66.11 65.15
VIT_10s0116g01380.t01 Wine grape plasma membrane 60.88 64.24
KRH53283 Soybean golgi, peroxisome, plasma membrane 65.27 64.07
AT5G09220.1 Thale cress cytosol, peroxisome, plasma membrane 65.69 63.69
KRH16402 Soybean plasma membrane 63.81 63.67
Solyc11g005070.1.1 Tomato plasma membrane 63.39 63.66
KRH64623 Soybean cytosol, peroxisome, plasma membrane 64.85 63.66
CDX78353 Canola plasma membrane 64.85 63.66
KRH17988 Soybean plasma membrane 63.6 63.47
Bra006016.1-P Field mustard plasma membrane 64.64 63.45
CDX81121 Canola plasma membrane 64.64 63.45
EES13588 Sorghum cytosol, peroxisome, plasma membrane 65.48 62.85
PGSC0003DMT400043280 Potato plasma membrane 61.51 62.82
AT1G44100.1 Thale cress plasma membrane 61.92 61.67
CDY36017 Canola plasma membrane 61.72 61.33
CDY60629 Canola plasma membrane 53.14 61.2
Bra014020.1-P Field mustard plasma membrane 61.09 60.71
CDY43854 Canola plasma membrane 61.51 60.37
Bra032199.1-P Field mustard plasma membrane 61.51 60.37
PGSC0003DMT400008650 Potato plasma membrane 58.16 59.91
CDY47793 Canola plasma membrane 59.62 59.87
Bra036939.1-P Field mustard plasma membrane 59.2 59.45
CDY14972 Canola plasma membrane 59.2 59.45
CDY71454 Canola golgi, peroxisome, plasma membrane 34.73 59.29
EER88513 Sorghum peroxisome 59.83 58.25
VIT_07s0031g02340.t01 Wine grape peroxisome 68.41 58.08
EER97947 Sorghum golgi, peroxisome, plasma membrane 56.69 56.46
OQU76565 Sorghum plasma membrane 53.97 54.43
KXG20176 Sorghum plasma membrane 51.88 54.27
KXG33808 Sorghum plasma membrane 52.51 53.4
KXG26523 Sorghum plasma membrane 51.05 53.04
OQU87977 Sorghum plasma membrane 50.63 51.93
EES11591 Sorghum plasma membrane 51.46 51.68
EES07345 Sorghum golgi, peroxisome, plasma membrane 47.28 48.09
EES15803 Sorghum plasma membrane 47.91 47.61
Protein Annotations
MapMan:24.2.3.4.1EntrezGene:8082760InterPro:AA_transpt_TMUniProt:C5YT47EnsemblPlants:EES16761ProteinID:EES16761
ProteinID:EES16761.1GO:GO:0003333GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0015171GO:GO:0016020GO:GO:0016021
PFAM:PF01490PANTHER:PTHR22950PANTHER:PTHR22950:SF466EnsemblPlantsGene:SORBI_3008G058900TMHMM:TMhelixUniParc:UPI0001A87FB3
RefSeq:XP_002442923.1:::::
Description
hypothetical protein
Coordinates
chr8:-:6185710..6187740
Molecular Weight (calculated)
51330.2 Da
IEP (calculated)
7.666
GRAVY (calculated)
0.511
Length
478 amino acids
Sequence
(BLAST)
001: MAAHEGTTNR VAPMEVTVEA GNAGEAAWLD DDGRPRRAGT FWTASAHIIT AVIGSGVLSL AWAIAQLGWV AGPAAMLLFA FVTYYTATLL AECYRTGDPE
101: TGKRNYTYMD AVRSNLGGAK VALCGVIQYA NLVGVAIGYT IASSISMKAI RRAGCFHTHG HEDPCKSSSI PYMVVFGAVQ IVFSQIPDFD QISWLSIVAA
201: VMSFTYSSIG LSLGIAQTIS NGGFKGSLTG ISIGAGVTST QKVWHSLQAF GDIAFAYSFS NILIEIQDTI KAPPPSESKV MQKATRLSVA TTTIFYMLCG
301: CMGYAAFGDA APDNLLTGFG FYEPFWLLDV ANVAIVVHLV GAYQVFCQPI FAFVERRAAA AWPDSAFISR ELRVGPFALS LFRLTWRSAF VCVTTVVAML
401: LPFFGDVVGF LGAVSFWPLT VYFPVEMYIN QRRVARGSTK WICLQTLSIS CLLVSIAAAA GSIADVIDAL KVYRPFSG
Best Arabidopsis Sequence Match ( AT1G44100.1 )
(BLAST)
001: MVVQNVQDLD VLPKHSSDSF DDDGRPKRTG TVWTASAHII TAVIGSGVLS LAWAVAQIGW IGGPVAMLLF SFVTFYTSTL LCSCYRSGDS VTGKRNYTYM
101: DAIHSNLGGI KVKVCGVVQY VNLFGTAIGY TIASAISLVA IQRTSCQQMN GPNDPCHVNG NVYMIAFGIV QIIFSQIPDF DQLWWLSIVA AVMSFAYSAI
201: GLGLGVSKVV ENKEIKGSLT GVTVGTVTLS GTVTSSQKIW RTFQSLGNIA FAYSYSMILI EIQDTVKSPP AEVNTMRKAT FVSVAVTTVF YMLCGCVGYA
301: AFGDNAPGNL LAHGGFRNPY WLLDIANLAI VIHLVGAYQV YCQPLFAFVE KEASRRFPES EFVTKEIKIQ LFPGKPFNLN LFRLVWRTFF VMTTTLISML
401: MPFFNDVVGL LGAIGFWPLT VYFPVEMYIA QKNVPRWGTK WVCLQVLSVT CLFVSVAAAA GSVIGIVSDL KVYKPFQSEF
Arabidopsis Description
AAP5Amino acid permease 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GUM3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.