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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • plasma membrane 4
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:golgi, plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d042619_P002 Maize plasma membrane 96.74 96.15
HORVU3Hr1G091110.1 Barley cytosol, vacuole 21.59 89.83
TraesCS3A01G406800.1 Wheat plasma membrane 84.93 89.29
HORVU3Hr1G091120.3 Barley plasma membrane 87.17 89.17
TraesCS3A01G406900.1 Wheat plasma membrane 86.56 88.54
TraesCS3D01G402200.1 Wheat plasma membrane 86.76 88.38
TraesCS3A01G407000.1 Wheat plasma membrane 86.15 88.12
TraesCS3B01G441200.1 Wheat plasma membrane 85.95 87.92
TraesCS3B01G441100.1 Wheat plasma membrane 85.95 87.92
Os01t0882800-01 Rice plasma membrane 86.35 86.89
TraesCS3D01G402300.1 Wheat plasma membrane 86.76 86.41
OQU78029 Sorghum cytosol, peroxisome, plasma membrane 84.32 85.36
HORVU3Hr1G091020.2 Barley mitochondrion 86.97 80.41
TraesCS3B01G441300.2 Wheat cytosol, peroxisome, plasma membrane, plastid 86.56 80.04
HORVU3Hr1G091070.1 Barley cytosol 74.13 79.48
GSMUA_Achr10P... Banana plasma membrane 63.95 75.3
GSMUA_Achr2P20670_001 Banana plasma membrane 67.01 74.6
GSMUA_Achr3P02860_001 Banana peroxisome, plasma membrane, vacuole 67.41 74.05
PGSC0003DMT400030727 Potato plasma membrane 70.67 73.36
Solyc06g060110.2.1 Tomato plasma membrane 70.06 73.04
EES16761 Sorghum plasma membrane 70.67 72.59
EES08162 Sorghum plasma membrane 71.08 72.56
EES15765 Sorghum plasma membrane 70.67 72.44
GSMUA_Achr6P12890_001 Banana peroxisome, plasma membrane, vacuole 70.67 71.55
EES16763 Sorghum plasma membrane 69.86 71.31
AT5G63850.1 Thale cress plasma membrane 67.62 71.24
EES16764 Sorghum plasma membrane 69.65 70.95
CDY31348 Canola plasma membrane 66.8 70.39
Bra029199.1-P Field mustard plasma membrane 66.6 70.17
CDY43761 Canola plasma membrane 66.6 70.17
Bra024241.1-P Field mustard plasma membrane 66.4 69.96
CDY39844 Canola plasma membrane 66.4 69.96
Bra015673.1-P Field mustard plasma membrane 67.62 69.75
CDX88364 Canola plasma membrane 67.41 69.54
CDX87522 Canola plasma membrane 67.21 69.33
CDX84450 Canola plasma membrane 65.78 69.31
AT1G77380.1 Thale cress plasma membrane 67.01 69.12
CDX88365 Canola plasma membrane 67.01 69.12
PGSC0003DMT400015426 Potato plasma membrane 67.21 68.89
VIT_10s0116g01380.t01 Wine grape plasma membrane 63.34 68.65
CDY21569 Canola plasma membrane 67.62 68.45
CDX69918 Canola plasma membrane 67.41 68.25
VIT_18s0001g02020.t01 Wine grape cytosol, peroxisome, plasma membrane 66.8 68.19
CDX78353 Canola plasma membrane 67.62 68.17
Bra009371.1-P Field mustard plasma membrane 67.21 68.04
Bra006016.1-P Field mustard plasma membrane 67.41 67.97
CDX81121 Canola plasma membrane 67.41 67.97
AT5G09220.1 Thale cress cytosol, peroxisome, plasma membrane 68.23 67.95
KXG23123 Sorghum mitochondrion, plastid 69.25 67.73
EES08159 Sorghum cytosol, peroxisome, plasma membrane 67.01 67.7
Solyc11g005070.1.1 Tomato plasma membrane 65.58 67.65
KRH64623 Soybean cytosol, peroxisome, plasma membrane 66.4 66.94
PGSC0003DMT400043280 Potato plasma membrane 63.75 66.88
KRH53283 Soybean golgi, peroxisome, plasma membrane 66.19 66.74
TraesCS7D01G388300.1 Wheat plasma membrane 71.28 66.41
KRH17988 Soybean plasma membrane 63.95 65.55
CDY60629 Canola plasma membrane 55.4 65.54
KRH16402 Soybean plasma membrane 63.54 65.14
CDY43854 Canola plasma membrane 63.95 64.48
Bra032199.1-P Field mustard plasma membrane 63.95 64.48
Bra014020.1-P Field mustard plasma membrane 62.93 64.24
CDY36017 Canola plasma membrane 62.93 64.24
AT1G44100.1 Thale cress plasma membrane 62.53 63.96
PGSC0003DMT400008650 Potato plasma membrane 59.88 63.36
CDY14972 Canola plasma membrane 60.9 62.82
Bra036939.1-P Field mustard plasma membrane 60.9 62.82
CDY47793 Canola plasma membrane 60.69 62.6
VIT_07s0031g02340.t01 Wine grape peroxisome 70.26 61.28
EES13588 Sorghum cytosol, peroxisome, plasma membrane 61.71 60.84
CDY71454 Canola golgi, peroxisome, plasma membrane 34.62 60.71
KXG23106 Sorghum cytosol, peroxisome, plasma membrane 59.47 60.58
EER97947 Sorghum golgi, peroxisome, plasma membrane 55.6 56.88
EER88513 Sorghum peroxisome 56.82 56.82
KXG20176 Sorghum plasma membrane 50.51 54.27
KXG26523 Sorghum plasma membrane 50.71 54.13
OQU76565 Sorghum plasma membrane 50.71 52.53
KXG33808 Sorghum plasma membrane 49.69 51.91
OQU87977 Sorghum plasma membrane 48.27 50.86
EES11591 Sorghum plasma membrane 48.68 50.21
EES07345 Sorghum golgi, peroxisome, plasma membrane 46.84 48.94
EES15803 Sorghum plasma membrane 47.45 48.44
Protein Annotations
MapMan:24.2.3.4.1InterPro:AA_transpt_TMUniProt:C5XEL2EnsemblPlants:EES03989ProteinID:EES03989ProteinID:EES03989.1
GO:GO:0003333GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0006810GO:GO:0008150GO:GO:0015171GO:GO:0016020GO:GO:0016021PFAM:PF01490
PANTHER:PTHR22950PANTHER:PTHR22950:SF295EnsemblPlantsGene:SORBI_3003G378800unigene:Sbi.9163TMHMM:TMhelixUniParc:UPI0001A8536F
RefSeq:XP_002458869.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr3:-:69254573..69258087
Molecular Weight (calculated)
53145.8 Da
IEP (calculated)
8.381
GRAVY (calculated)
0.486
Length
491 amino acids
Sequence
(BLAST)
001: MAENVVATYY YPTAAPAAME VCGAELGKGA SDKCFDDDGR PKRNGTMWTA SSHIITAVIG SGVLSLGWAI AQLGWVAGPA AMLLFSLVTY YTSSLLADCY
101: RSGDPSTGKR NYTYMDAVNA NLSGIKVQIC GFLQYANIVG VAIGYTIAAS ISMLAIRRAN CFHQKGHGNP CKVSSTPYMI IFGVAEIFFS QIPDFDQISW
201: LSILAAVMSF TYSSIGLGLG IVQVIANRGV QGSLTGISIG VVTPMDKVWR SLQAFGDIAF AYSYSLILIE IQDTIRAPPP SESTVMKRAT VVSVAVTTLF
301: YMLCGCMGYA AFGDGAPGNL LTGFGFYEPF WLLDVANAAI VVHLVGAYQV YCQPLFAFVE KWAAQRWPDS AFVTGEVEVP LPATRRRSCK VNLFRATWRT
401: AFVVATTVVS MLLPFFNDVV GFLGALGFWP LTVYFPVEMY VVQKKVPRWS PRWVCLQMLS LGCLVISVAA AAGSIAGIAS DLKVYRPFKS Y
Best Arabidopsis Sequence Match ( AT5G09220.1 )
(BLAST)
001: MGETAAANNH RHHHHHGHQV FDVASHDFVP PQPAFKCFDD DGRLKRTGTV WTASAHIITA VIGSGVLSLA WAIAQLGWIA GPAVMLLFSL VTLYSSTLLS
101: DCYRTGDAVS GKRNYTYMDA VRSILGGFKF KICGLIQYLN LFGIAIGYTI AASISMMAIK RSNCFHKSGG KDPCHMSSNP YMIVFGVAEI LLSQVPDFDQ
201: IWWISIVAAV MSFTYSAIGL ALGIVQVAAN GVFKGSLTGI SIGTVTQTQK IWRTFQALGD IAFAYSYSVV LIEIQDTVRS PPAESKTMKK ATKISIAVTT
301: IFYMLCGSMG YAAFGDAAPG NLLTGFGFYN PFWLLDIANA AIVVHLVGAY QVFAQPIFAF IEKSVAERYP DNDFLSKEFE IRIPGFKSPY KVNVFRMVYR
401: SGFVVTTTVI SMLMPFFNDV VGILGALGFW PLTVYFPVEM YIKQRKVEKW STRWVCLQML SVACLVISVV AGVGSIAGVM LDLKVYKPFK STY
Arabidopsis Description
AAP2Amino acid permease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q38967]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.