Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- plasma membrane 4
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
GSMUA_Achr4P10230_001 |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT5G63850.1 | GSMUA_Achr4P10230_001 | AT4G19030.1 | 21798944 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_AchrUn_... | Banana | cytosol, plasma membrane, vacuole | 76.5 | 77.24 |
GSMUA_Achr6P12890_001 | Banana | peroxisome, plasma membrane, vacuole | 88.25 | 75.88 |
GSMUA_Achr2P20670_001 | Banana | plasma membrane | 79.86 | 75.51 |
GSMUA_Achr3P02860_001 | Banana | peroxisome, plasma membrane, vacuole | 79.14 | 73.83 |
HORVU3Hr1G091110.1 | Barley | cytosol, vacuole | 20.38 | 72.03 |
Zm00001d010231_P001 | Maize | plasma membrane | 75.06 | 65.48 |
AT5G63850.1 | Thale cress | plasma membrane | 73.14 | 65.45 |
OQU78029 | Sorghum | cytosol, peroxisome, plasma membrane | 75.54 | 64.95 |
TraesCS3A01G406800.1 | Wheat | plasma membrane | 72.66 | 64.88 |
VIT_18s0001g02020.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 74.82 | 64.86 |
Bra029199.1-P | Field mustard | plasma membrane | 72.42 | 64.81 |
CDY31348 | Canola | plasma membrane | 72.42 | 64.81 |
CDY39844 | Canola | plasma membrane | 72.42 | 64.81 |
Os11t0195600-01 | Rice | cytosol, plasma membrane, vacuole | 73.62 | 64.5 |
Os12t0181500-01 | Rice | plasma membrane | 73.38 | 64.42 |
CDY43761 | Canola | plasma membrane | 71.94 | 64.38 |
TraesCS1D01G264700.1 | Wheat | golgi, peroxisome, vacuole | 75.54 | 64.29 |
Os12t0181600-01 | Rice | plasma membrane | 73.14 | 64.21 |
Bra024241.1-P | Field mustard | plasma membrane | 71.7 | 64.16 |
GSMUA_Achr1P28270_001 | Banana | peroxisome, plasma membrane, vacuole | 67.39 | 64.16 |
TraesCS1A01G264500.1 | Wheat | golgi, peroxisome, plasma membrane | 75.54 | 64.15 |
Bra015673.1-P | Field mustard | plasma membrane | 73.14 | 64.08 |
Zm00001d053143_P002 | Maize | plasma membrane | 72.42 | 63.98 |
EES03989 | Sorghum | plasma membrane | 75.3 | 63.95 |
CDX88364 | Canola | plasma membrane | 72.9 | 63.87 |
HORVU1Hr1G064970.10 | Barley | golgi, mitochondrion, peroxisome | 75.54 | 63.77 |
CDX87522 | Canola | plasma membrane | 72.66 | 63.66 |
CDX84450 | Canola | plasma membrane | 70.98 | 63.52 |
Solyc06g060110.2.1 | Tomato | plasma membrane | 71.7 | 63.48 |
CDX88365 | Canola | plasma membrane | 72.42 | 63.45 |
Zm00001d042619_P002 | Maize | plasma membrane | 75.06 | 63.36 |
Os05t0424000-01 | Rice | cytosol, plasma membrane, vacuole | 75.3 | 63.31 |
EES08162 | Sorghum | plasma membrane | 72.9 | 63.2 |
HORVU3Hr1G091120.3 | Barley | plasma membrane | 72.66 | 63.12 |
TraesCS3A01G406900.1 | Wheat | plasma membrane | 72.66 | 63.12 |
HORVU5Hr1G037660.1 | Barley | plasma membrane | 72.42 | 63.05 |
PGSC0003DMT400030727 | Potato | plasma membrane | 71.46 | 63.0 |
TraesCS5A01G115100.1 | Wheat | plasma membrane | 72.18 | 62.84 |
TraesCS5B01G116100.1 | Wheat | plasma membrane | 72.18 | 62.84 |
TraesCS5D01G125700.1 | Wheat | plasma membrane | 72.18 | 62.84 |
GSMUA_Achr8P08250_001 | Banana | cytosol, peroxisome, plasma membrane, plastid | 75.06 | 62.73 |
TraesCS3B01G441200.1 | Wheat | plasma membrane | 72.18 | 62.71 |
Os01t0882800-01 | Rice | plasma membrane | 73.14 | 62.5 |
TraesCS3A01G407000.1 | Wheat | plasma membrane | 71.94 | 62.5 |
Zm00001d023592_P001 | Maize | plasma membrane | 71.94 | 62.5 |
CDX69918 | Canola | plasma membrane | 72.66 | 62.47 |
Zm00001d023593_P001 | Maize | plasma membrane | 71.46 | 62.47 |
EES16764 | Sorghum | plasma membrane | 72.18 | 62.45 |
TraesCS3D01G402200.1 | Wheat | plasma membrane | 72.18 | 62.45 |
TraesCS3B01G441100.1 | Wheat | plasma membrane | 71.7 | 62.29 |
Bra009371.1-P | Field mustard | plasma membrane | 72.42 | 62.27 |
CDY21569 | Canola | plasma membrane | 72.42 | 62.27 |
Bra006016.1-P | Field mustard | plasma membrane | 72.66 | 62.22 |
CDX78353 | Canola | plasma membrane | 72.66 | 62.22 |
CDX81121 | Canola | plasma membrane | 72.66 | 62.22 |
EES16761 | Sorghum | plasma membrane | 71.22 | 62.13 |
AT1G77380.1 | Thale cress | plasma membrane | 70.74 | 61.97 |
AT5G09220.1 | Thale cress | cytosol, peroxisome, plasma membrane | 73.14 | 61.87 |
EES15765 | Sorghum | plasma membrane | 70.98 | 61.8 |
EES16763 | Sorghum | plasma membrane | 71.22 | 61.75 |
TraesCS4A01G215300.1 | Wheat | plasma membrane | 71.7 | 61.52 |
HORVU4Hr1G043680.3 | Barley | plasma membrane | 71.94 | 61.48 |
TraesCS4B01G100800.1 | Wheat | plasma membrane | 71.7 | 61.4 |
PGSC0003DMT400015426 | Potato | plasma membrane | 70.26 | 61.17 |
TraesCS3D01G402300.1 | Wheat | plasma membrane | 72.18 | 61.05 |
TraesCS4D01G097400.1 | Wheat | plasma membrane | 71.22 | 60.99 |
VIT_10s0116g01380.t01 | Wine grape | plasma membrane | 66.19 | 60.93 |
Zm00001d023596_P001 | Maize | cytosol, peroxisome, plasma membrane | 70.26 | 60.79 |
Zm00001d023603_P001 | Maize | plasma membrane | 53.48 | 60.27 |
KRH53283 | Soybean | golgi, peroxisome, plasma membrane | 70.26 | 60.16 |
GSMUA_Achr8P32600_001 | Banana | plasma membrane | 78.66 | 59.96 |
KRH64623 | Soybean | cytosol, peroxisome, plasma membrane | 70.02 | 59.96 |
Solyc11g005070.1.1 | Tomato | plasma membrane | 68.35 | 59.87 |
PGSC0003DMT400043280 | Potato | plasma membrane | 67.15 | 59.83 |
CDY71454 | Canola | golgi, peroxisome, plasma membrane | 39.81 | 59.29 |
KRH17988 | Soybean | plasma membrane | 67.87 | 59.08 |
KRH16402 | Soybean | plasma membrane | 67.39 | 58.66 |
KXG23123 | Sorghum | mitochondrion, plastid | 70.5 | 58.57 |
HORVU2Hr1G084780.1 | Barley | extracellular | 32.13 | 58.52 |
Zm00001d004705_P001 | Maize | plasma membrane | 63.55 | 58.37 |
GSMUA_Achr2P11300_001 | Banana | plasma membrane | 71.46 | 58.09 |
EES08159 | Sorghum | cytosol, peroxisome, plasma membrane | 67.63 | 58.02 |
Bra014020.1-P | Field mustard | plasma membrane | 66.91 | 58.0 |
CDY36017 | Canola | plasma membrane | 66.67 | 57.8 |
HORVU3Hr1G091020.2 | Barley | mitochondrion | 72.9 | 57.25 |
Zm00001d041842_P002 | Maize | mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 70.26 | 57.12 |
CDY60629 | Canola | plasma membrane | 56.83 | 57.11 |
TraesCS3B01G441300.2 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 72.18 | 56.69 |
Bra032199.1-P | Field mustard | plasma membrane | 66.19 | 56.67 |
CDY43854 | Canola | plasma membrane | 66.19 | 56.67 |
TraesCS1B01G275200.1 | Wheat | mitochondrion | 76.02 | 56.61 |
TraesCS5B01G120000.1 | Wheat | plasma membrane | 63.55 | 56.26 |
TraesCS5A01G113300.1 | Wheat | cytosol, peroxisome, plasma membrane | 63.79 | 56.12 |
HORVU3Hr1G091070.1 | Barley | cytosol | 61.63 | 56.11 |
PGSC0003DMT400008650 | Potato | plasma membrane | 62.35 | 56.03 |
CDY47793 | Canola | plasma membrane | 63.55 | 55.67 |
Bra036939.1-P | Field mustard | plasma membrane | 63.31 | 55.46 |
CDY14972 | Canola | plasma membrane | 63.31 | 55.46 |
VIT_07s0031g02340.t01 | Wine grape | peroxisome | 74.82 | 55.42 |
AT1G44100.1 | Thale cress | plasma membrane | 63.79 | 55.42 |
TraesCS5D01G129000.1 | Wheat | cytosol, peroxisome, plasma membrane | 60.91 | 55.1 |
KXG23106 | Sorghum | cytosol, peroxisome, plasma membrane | 61.39 | 53.11 |
Zm00001d050211_P001 | Maize | peroxisome | 55.4 | 50.88 |
TraesCS2B01G367000.1 | Wheat | plasma membrane | 59.47 | 50.1 |
EES13588 | Sorghum | cytosol, peroxisome, plasma membrane | 59.71 | 50.0 |
GSMUA_Achr4P32180_001 | Banana | plasma membrane | 56.35 | 48.86 |
TraesCS7D01G388300.1 | Wheat | plasma membrane | 61.39 | 48.58 |
GSMUA_Achr10P... | Banana | plasma membrane | 52.52 | 48.13 |
GSMUA_Achr5P23910_001 | Banana | plasma membrane | 52.28 | 47.39 |
GSMUA_Achr9P08360_001 | Banana | plasma membrane | 52.28 | 47.08 |
TraesCS3A01G065600.1 | Wheat | plasma membrane | 51.08 | 46.3 |
TraesCS2D01G346500.1 | Wheat | plasma membrane | 55.64 | 46.22 |
GSMUA_Achr3P10920_001 | Banana | plasma membrane | 51.56 | 46.14 |
HORVU2Hr1G084710.1 | Barley | plasma membrane | 40.29 | 45.04 |
GSMUA_Achr8P08340_001 | Banana | plasma membrane | 49.64 | 44.9 |
GSMUA_Achr6P29090_001 | Banana | mitochondrion, plasma membrane | 53.0 | 44.74 |
Os12t0195100-00 | Rice | plastid | 44.36 | 37.3 |
TraesCS2D01G347000.2 | Wheat | cytosol, plasma membrane, vacuole | 43.17 | 34.75 |
TraesCS2A01G348600.2 | Wheat | cytosol, plasma membrane, vacuole | 42.45 | 34.44 |
GSMUA_Achr5P01300_001 | Banana | extracellular, plasma membrane, plastid | 49.4 | 18.93 |
Protein Annotations
EnsemblPlants:GSMUA_Achr10P16090_001 | EnsemblPlants:GSMUA_Achr10T16090_001 | EnsemblPlantsGene:GSMUA_Achr10G16090_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
InterPro:AA_transpt_TM | PANTHER:PTHR22950 | PANTHER:PTHR22950:SF295 | PFAM:PF01490 | SEG:seg | TMHMM:TMhelix |
UniParc:UPI000294974C | UniProt:M0RIN4 | MapMan:24.2.3.4.1 | : | : | : |
Description
Amino acid permease 4 [Source:GMGC_GENE;Acc:GSMUA_Achr10G16090_001]
Coordinates
chr10:+:23752255..23755061
Molecular Weight (calculated)
45759.0 Da
IEP (calculated)
8.751
GRAVY (calculated)
0.439
Length
417 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVSVELSHG NQLQGLGKCY DDDGRLKRSG TFWTASAHIV TAVIGSGVLS LAWAIAQLGW VAGPVVMLLF SFVTYYTSTL LADCYRSGDP DTGKRNYNYM
101: DAVHAYLGGL KVKLCGCIQY ANLFGVAVGY TIAASISMMA IRRSNCFHEK GHKNPCHTSS NPYMIMFGVV EIFLSQIPDF DQIWWLSIVA AVMSFTYSSI
201: GLALGIVQAI DNKGFKGSLT GISIGVISPT QKIWRSLQAF GDIAFAYSFS LVLIEIQDTI KSPPPSEAKV MKKASLLSII VTTLFYMLCG CMGYAAFGDK
301: APGNLLTGFG FYNPYWLLDI ANAAIVVHLV GAYQVFSQPL FAFIEKWALK TWPDATFISK EIAMYIVQKR IPRWSTRWVC LQMLSSACLV ITVAAVIGSV
401: AGIVTDLKVY RPFKTSY
101: DAVHAYLGGL KVKLCGCIQY ANLFGVAVGY TIAASISMMA IRRSNCFHEK GHKNPCHTSS NPYMIMFGVV EIFLSQIPDF DQIWWLSIVA AVMSFTYSSI
201: GLALGIVQAI DNKGFKGSLT GISIGVISPT QKIWRSLQAF GDIAFAYSFS LVLIEIQDTI KSPPPSEAKV MKKASLLSII VTTLFYMLCG CMGYAAFGDK
301: APGNLLTGFG FYNPYWLLDI ANAAIVVHLV GAYQVFSQPL FAFIEKWALK TWPDATFISK EIAMYIVQKR IPRWSTRWVC LQMLSSACLV ITVAAVIGSV
401: AGIVTDLKVY RPFKTSY
001: MMDAYNNPSA VESGDAAVKS VDDDGREKRT GTFWTASAHI ITAVIGSGVL SLAWAIAQLG WVAGTTVLVA FAIITYYTST LLADCYRSPD SITGTRNYNY
101: MGVVRSYLGG KKVQLCGVAQ YVNLVGVTIG YTITASISLV AIGKSNCYHD KGHKAKCSVS NYPYMAAFGI VQIILSQLPN FHKLSFLSII AAVMSFSYAS
201: IGIGLAIATV ASGKIGKTEL TGTVIGVDVT ASEKVWKLFQ AIGDIAFSYA FTTILIEIQD TLRSSPPENK VMKRASLVGV STTTVFYILC GCIGYAAFGN
301: QAPGDFLTDF GFYEPYWLID FANACIALHL IGAYQVYAQP FFQFVEENCN KKWPQSNFIN KEYSSKVPLL GKCRVNLFRL VWRTCYVVLT TFVAMIFPFF
401: NAILGLLGAF AFWPLTVYFP VAMHIAQAKV KKYSRRWLAL NLLVLVCLIV SALAAVGSII GLINSVKSYK PFKNLD
101: MGVVRSYLGG KKVQLCGVAQ YVNLVGVTIG YTITASISLV AIGKSNCYHD KGHKAKCSVS NYPYMAAFGI VQIILSQLPN FHKLSFLSII AAVMSFSYAS
201: IGIGLAIATV ASGKIGKTEL TGTVIGVDVT ASEKVWKLFQ AIGDIAFSYA FTTILIEIQD TLRSSPPENK VMKRASLVGV STTTVFYILC GCIGYAAFGN
301: QAPGDFLTDF GFYEPYWLID FANACIALHL IGAYQVYAQP FFQFVEENCN KKWPQSNFIN KEYSSKVPLL GKCRVNLFRL VWRTCYVVLT TFVAMIFPFF
401: NAILGLLGAF AFWPLTVYFP VAMHIAQAKV KKYSRRWLAL NLLVLVCLIV SALAAVGSII GLINSVKSYK PFKNLD
Arabidopsis Description
AAP8amino acid permease 8 [Source:TAIR;Acc:AT1G10010]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.