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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 5
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400015426 Potato plasma membrane 94.75 94.15
Solyc06g060110.2.1 Tomato plasma membrane 80.88 81.74
VIT_18s0001g02020.t01 Wine grape cytosol, peroxisome, plasma membrane 75.0 74.22
CDX88364 Canola plasma membrane 71.85 71.85
GSMUA_AchrUn_... Banana cytosol, plasma membrane, vacuole 62.18 71.67
Bra015673.1-P Field mustard plasma membrane 71.64 71.64
CDX87522 Canola plasma membrane 71.64 71.64
CDX88365 Canola plasma membrane 71.43 71.43
AT1G77380.1 Thale cress plasma membrane 70.8 70.8
KRH53283 Soybean golgi, peroxisome, plasma membrane 71.43 69.82
KRH17988 Soybean plasma membrane 70.17 69.73
KRH64623 Soybean cytosol, peroxisome, plasma membrane 71.22 69.61
GSMUA_Achr1P28270_001 Banana peroxisome, plasma membrane, vacuole 63.87 69.41
KRH16402 Soybean plasma membrane 69.33 68.89
Zm00001d010231_P001 Maize plasma membrane 68.7 68.41
GSMUA_Achr10P... Banana plasma membrane 59.87 68.35
TraesCS1D01G264700.1 Wheat golgi, peroxisome, vacuole 70.17 68.16
TraesCS3A01G406800.1 Wheat plasma membrane 66.81 68.09
OQU78029 Sorghum cytosol, peroxisome, plasma membrane 69.33 68.04
HORVU3Hr1G091110.1 Barley cytosol, vacuole 16.81 67.8
GSMUA_Achr3P02860_001 Banana peroxisome, plasma membrane, vacuole 63.24 67.34
GSMUA_Achr6P12890_001 Banana peroxisome, plasma membrane, vacuole 68.49 67.22
GSMUA_Achr2P20670_001 Banana plasma membrane 62.18 67.12
TraesCS3A01G406900.1 Wheat plasma membrane 67.65 67.08
HORVU3Hr1G091120.3 Barley plasma membrane 67.65 67.08
TraesCS1A01G264500.1 Wheat golgi, peroxisome, plasma membrane 69.12 67.01
TraesCS3B01G441100.1 Wheat plasma membrane 67.44 66.88
HORVU1Hr1G064970.10 Barley golgi, mitochondrion, peroxisome 69.33 66.8
TraesCS3A01G407000.1 Wheat plasma membrane 67.23 66.67
TraesCS3B01G441200.1 Wheat plasma membrane 67.23 66.67
TraesCS3D01G402200.1 Wheat plasma membrane 67.23 66.39
Zm00001d053143_P002 Maize plasma membrane 65.76 66.31
AT1G44100.1 Thale cress plasma membrane 66.81 66.25
Os01t0882800-01 Rice plasma membrane 67.86 66.19
Os11t0195600-01 Rice cytosol, plasma membrane, vacuole 66.18 66.18
Os05t0424000-01 Rice cytosol, plasma membrane, vacuole 68.91 66.13
CDY36017 Canola plasma membrane 66.81 66.11
CDY60629 Canola plasma membrane 57.56 66.02
Bra014020.1-P Field mustard plasma membrane 66.39 65.7
EES03989 Sorghum plasma membrane 67.65 65.58
HORVU4Hr1G043680.3 Barley plasma membrane 67.23 65.57
Zm00001d042619_P002 Maize plasma membrane 67.86 65.38
CDY43854 Canola plasma membrane 66.81 65.3
Bra032199.1-P Field mustard plasma membrane 66.81 65.3
TraesCS4B01G100800.1 Wheat plasma membrane 66.6 65.09
TraesCS4A01G215300.1 Wheat plasma membrane 66.39 65.02
EES16764 Sorghum plasma membrane 65.76 64.94
TraesCS3D01G402300.1 Wheat plasma membrane 67.23 64.91
TraesCS4D01G097400.1 Wheat plasma membrane 66.39 64.89
Os12t0181500-01 Rice plasma membrane 64.71 64.84
Bra036939.1-P Field mustard plasma membrane 64.71 64.71
CDY14972 Canola plasma membrane 64.71 64.71
Os12t0181600-01 Rice plasma membrane 64.5 64.63
Zm00001d023603_P001 Maize plasma membrane 50.21 64.59
HORVU5Hr1G037660.1 Barley plasma membrane 64.71 64.3
TraesCS5D01G125700.1 Wheat plasma membrane 64.71 64.3
TraesCS5A01G115100.1 Wheat plasma membrane 64.71 64.3
CDY47793 Canola plasma membrane 64.29 64.29
CDY71454 Canola golgi, peroxisome, plasma membrane 37.82 64.29
TraesCS5B01G116100.1 Wheat plasma membrane 64.5 64.09
EES08162 Sorghum plasma membrane 64.71 64.03
GSMUA_Achr8P08250_001 Banana cytosol, peroxisome, plasma membrane, plastid 67.02 63.93
EES16763 Sorghum plasma membrane 64.29 63.62
Zm00001d023593_P001 Maize plasma membrane 63.66 63.52
EES15765 Sorghum plasma membrane 63.87 63.47
EES16761 Sorghum plasma membrane 63.66 63.39
Zm00001d023592_P001 Maize plasma membrane 63.87 63.33
Zm00001d023596_P001 Maize cytosol, peroxisome, plasma membrane 64.08 63.28
GSMUA_Achr8P32600_001 Banana plasma membrane 70.8 61.61
HORVU3Hr1G091070.1 Barley cytosol 58.61 60.92
HORVU3Hr1G091020.2 Barley mitochondrion 67.65 60.64
TraesCS3B01G441300.2 Wheat cytosol, peroxisome, plasma membrane, plastid 67.44 60.45
KXG23123 Sorghum mitochondrion, plastid 63.45 60.16
EES08159 Sorghum cytosol, peroxisome, plasma membrane 61.34 60.08
Zm00001d004705_P001 Maize plasma membrane 57.14 59.91
TraesCS1B01G275200.1 Wheat mitochondrion 69.96 59.46
HORVU2Hr1G084780.1 Barley extracellular 28.36 58.95
Solyc04g077050.2.1 Tomato plasma membrane 59.24 58.63
Zm00001d041842_P002 Maize mitochondrion, peroxisome, plasma membrane, plastid, vacuole 63.03 58.48
TraesCS5B01G120000.1 Wheat plasma membrane 57.35 57.96
TraesCS5A01G113300.1 Wheat cytosol, peroxisome, plasma membrane 57.14 57.38
TraesCS5D01G129000.1 Wheat cytosol, peroxisome, plasma membrane 55.04 56.83
Solyc01g106800.2.1 Tomato plasma membrane 55.25 56.56
Zm00001d050211_P001 Maize peroxisome 53.57 56.17
KXG23106 Sorghum cytosol, peroxisome, plasma membrane 56.51 55.81
EES13588 Sorghum cytosol, peroxisome, plasma membrane 57.35 54.82
Solyc12g088190.1.1 Tomato plasma membrane 56.09 54.71
TraesCS3A01G065600.1 Wheat plasma membrane 52.52 54.35
TraesCS2B01G367000.1 Wheat plasma membrane 55.46 53.33
Solyc07g066010.2.1 Tomato plasma membrane 50.21 52.41
TraesCS7D01G388300.1 Wheat plasma membrane 57.14 51.61
TraesCS2D01G346500.1 Wheat plasma membrane 52.1 49.4
HORVU2Hr1G084710.1 Barley plasma membrane 38.45 49.06
Solyc07g066020.2.1 Tomato plasma membrane 47.48 48.09
Os12t0195100-00 Rice plastid 42.86 41.13
TraesCS2D01G347000.2 Wheat cytosol, plasma membrane, vacuole 39.08 35.91
TraesCS2A01G348600.2 Wheat cytosol, plasma membrane, vacuole 38.03 35.21
Protein Annotations
EMBL:AF013278EnsemblPlants:Solyc11g005070.1.1EnsemblPlantsGene:Solyc11g005070.1GO:GO:0003333GO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0015171
GO:GO:0016020GO:GO:0016021InterPro:AA_transpt_TMPANTHER:PTHR22950PANTHER:PTHR22950:SF456PFAM:PF01490
SEG:segTMHMM:TMhelixUniParc:UPI00000ADC98UniProt:Q8GZV5MapMan:24.2.3.4.1:
Description
Amino acid transporter [Source:UniProtKB/TrEMBL;Acc:Q8GZV5]
Coordinates
chr11:-:61813..63629
Molecular Weight (calculated)
52598.5 Da
IEP (calculated)
8.763
GRAVY (calculated)
0.554
Length
476 amino acids
Sequence
(BLAST)
001: MGDSTNFAAK HPVSINITES KLFDDDGRIK RSGSVWTASA HIITAVIGSG VLSLAWAVAQ LGWIAGPIVM LLFSFVTYYT SSLLSDCYRS GDPLFGKRNY
101: TYMDVVQANL SGLQVKICGW IQYVNLFGVA IGYTIASSIS LMAVKRSDCF HKHGHKAPCL QPNTPYMIIF GVIEIIFSQI PDFDQIWWLS IVAAVMSFTY
201: STIGLGLGIA HVAETGKIGG SLTGVSIGTV TEMQKVWRTF QALGAIAFAY SYSLILIEIQ DTIKSPPSEA KTMKNATIIS VSVTTVFYML CGCFGYAAFG
301: DHAPDNLLTG FGFYDPYWLL DIANIAIFVH LVGAYQVYCQ PLFAFIEKTA AEWYPNSKII TKNISVPIPG FKSYNIYLFR LVWRTIFVII STIISMLLPF
401: FSDIVGILGA FGFWPLTVYY PVEIYIVQKK IPKWSRKWFG LQILSVTCLI VSIAAAVGSF AGVVSDLKVY KPFKFT
Best Arabidopsis Sequence Match ( AT1G77380.1 )
(BLAST)
001: MVQNHQTVLA VDMPQTGGSK YLDDDGKNKR TGSVWTASAH IITAVIGSGV LSLAWATAQL GWLAGPVVML LFSAVTYFTS SLLAACYRSG DPISGKRNYT
101: YMDAVRSNLG GVKVTLCGIV QYLNIFGVAI GYTIASAISM MAIKRSNCFH KSGGKDPCHM NSNPYMIAFG LVQILFSQIP DFDQLWWLSI LAAVMSFTYS
201: SAGLALGIAQ VVVNGKVKGS LTGISIGAVT ETQKIWRTFQ ALGDIAFAYS YSIILIEIQD TVKSPPSEEK TMKKATLVSV SVTTMFYMLC GCMGYAAFGD
301: LSPGNLLTGF GFYNPYWLLD IANAAIVIHL IGAYQVYCQP LFAFIEKQAS IQFPDSEFIA KDIKIPIPGF KPLRLNVFRL IWRTVFVIIT TVISMLLPFF
401: NDVVGLLGAL GFWPLTVYFP VEMYIAQKKI PRWSTRWVCL QVFSLGCLVV SIAAAAGSIA GVLLDLKSYK PFRSEY
Arabidopsis Description
AAP3ATAAP3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3U1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.