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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • plasma membrane 5
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400057311 Potato plasma membrane 97.02 96.61
VIT_19s0015g01290.t01 Wine grape plasma membrane 58.94 58.69
Solyc07g066010.2.1 Tomato plasma membrane 55.53 57.24
KRH46483 Soybean plasma membrane 39.15 56.27
GSMUA_Achr3P10920_001 Banana plasma membrane 55.74 56.22
GSMUA_Achr5P23910_001 Banana plasma membrane 54.89 56.09
AT5G23810.1 Thale cress plasma membrane 55.53 55.89
KRG98402 Soybean plasma membrane 54.68 55.63
TraesCS2D01G331800.2 Wheat cytosol, peroxisome, plasma membrane 54.47 55.05
TraesCS2A01G331100.1 Wheat cytosol, peroxisome, plasma membrane 54.47 55.05
Zm00001d003343_P001 Maize plasma membrane 53.62 55.02
KXG26523 Sorghum plasma membrane 53.83 55.0
Os04t0470700-01 Rice plasma membrane 54.47 54.94
TraesCS2B01G351100.2 Wheat cytosol, peroxisome, plasma membrane 54.26 54.84
HORVU2Hr1G081790.1 Barley cytosol, peroxisome, plasma membrane 54.04 54.62
Bra026481.1-P Field mustard plasma membrane 54.26 54.6
Os02t0722400-01 Rice endoplasmic reticulum, plasma membrane 52.34 54.42
CDX87155 Canola plasma membrane 40.43 53.98
CDY16869 Canola plasma membrane 53.83 53.83
EES11591 Sorghum plasma membrane 53.62 52.94
KRH14166 Soybean plasma membrane 50.21 52.56
KRH73962 Soybean plasma membrane 52.13 51.36
EES07345 Sorghum golgi, peroxisome, plasma membrane 51.06 51.06
HORVU6Hr1G071840.3 Barley endoplasmic reticulum, golgi, plasma membrane 50.64 50.96
TraesCS6A01G285300.1 Wheat endoplasmic reticulum, golgi, mitochondrion, peroxisome 50.43 50.75
Solyc06g060110.2.1 Tomato plasma membrane 50.64 50.53
TraesCS6A01G285200.1 Wheat golgi, peroxisome, plasma membrane 50.0 50.21
TraesCS6B01G314000.1 Wheat golgi, peroxisome, plasma membrane 50.0 50.0
TraesCS6D01G265600.1 Wheat golgi, peroxisome, plasma membrane 50.0 49.79
TraesCS6D01G265800.1 Wheat plasma membrane 51.06 49.18
TraesCS6B01G314200.1 Wheat cytosol, peroxisome, plasma membrane 51.06 48.68
TraesCS2B01G527800.1 Wheat plasma membrane 49.15 47.73
TraesCS2D01G500000.1 Wheat plasma membrane 48.94 47.62
Solyc11g005070.1.1 Tomato plasma membrane 48.09 47.48
TraesCS2A01G499800.1 Wheat plasma membrane 48.3 46.8
Zm00001d017880_P006 Maize plasma membrane 47.87 45.82
Solyc01g106800.2.1 Tomato plasma membrane 45.11 45.59
Zm00001d001984_P001 Maize mitochondrion 53.62 45.41
Os04t0659800-00 Rice plasma membrane 50.43 43.81
HORVU2Hr1G111140.3 Barley golgi 46.17 43.75
Solyc04g077050.2.1 Tomato plasma membrane 44.68 43.66
Solyc12g088190.1.1 Tomato plasma membrane 44.89 43.24
HORVU6Hr1G071810.8 Barley golgi, peroxisome, plasma membrane 42.98 38.33
Zm00001d025665_P002 Maize plasma membrane 52.77 33.74
Protein Annotations
EnsemblPlants:Solyc07g066020.2.1EnsemblPlantsGene:Solyc07g066020.2GO:GO:0003333GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0005623GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0015171GO:GO:0016020
GO:GO:0016021InterPro:AA_transpt_TMPANTHER:PTHR22950PANTHER:PTHR22950:SF228PFAM:PF01490SEG:seg
TMHMM:TMhelixUniParc:UPI000276B088UniProt:K4CHS8MapMan:24.2.3.4.1::
Description
No Description!
Coordinates
chr7:+:67557049..67561355
Molecular Weight (calculated)
51991.9 Da
IEP (calculated)
8.945
GRAVY (calculated)
0.472
Length
470 amino acids
Sequence
(BLAST)
001: MGLDEESDSQ MPFLDPNYVS SSSSQSSKLA LKRTGNEWTA LAHLITAVIG SGVLSLAWSM AQLGWVAGPL TMLVFACVSL TSVFLLCNCY KSPDPETGPD
101: RNGCYLDAVQ KILGKRNAWF CGIAVRINFI KLAIIYTITS ASSIQAIQKS NCYHDQGHKA TCGYESTRYM VIFGLIQVIV SQIPDFPNMK WLSVVAAVMS
201: FTYSIIGSAL GLAKVIENGE IKGSITGLPS STAAEKVWLV AQALGNIAFA FPFSLIFLEV QDTLKAPPPE KITMKKVSIM TSCITTFFYL CCGGFGYAAF
301: GNSTPGNLLT GFGFYEPYWL VDFANACVIL HLVGGYQVFS QPIFAEVERW FARKFPDSKF VHKNHTLKPL SMLPFSLNFM RLFFRTAYVA IMTGIAVLFP
401: YFNQVVGVSG AITFWPIVVY FPVEMYLTQK RIESWKSKAI MLRVFTMVCL VVILYAFVGS IRGVIVARFR
Best Arabidopsis Sequence Match ( AT5G23810.1 )
(BLAST)
001: MDIKEDDESR VITPTELQLH DSVTARTGTL WTAVAHIITG VIGAGVLSLA WATAELGWIA GPAALIAFAG VTLLSAFLLS DCYRFPDPNN GPLRLNSYSQ
101: AVKLYLGKKN EIVCGVVVYI SLFGCGIAYT IVIATCSRAI MKSNCYHRNG HNATCSYGDN NNYFMVLFGL TQIFMSQIPN FHNMVWLSLV AAIMSFTYSF
201: IGIGLALGKI IENRKIEGSI RGIPAENRGE KVWIVFQALG NIAFSYPFSI ILLEIQDTLR SPPAEKQTMK KASTVAVFIQ TFFFFCCGCF GYAAFGDSTP
301: GNLLTGFGFY EPFWLVDFAN ACIVLHLVGG YQVYSQPIFA AAERSLTKKY PENKFIARFY GFKLPLLRGE TVRLNPMRMC LRTMYVLITT GVAVMFPYFN
401: EVLGVVGALA FWPLAVYFPV EMCILQKKIR SWTRPWLLLR GFSFVCLLVC LLSLVGSIYG LVGAKFG
Arabidopsis Description
AAP7Probable amino acid permease 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FF99]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.