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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, peroxisome, plasma membrane
Any Predictor:golgi, peroxisome, plasma membrane
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G314000.1 Wheat golgi, peroxisome, plasma membrane 95.34 95.74
TraesCS6A01G285200.1 Wheat golgi, peroxisome, plasma membrane 93.43 94.23
TraesCS6D01G265800.1 Wheat plasma membrane 78.6 76.02
Os02t0722400-01 Rice endoplasmic reticulum, plasma membrane 69.28 72.35
EES07345 Sorghum golgi, peroxisome, plasma membrane 71.61 71.91
HORVU6Hr1G071810.8 Barley golgi, peroxisome, plasma membrane 76.27 68.31
Zm00001d017880_P006 Maize plasma membrane 70.13 67.41
GSMUA_Achr3P10920_001 Banana plasma membrane 57.42 58.15
TraesCS2D01G331800.2 Wheat cytosol, peroxisome, plasma membrane 54.87 55.7
VIT_19s0015g01300.t01 Wine grape plasma membrane 52.54 54.15
VIT_19s0015g01290.t01 Wine grape plasma membrane 54.03 54.03
CDX87155 Canola plasma membrane 40.04 53.69
KRH14179 Soybean plasma membrane 42.58 53.17
KRG98405 Soybean plasma membrane 51.48 52.71
KRG98404 Soybean plasma membrane 51.06 52.28
KRH46488 Soybean plasma membrane 51.06 52.28
KRH73957 Soybean plasma membrane 50.85 52.06
Solyc07g066010.2.1 Tomato plasma membrane 49.79 51.54
PGSC0003DMT400057313 Potato plasma membrane 49.79 51.54
Bra026481.1-P Field mustard plasma membrane 50.64 51.18
CDY16869 Canola plasma membrane 50.64 50.85
AT5G23810.1 Thale cress plasma membrane 50.21 50.75
KRG93981 Soybean plasma membrane 32.63 50.33
Solyc07g066020.2.1 Tomato plasma membrane 49.79 50.0
PGSC0003DMT400057311 Potato plasma membrane 49.79 49.79
TraesCS2D01G500000.1 Wheat plasma membrane 50.42 49.28
KRG98402 Soybean plasma membrane 47.46 48.48
KRH46483 Soybean plasma membrane 33.05 47.71
KRH14166 Soybean plasma membrane 44.49 46.77
KRH73962 Soybean plasma membrane 46.4 45.91
TraesCS3D01G402200.1 Wheat plasma membrane 46.4 45.44
TraesCS2D01G470100.1 Wheat plasma membrane 39.62 44.84
TraesCS5D01G125700.1 Wheat plasma membrane 45.13 44.47
TraesCS3D01G402300.1 Wheat plasma membrane 46.4 44.42
TraesCS4D01G097400.1 Wheat plasma membrane 45.76 44.35
TraesCS2D01G256000.1 Wheat plasma membrane 44.92 43.89
TraesCS5D01G129000.1 Wheat cytosol, peroxisome, plasma membrane 42.8 43.82
TraesCS1D01G264700.1 Wheat golgi, peroxisome, vacuole 45.13 43.47
TraesCS7D01G196100.1 Wheat plasma membrane 43.43 43.34
TraesCS3D01G381400.1 Wheat plasma membrane 43.01 43.1
TraesCS7D01G366000.1 Wheat plasma membrane 41.1 42.64
TraesCS2D01G346500.1 Wheat plasma membrane 44.07 41.43
TraesCS7D01G366200.1 Wheat peroxisome 43.01 41.43
TraesCS7D01G189000.1 Wheat plasma membrane 42.16 40.78
TraesCS6D01G363900.1 Wheat plasma membrane 36.44 38.05
TraesCS3D01G381500.1 Wheat plasma membrane 41.53 37.48
TraesCS7D01G388300.1 Wheat plasma membrane 41.74 37.38
TraesCS2D01G470800.1 Wheat plasma membrane 29.66 37.23
TraesCS2D01G347000.2 Wheat cytosol, plasma membrane, vacuole 30.72 27.99
Protein Annotations
EnsemblPlants:TraesCS6D01G265600.1EnsemblPlantsGene:TraesCS6D01G265600InterPro:AA_transpt_TMPANTHER:PTHR22950PANTHER:PTHR22950:SF228PFAM:PF01490
SEG:segTMHMM:TMhelixMapMan:24.2.3.4.1:::
Description
No Description!
Coordinates
chr6D:+:375090091..375097316
Molecular Weight (calculated)
50952.8 Da
IEP (calculated)
8.433
GRAVY (calculated)
0.421
Length
472 amino acids
Sequence
(BLAST)
001: MGGRGGDPQT GPLLEKLPEP SCSSSEPEEH PVKRTGTVWT ASAHIITAVV GSGVLSLAWS VAQLGWVGGA AAIVFFAGVT VVQSSLLAEC YVSRGDPERG
101: GLIRNKSYMN AVRFYLGERR QMLSGFFLSI SLFGSGVVYT LTTATSMRAI HEANRYGREG QQQGAPFSTA TAGGSDVYYM LLFGLAQAVL SQIPDFHNMA
201: WLSVFAAVMS FFYSFVGFGL GAAKVIENGV IKGGIGGIPL ASPMQKVWRV AQSLGDIAFA YPYTLVLLEI EDTLRSPPAE SITMKAASRA SIAITTFFYL
301: GCGCFGYAAF GDGTPGNLLT GFGEPYWLID LANLCVVLHL LGGYQLYSQP AFALVERRFG AEAWVVEVPL PLLRWRRSVN VFRLCFRTAY VVAVTAVAVW
401: YPYFNQVVGL IGAFTFWPLD IHFPVQMYLA QNKVAPWTTR WLAIQAFSAT CLLVAVFASV GSAVGVFGPN RS
Best Arabidopsis Sequence Match ( AT1G44100.1 )
(BLAST)
001: MVVQNVQDLD VLPKHSSDSF DDDGRPKRTG TVWTASAHII TAVIGSGVLS LAWAVAQIGW IGGPVAMLLF SFVTFYTSTL LCSCYRSGDS VTGKRNYTYM
101: DAIHSNLGGI KVKVCGVVQY VNLFGTAIGY TIASAISLVA IQRTSCQQMN GPNDPCHVNG NVYMIAFGIV QIIFSQIPDF DQLWWLSIVA AVMSFAYSAI
201: GLGLGVSKVV ENKEIKGSLT GVTVGTVTLS GTVTSSQKIW RTFQSLGNIA FAYSYSMILI EIQDTVKSPP AEVNTMRKAT FVSVAVTTVF YMLCGCVGYA
301: AFGDNAPGNL LAHGGFRNPY WLLDIANLAI VIHLVGAYQV YCQPLFAFVE KEASRRFPES EFVTKEIKIQ LFPGKPFNLN LFRLVWRTFF VMTTTLISML
401: MPFFNDVVGL LGAIGFWPLT VYFPVEMYIA QKNVPRWGTK WVCLQVLSVT CLFVSVAAAA GSVIGIVSDL KVYKPFQSEF
Arabidopsis Description
AAP5Amino acid permease 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GUM3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.