Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- golgi 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G314000.1 | Wheat | golgi, peroxisome, plasma membrane | 94.02 | 93.62 |
| TraesCS6D01G265600.1 | Wheat | golgi, peroxisome, plasma membrane | 94.23 | 93.43 |
| TraesCS6A01G285300.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, peroxisome | 78.42 | 78.59 |
| EES07345 | Sorghum | golgi, peroxisome, plasma membrane | 72.86 | 72.55 |
| Os02t0722400-01 | Rice | endoplasmic reticulum, plasma membrane | 69.66 | 72.12 |
| Zm00001d017880_P006 | Maize | plasma membrane | 71.15 | 67.82 |
| HORVU6Hr1G071810.8 | Barley | golgi, peroxisome, plasma membrane | 75.85 | 67.36 |
| GSMUA_Achr3P10920_001 | Banana | plasma membrane | 57.05 | 57.3 |
| TraesCS2A01G331100.1 | Wheat | cytosol, peroxisome, plasma membrane | 55.98 | 56.34 |
| VIT_19s0015g01300.t01 | Wine grape | plasma membrane | 52.99 | 54.15 |
| KRH14179 | Soybean | plasma membrane | 43.59 | 53.97 |
| CDX87155 | Canola | plasma membrane | 40.17 | 53.41 |
| VIT_19s0015g01290.t01 | Wine grape | plasma membrane | 53.42 | 52.97 |
| KRG98405 | Soybean | plasma membrane | 52.14 | 52.93 |
| KRH73957 | Soybean | plasma membrane | 51.71 | 52.49 |
| KRH46488 | Soybean | plasma membrane | 51.5 | 52.28 |
| PGSC0003DMT400057313 | Potato | plasma membrane | 50.64 | 51.97 |
| KRG98404 | Soybean | plasma membrane | 51.07 | 51.84 |
| Solyc07g066010.2.1 | Tomato | plasma membrane | 50.43 | 51.75 |
| KRG93981 | Soybean | plasma membrane | 33.33 | 50.98 |
| Bra026481.1-P | Field mustard | plasma membrane | 50.64 | 50.75 |
| AT5G23810.1 | Thale cress | plasma membrane | 50.64 | 50.75 |
| CDY16869 | Canola | plasma membrane | 50.43 | 50.21 |
| PGSC0003DMT400057311 | Potato | plasma membrane | 50.43 | 50.0 |
| Solyc07g066020.2.1 | Tomato | plasma membrane | 50.21 | 50.0 |
| TraesCS2A01G499800.1 | Wheat | plasma membrane | 51.07 | 49.28 |
| KRG98402 | Soybean | plasma membrane | 47.44 | 48.05 |
| KRH14166 | Soybean | plasma membrane | 45.09 | 46.99 |
| KRH46483 | Soybean | plasma membrane | 32.69 | 46.79 |
| TraesCS3A01G406800.1 | Wheat | plasma membrane | 46.58 | 46.68 |
| KRH73962 | Soybean | plasma membrane | 47.01 | 46.12 |
| TraesCS3A01G406900.1 | Wheat | plasma membrane | 46.58 | 45.42 |
| TraesCS3A01G407000.1 | Wheat | plasma membrane | 46.15 | 45.0 |
| TraesCS5A01G113300.1 | Wheat | cytosol, peroxisome, plasma membrane | 45.3 | 44.73 |
| TraesCS5A01G115100.1 | Wheat | plasma membrane | 45.3 | 44.26 |
| TraesCS4A01G215300.1 | Wheat | plasma membrane | 45.94 | 44.24 |
| TraesCS5A01G115800.2 | Wheat | plasma membrane | 43.16 | 43.63 |
| TraesCS1A01G264500.1 | Wheat | golgi, peroxisome, plasma membrane | 45.09 | 42.97 |
| TraesCS2A01G268200.1 | Wheat | plasma membrane | 44.23 | 42.86 |
| TraesCS7A01G194500.1 | Wheat | plasma membrane | 43.16 | 42.71 |
| TraesCS3A01G065600.1 | Wheat | plasma membrane | 41.67 | 42.39 |
| TraesCS7A01G356600.1 | Wheat | golgi, peroxisome, plasma membrane | 44.44 | 42.28 |
| TraesCS3A01G388100.1 | Wheat | plasma membrane | 42.31 | 42.04 |
| TraesCS3A01G388000.2 | Wheat | plasma membrane | 41.45 | 41.99 |
| TraesCS2A01G470200.1 | Wheat | plasma membrane | 22.86 | 41.96 |
| TraesCS7A01G188200.1 | Wheat | peroxisome | 42.73 | 41.32 |
| TraesCS2A01G348600.2 | Wheat | cytosol, plasma membrane, vacuole | 30.13 | 27.43 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G285200.1 | EnsemblPlantsGene:TraesCS6A01G285200 | InterPro:AA_transpt_TM | PANTHER:PTHR22950 | PANTHER:PTHR22950:SF228 | PFAM:PF01490 |
| SEG:seg | TMHMM:TMhelix | MapMan:24.2.3.4.1 | : | : | : |
Description
No Description!
Coordinates
chr6A:+:516583060..516606980
Molecular Weight (calculated)
50623.4 Da
IEP (calculated)
8.985
GRAVY (calculated)
0.375
Length
468 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGRGGDPQT GPLLEKLPES SRSSSEEHPV KRTGTVWTAS AHIITAVVGS GVLSLAWSVA QLGWVSGPTA IVFFAGVTVV QSSLLAECYI SRGDPERGSG
101: VRNKSYMDAV KFYLGEKRQM LSGFFLSISL FGSGVVYTLT TATSMRAIHE ANRYGREGRG APFSTAAAGG SDVYYMLLFG LAQAVLSQIP DFHNMAWLSV
201: FAAVMSFFYS FVGFGLGAAK VIENGVIMGG IGGIPLVSPM QKVWRVAQSL GDIAFAYPYT LVLLEIEDTL RSPPAESKTM KKASRASIAI TTFFYLGCGC
301: FGYAAFGDGT PGNLLTGFGE PYWLIDLANL SVVLHLLGGY QLYSQPAFAL VERRFGAEAW AVEVELPLLR WRRSVNVFRL CFRTAYVVAV TAMAVWYPYF
401: NQVVGLIGAF TFWPLDIHFP VEMYLAQNKV APWTTRWLAI QAFRATCLLV AAFASVGSAV GVFGPNKG
101: VRNKSYMDAV KFYLGEKRQM LSGFFLSISL FGSGVVYTLT TATSMRAIHE ANRYGREGRG APFSTAAAGG SDVYYMLLFG LAQAVLSQIP DFHNMAWLSV
201: FAAVMSFFYS FVGFGLGAAK VIENGVIMGG IGGIPLVSPM QKVWRVAQSL GDIAFAYPYT LVLLEIEDTL RSPPAESKTM KKASRASIAI TTFFYLGCGC
301: FGYAAFGDGT PGNLLTGFGE PYWLIDLANL SVVLHLLGGY QLYSQPAFAL VERRFGAEAW AVEVELPLLR WRRSVNVFRL CFRTAYVVAV TAMAVWYPYF
401: NQVVGLIGAF TFWPLDIHFP VEMYLAQNKV APWTTRWLAI QAFRATCLLV AAFASVGSAV GVFGPNKG
001: MVVQNVQDLD VLPKHSSDSF DDDGRPKRTG TVWTASAHII TAVIGSGVLS LAWAVAQIGW IGGPVAMLLF SFVTFYTSTL LCSCYRSGDS VTGKRNYTYM
101: DAIHSNLGGI KVKVCGVVQY VNLFGTAIGY TIASAISLVA IQRTSCQQMN GPNDPCHVNG NVYMIAFGIV QIIFSQIPDF DQLWWLSIVA AVMSFAYSAI
201: GLGLGVSKVV ENKEIKGSLT GVTVGTVTLS GTVTSSQKIW RTFQSLGNIA FAYSYSMILI EIQDTVKSPP AEVNTMRKAT FVSVAVTTVF YMLCGCVGYA
301: AFGDNAPGNL LAHGGFRNPY WLLDIANLAI VIHLVGAYQV YCQPLFAFVE KEASRRFPES EFVTKEIKIQ LFPGKPFNLN LFRLVWRTFF VMTTTLISML
401: MPFFNDVVGL LGAIGFWPLT VYFPVEMYIA QKNVPRWGTK WVCLQVLSVT CLFVSVAAAA GSVIGIVSDL KVYKPFQSEF
101: DAIHSNLGGI KVKVCGVVQY VNLFGTAIGY TIASAISLVA IQRTSCQQMN GPNDPCHVNG NVYMIAFGIV QIIFSQIPDF DQLWWLSIVA AVMSFAYSAI
201: GLGLGVSKVV ENKEIKGSLT GVTVGTVTLS GTVTSSQKIW RTFQSLGNIA FAYSYSMILI EIQDTVKSPP AEVNTMRKAT FVSVAVTTVF YMLCGCVGYA
301: AFGDNAPGNL LAHGGFRNPY WLLDIANLAI VIHLVGAYQV YCQPLFAFVE KEASRRFPES EFVTKEIKIQ LFPGKPFNLN LFRLVWRTFF VMTTTLISML
401: MPFFNDVVGL LGAIGFWPLT VYFPVEMYIA QKNVPRWGTK WVCLQVLSVT CLFVSVAAAA GSVIGIVSDL KVYKPFQSEF
Arabidopsis Description
AAP5Amino acid permease 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GUM3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.