Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G420700.1 | Wheat | plasma membrane | 96.97 | 95.73 |
| TraesCS3D01G381500.1 | Wheat | plasma membrane | 96.32 | 85.09 |
| Os01t0878700-02 | Rice | plasma membrane | 81.82 | 81.12 |
| KXG33808 | Sorghum | plasma membrane | 82.47 | 81.06 |
| Zm00001d012229_P001 | Maize | plasma membrane | 79.87 | 80.04 |
| VIT_18s0041g01270.t01 | Wine grape | plasma membrane | 56.71 | 57.58 |
| TraesCS2A01G470200.1 | Wheat | plasma membrane | 30.74 | 55.69 |
| TraesCS3A01G388100.1 | Wheat | plasma membrane | 55.84 | 54.78 |
| TraesCS7A01G194500.1 | Wheat | plasma membrane | 54.33 | 53.07 |
| TraesCS7A01G188200.1 | Wheat | peroxisome | 54.33 | 51.86 |
| TraesCS5A01G115800.2 | Wheat | plasma membrane | 51.52 | 51.4 |
| TraesCS3A01G406800.1 | Wheat | plasma membrane | 49.78 | 49.25 |
| TraesCS4A01G215300.1 | Wheat | plasma membrane | 51.52 | 48.97 |
| TraesCS2A01G268200.1 | Wheat | plasma membrane | 51.08 | 48.86 |
| TraesCS7A01G356600.1 | Wheat | golgi, peroxisome, plasma membrane | 51.52 | 48.37 |
| TraesCS3A01G406900.1 | Wheat | plasma membrane | 50.22 | 48.33 |
| TraesCS3A01G407000.1 | Wheat | plasma membrane | 49.78 | 47.92 |
| TraesCS5A01G113300.1 | Wheat | cytosol, peroxisome, plasma membrane | 48.7 | 47.47 |
| TraesCS5A01G115100.1 | Wheat | plasma membrane | 48.92 | 47.18 |
| TraesCS1A01G264500.1 | Wheat | golgi, peroxisome, plasma membrane | 49.13 | 46.23 |
| TraesCS2A01G331100.1 | Wheat | cytosol, peroxisome, plasma membrane | 45.24 | 44.95 |
| TraesCS3A01G065600.1 | Wheat | plasma membrane | 44.16 | 44.35 |
| TraesCS6A01G285300.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, peroxisome | 43.94 | 43.47 |
| TraesCS2A01G499800.1 | Wheat | plasma membrane | 43.94 | 41.86 |
| TraesCS6A01G285200.1 | Wheat | golgi, peroxisome, plasma membrane | 41.99 | 41.45 |
| GSMUA_Achr5P01300_001 | Banana | extracellular, plasma membrane, plastid | 70.13 | 29.78 |
| TraesCS2A01G348600.2 | Wheat | cytosol, plasma membrane, vacuole | 31.17 | 28.02 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G388000.2 | EnsemblPlantsGene:TraesCS3A01G388000 | InterPro:AA_transpt_TM | PANTHER:PTHR22950 | PANTHER:PTHR22950:SF274 | PFAM:PF01490 |
| SEG:seg | TMHMM:TMhelix | MapMan:24.2.3.4.1 | : | : | : |
Description
No Description!
Coordinates
chr3A:+:636856921..636861299
Molecular Weight (calculated)
49575.6 Da
IEP (calculated)
8.564
GRAVY (calculated)
0.560
Length
462 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVEKVTEVA PEVDDDGRVR TGTVWTATTH AITAVIGSGV LALPWSVAQM GWVLGPIALV GCAYITYFTA CLLSDCYRSP DPVHGKRNYT YMDAVRSCLG
101: PREVVVCGIT QYTILCGAVV GYTITAATGI MSVVRSNCRH YKGHGANCSQ EGTMYLVMFG VVEVVLSQLP SLEKVTFVSI VAAVMSFTYS FVALFLSAAK
201: FASNHKAYGT IFGSHIGGPG GVSAATRTWS FLQALGNIAF AYTYAMLLIE IQDTVKSPPS ENVTMKRASL YGIGVTTAFY VSLGCIGYAA FGNAAPNVLT
301: GFDEPFWLVD LANVAVVIHL VGAYQVYVQP VFACYESSLR ARYPDAAFFH REGRGRGALR FTMCKLVLRT AFVAATTVVS LMLPFFNAIL GLLGAAAFWP
401: LTVYFPVTMY ITQAKVPRGS GKWVALQALN VGALVVSLLA AVGSVADIVQ RLGHVTMFKT QL
101: PREVVVCGIT QYTILCGAVV GYTITAATGI MSVVRSNCRH YKGHGANCSQ EGTMYLVMFG VVEVVLSQLP SLEKVTFVSI VAAVMSFTYS FVALFLSAAK
201: FASNHKAYGT IFGSHIGGPG GVSAATRTWS FLQALGNIAF AYTYAMLLIE IQDTVKSPPS ENVTMKRASL YGIGVTTAFY VSLGCIGYAA FGNAAPNVLT
301: GFDEPFWLVD LANVAVVIHL VGAYQVYVQP VFACYESSLR ARYPDAAFFH REGRGRGALR FTMCKLVLRT AFVAATTVVS LMLPFFNAIL GLLGAAAFWP
401: LTVYFPVTMY ITQAKVPRGS GKWVALQALN VGALVVSLLA AVGSVADIVQ RLGHVTMFKT QL
001: MDAYNNPSAV ESGDAAVKSV DDDGREKRTG TFWTASAHII TAVIGSGVLS LAWAIAQLGW VAGTTVLVAF AIITYYTSTL LADCYRSPDS ITGTRNYNYM
101: GVVRSYLGGK KVQLCGVAQY VNLVGVTIGY TITASISLVA IGKSNCYHDK GHKAKCSVSN YPYMAAFGIV QIILSQLPNF HKLSFLSIIA AVMSFSYASI
201: GIGLAIATVA SGKIGKTELT GTVIGVDVTA SEKVWKLFQA IGDIAFSYAF TTILIEIQDT LRSSPPENKV MKRASLVGVS TTTVFYILCG CIGYAAFGNQ
301: APGDFLTDFG FYEPYWLIDF ANACIALHLI GAYQVYAQPF FQFVEENCNK KWPQSNFINK EYSSKVPLLG KCRVNLFRLV WRTCYVVLTT FVAMIFPFFN
401: AILGLLGAFA FWPLTVYFPV AMHIAQAKVK KYSRRWLALN LLVLVCLIVS ALAAVGSIIG LINSVKSYKP FKNLD
101: GVVRSYLGGK KVQLCGVAQY VNLVGVTIGY TITASISLVA IGKSNCYHDK GHKAKCSVSN YPYMAAFGIV QIILSQLPNF HKLSFLSIIA AVMSFSYASI
201: GIGLAIATVA SGKIGKTELT GTVIGVDVTA SEKVWKLFQA IGDIAFSYAF TTILIEIQDT LRSSPPENKV MKRASLVGVS TTTVFYILCG CIGYAAFGNQ
301: APGDFLTDFG FYEPYWLIDF ANACIALHLI GAYQVYAQPF FQFVEENCNK KWPQSNFINK EYSSKVPLLG KCRVNLFRLV WRTCYVVLTT FVAMIFPFFN
401: AILGLLGAFA FWPLTVYFPV AMHIAQAKVK KYSRRWLALN LLVLVCLIVS ALAAVGSIIG LINSVKSYKP FKNLD
Arabidopsis Description
AAP8amino acid permease 8 [Source:TAIR;Acc:AT1G10010]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.