Factsheet for Zm00001d012229_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

peroxisome 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, peroxisome, plasma membrane
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG33808	Sorghum	plasma membrane	94.79	92.98
Os01t0878700-02	Rice	plasma membrane	85.68	84.76
TraesCS3A01G388000.2	Wheat	plasma membrane	80.04	79.87
TraesCS3B01G420700.1	Wheat	plasma membrane	80.26	79.06
TraesCS3D01G381500.1	Wheat	plasma membrane	80.48	70.94
VIT_18s0041g01270.t01	Wine grape	plasma membrane	59.22	60.0
Zm00001d042636_P002	Maize	plasma membrane	57.48	56.62
Zm00001d012231_P002	Maize	plasma membrane	56.83	52.3
Zm00001d023593_P001	Maize	plasma membrane	53.8	51.99
Zm00001d041836_P001	Maize	plasma membrane	37.74	51.94
Zm00001d053143_P002	Maize	plasma membrane	52.71	51.48
Zm00001d023596_P001	Maize	cytosol, peroxisome, plasma membrane	53.8	51.45
Zm00001d023603_P001	Maize	plasma membrane	41.21	51.35
Zm00001d023592_P001	Maize	plasma membrane	53.36	51.25
Zm00001d010231_P001	Maize	plasma membrane	52.06	50.21
Zm00001d035243_P001	Maize	plasma membrane	52.06	49.59
Zm00001d042619_P002	Maize	plasma membrane	52.49	48.99
Zm00001d046263_P001	Maize	peroxisome	51.41	48.77
Zm00001d018751_P001	Maize	cytosol, peroxisome, plasma membrane	51.63	48.47
Zm00001d046235_P002	Maize	plasma membrane	49.24	48.2
Zm00001d003343_P001	Maize	plasma membrane	47.51	47.82
Zm00001d050211_P001	Maize	peroxisome	46.85	47.58
Zm00001d041842_P002	Maize	mitochondrion, peroxisome, plasma membrane, plastid, vacuole	52.28	46.98
Zm00001d004705_P001	Maize	plasma membrane	46.2	46.92
Zm00001d036984_P001	Maize	plasma membrane	47.72	46.91
Zm00001d017880_P006	Maize	plasma membrane	42.95	40.33
Zm00001d001984_P001	Maize	mitochondrion	47.51	39.46
GSMUA_Achr5P01300_001	Banana	extracellular, plasma membrane, plastid	72.45	30.7
Zm00001d025665_P002	Maize	plasma membrane	47.29	29.66

Protein Annotations

EMBL:BT066683	EnsemblPlants:Zm00001d012229_P001	EnsemblPlants:Zm00001d012229_T001	EnsemblPlantsGene:Zm00001d012229	EntrezGene:100383250	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF274	PFAM:PF01490
ProteinID:AQK99143.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI000195CB07	UniProt:C0PEG4	MapMan:24.2.3.4.1

Description

Amino acid permease 6

Coordinates

chr8:+:170466437..170472563

Molecular Weight (calculated)

49505.6 Da

IEP (calculated)

8.576

GRAVY (calculated)

0.604

Length

461 amino acids

Sequence
(BLAST)

001: MDVERKVVEA DDDGRVRTGT VWTATTHAIT AVIGSGVLAL PWSVAQMGWV LGPVALVGCA YITYFTAVLL SDCYRTPDPV HGKRNRTYMD VVRSCLGPRD
101: VVVCGLAQYA ILWGTMVGYT ITTATSIMAV ARTDCRHHRG HDAACASSGT VYMVAFGVVE VVLSQFPSLE KLTIISVVAA VMSCTYSFVG LFLSAAKLAS
201: NHGARGSLLG VKIAAGVSAS TKTWHSLQAL GNVAFAYTYS MLLIEIQDTV KAPPSENVTM KRASFYGISV TTIFYVSLGC IGYAAFGNAA PGNVLTGFDE
301: PFWLVDVANI AVVVHLVGAY QVYAQPIFAC YEKWLGSRWP DSAFFHHEYA VRLPGCAVRF TMCKLVLRTA FVAATTVVSL MLPFFNAVLG LLGAIAFWPL
401: TVYFPVTMYI AQAKVAPGSR KWVALQALNV GALLVSLLAA VGSVADMVQR LGHVTIFQTQ L

Best Arabidopsis Sequence Match ( AT1G10010.1 )
(BLAST)

001: MDAYNNPSAV ESGDAAVKSV DDDGREKRTG TFWTASAHII TAVIGSGVLS LAWAIAQLGW VAGTTVLVAF AIITYYTSTL LADCYRSPDS ITGTRNYNYM
101: GVVRSYLGGK KVQLCGVAQY VNLVGVTIGY TITASISLVA IGKSNCYHDK GHKAKCSVSN YPYMAAFGIV QIILSQLPNF HKLSFLSIIA AVMSFSYASI
201: GIGLAIATVA SGKIGKTELT GTVIGVDVTA SEKVWKLFQA IGDIAFSYAF TTILIEIQDT LRSSPPENKV MKRASLVGVS TTTVFYILCG CIGYAAFGNQ
301: APGDFLTDFG FYEPYWLIDF ANACIALHLI GAYQVYAQPF FQFVEENCNK KWPQSNFINK EYSSKVPLLG KCRVNLFRLV WRTCYVVLTT FVAMIFPFFN
401: AILGLLGAFA FWPLTVYFPV AMHIAQAKVK KYSRRWLALN LLVLVCLIVS ALAAVGSIIG LINSVKSYKP FKNLD

Arabidopsis Description

AAP8amino acid permease 8 [Source:TAIR;Acc:AT1G10010]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.