Factsheet for VIT_18s0041g01270.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 5
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	golgi
PProwler:	secretory
PTS1:	peroxisome
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0878700-02	Rice	plasma membrane	60.88	59.44
Zm00001d012229_P001	Maize	plasma membrane	60.0	59.22
KXG33808	Sorghum	plasma membrane	59.56	57.66
TraesCS3A01G388000.2	Wheat	plasma membrane	57.58	56.71
TraesCS3B01G420700.1	Wheat	plasma membrane	57.36	55.77
VIT_18s0041g01250.t01	Wine grape	plasma membrane	52.53	54.69
VIT_18s0041g01240.t01	Wine grape	plasma membrane	51.43	54.29
TraesCS3D01G381500.1	Wheat	plasma membrane	57.8	50.29
VIT_18s0001g02020.t01	Wine grape	cytosol, peroxisome, plasma membrane	49.45	46.78
VIT_19s0015g01300.t01	Wine grape	plasma membrane	47.03	46.72
VIT_07s0031g02440.t01	Wine grape	plasma membrane	35.16	46.51
VIT_18s0001g08270.t01	Wine grape	plasma membrane	48.35	45.55
VIT_10s0116g01380.t01	Wine grape	plasma membrane	44.4	44.59
VIT_19s0015g01290.t01	Wine grape	plasma membrane	44.84	43.22
VIT_03s0038g02290.t01	Wine grape	golgi, mitochondrion, peroxisome, plasma membrane	48.57	43.16
VIT_04s0008g00230.t01	Wine grape	plasma membrane	44.4	42.53
VIT_04s0008g00240.t01	Wine grape	plasma membrane	43.52	41.6
VIT_04s0008g00280.t01	Wine grape	plasma membrane	43.3	41.13
VIT_07s0031g02340.t01	Wine grape	peroxisome	49.23	39.79
VIT_04s0008g00250.t01	Wine grape	plasma membrane	42.86	33.05
GSMUA_Achr5P01300_001	Banana	extracellular, plasma membrane, plastid	62.86	26.29

Protein Annotations

EntrezGene:100253326	wikigene:100253326	MapMan:24.2.3.4.1	InterPro:AA_transpt_TM	ProteinID:CBI39290	ProteinID:CBI39290.3
UniProt:D7U976	EMBL:FN596744	GO:GO:0003333	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0015171	GO:GO:0016020
GO:GO:0016021	EntrezGene:LOC100253326	wikigene:LOC100253326	PFAM:PF01490	PANTHER:PTHR22950	PANTHER:PTHR22950:SF474
TMHMM:TMhelix	UniParc:UPI00015C93BE	ArrayExpress:VIT_18s0041g01270	EnsemblPlantsGene:VIT_18s0041g01270	EnsemblPlants:VIT_18s0041g01270.t01	RefSeq:XP_002280128
RefSeq:XP_002280128.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr18:-:25899708..25904349

Molecular Weight (calculated)

50559.4 Da

IEP (calculated)

9.324

GRAVY (calculated)

0.540

Length

455 amino acids

Sequence
(BLAST)

001: MVCFTGTVWT AAAHAVAAVI GSGVLAVPWS VAQMGWLFGP LALFTFAVVT YYTARMLADC YRTPDPVHGS RNYTYSDAVR ACLGTRYVYI CGIIQYILLW
101: GTMVGYVITA ATSMASIKRT NCFHQKEPNA DCKAKVSGNL FMLIYGGVEI LLSQFPSLEK ITILSVVAAT MSFGYSFIAL YLCIEKFASH HDLKASNLTG
201: VDVGKNDISQ STKVWQSFQA LGNIAFAYTF ANILIEIQDT LKSPPAENKT MKRATLYGIG VTTAFYLSIG VMGYMAFGND APGNVLTGFH EPFWLVDLAN
301: FAVIIHLSGS FQVFAQPIFT VYEKWIASRW PPTSFFLHVY TIKLPFPRPC LFQFTLCKLL LRTLFIILTT TIAMMLPFFN AVLGFLGAIS FWPLTVYFPV
401: TMHLSHSKVK RRSREWMMLQ SLSMVSLLVS AIATVGSIID IVHRLEHTKL FSAKL

Best Arabidopsis Sequence Match ( AT1G10010.1 )
(BLAST)

001: MDAYNNPSAV ESGDAAVKSV DDDGREKRTG TFWTASAHII TAVIGSGVLS LAWAIAQLGW VAGTTVLVAF AIITYYTSTL LADCYRSPDS ITGTRNYNYM
101: GVVRSYLGGK KVQLCGVAQY VNLVGVTIGY TITASISLVA IGKSNCYHDK GHKAKCSVSN YPYMAAFGIV QIILSQLPNF HKLSFLSIIA AVMSFSYASI
201: GIGLAIATVA SGKIGKTELT GTVIGVDVTA SEKVWKLFQA IGDIAFSYAF TTILIEIQDT LRSSPPENKV MKRASLVGVS TTTVFYILCG CIGYAAFGNQ
301: APGDFLTDFG FYEPYWLIDF ANACIALHLI GAYQVYAQPF FQFVEENCNK KWPQSNFINK EYSSKVPLLG KCRVNLFRLV WRTCYVVLTT FVAMIFPFFN
401: AILGLLGAFA FWPLTVYFPV AMHIAQAKVK KYSRRWLALN LLVLVCLIVS ALAAVGSIIG LINSVKSYKP FKNLD

Arabidopsis Description

AAP8amino acid permease 8 [Source:TAIR;Acc:AT1G10010]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.