Factsheet for VIT_04s0008g00250.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
plasma membrane 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0008g00280.t01	Wine grape	plasma membrane	56.95	70.15
VIT_04s0008g00230.t01	Wine grape	plasma membrane	55.93	69.47
VIT_04s0008g00240.t01	Wine grape	plasma membrane	54.07	67.02
TraesCS2A01G470200.1	Wheat	plasma membrane	23.56	54.51
Os06t0556000-01	Rice	plasma membrane	43.9	53.18
VIT_07s0031g02440.t01	Wine grape	plasma membrane	30.85	52.91
TraesCS2D01G470100.1	Wheat	plasma membrane	37.29	52.76
GSMUA_Achr10P...	Banana	plasma membrane	40.68	52.75
KRH04869	Soybean	peroxisome, plasma membrane, vacuole	41.86	52.67
TraesCS7A01G194500.1	Wheat	plasma membrane	42.2	52.64
Os06t0228600-01	Rice	peroxisome	43.05	52.48
Zm00001d046263_P001	Maize	peroxisome	43.05	52.26
TraesCS7B01G100100.1	Wheat	peroxisome	41.86	52.22
TraesCS7D01G196100.1	Wheat	plasma membrane	41.86	52.22
EER88513	Sorghum	peroxisome	43.39	52.14
VIT_18s0001g02020.t01	Wine grape	cytosol, peroxisome, plasma membrane	42.37	51.98
TraesCS7A01G188200.1	Wheat	peroxisome	42.37	51.65
KRH62110	Soybean	plasma membrane	41.19	51.59
KRH52799	Soybean	plasma membrane	41.19	51.59
KRH16264	Soybean	plasma membrane	41.19	51.48
TraesCS7B01G093200.1	Wheat	peroxisome	42.2	51.45
KRH52796	Soybean	plasma membrane	40.85	51.28
TraesCS7D01G189000.1	Wheat	plasma membrane	42.2	51.02
HORVU7Hr1G088560.2	Barley	golgi, peroxisome, plasma membrane	42.37	51.02
HORVU7Hr1G038330.1	Barley	plasma membrane	42.54	51.02
TraesCS2B01G493000.1	Wheat	plasma membrane	41.53	50.94
TraesCS7D01G366200.1	Wheat	peroxisome	42.2	50.82
TraesCS7A01G356600.1	Wheat	golgi, peroxisome, plasma membrane	42.37	50.81
TraesCS7B01G271200.1	Wheat	peroxisome	42.03	50.61
TraesCS7D01G366000.1	Wheat	plasma membrane	38.64	50.11
Zm00001d046235_P002	Maize	plasma membrane	40.0	50.11
KRH16269	Soybean	plasma membrane	38.98	50.0
HORVU7Hr1G088510.2	Barley	plasma membrane	38.81	49.89
OQU76565	Sorghum	plasma membrane	39.66	49.37
HORVU7Hr1G039670.2	Barley	mitochondrion, peroxisome	43.22	49.32
VIT_03s0038g02290.t01	Wine grape	golgi, mitochondrion, peroxisome, plasma membrane	42.37	48.83
VIT_18s0001g08270.t01	Wine grape	plasma membrane	39.83	48.65
KXG20176	Sorghum	plasma membrane	37.46	48.36
VIT_19s0015g01300.t01	Wine grape	plasma membrane	37.29	48.03
VIT_10s0116g01380.t01	Wine grape	plasma membrane	36.61	47.68
Zm00001d036984_P001	Maize	plasma membrane	37.46	47.12
VIT_07s0031g02340.t01	Wine grape	peroxisome	42.37	44.41
VIT_19s0015g01290.t01	Wine grape	plasma membrane	35.42	44.28
TraesCS2D01G470800.1	Wheat	plasma membrane	27.97	43.88
VIT_18s0041g01270.t01	Wine grape	plasma membrane	33.05	42.86
VIT_18s0041g01240.t01	Wine grape	plasma membrane	30.85	42.23
VIT_18s0041g01250.t01	Wine grape	plasma membrane	31.19	42.11

Protein Annotations

EntrezGene:100259319	wikigene:100259319	MapMan:24.2.3.4.1	InterPro:AA_transpt_TM	ProteinID:CBI20575	ProteinID:CBI20575.3
UniProt:D7STH6	EMBL:FN595231	GO:GO:0003333	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0015171	GO:GO:0016020
GO:GO:0016021	EntrezGene:LOC100259319	wikigene:LOC100259319	PFAM:PF01490	PANTHER:PTHR22950	PANTHER:PTHR22950:SF344
TMHMM:TMhelix	UniParc:UPI0001BE1A4A	ArrayExpress:VIT_04s0008g00250	EnsemblPlantsGene:VIT_04s0008g00250	EnsemblPlants:VIT_04s0008g00250.t01	RefSeq:XP_002277865
RefSeq:XP_002277865.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4:+:176405..181717

Molecular Weight (calculated)

64897.6 Da

IEP (calculated)

8.276

GRAVY (calculated)

0.397

Length

590 amino acids

Sequence
(BLAST)

001: MVNRVVGDED IIQNSECDSG LDPQKVADGD FDEDGRSKRT GTVWTVTAHI VTVVVGFGVL SLPWGVAQLG WLAGVATLLV FGIITFYTSS LLAECYKSPV
101: TGKRNYTYMQ AVKTTLGGKM YMVCGLVQYA IVTGSIIGFT LTASISMEAI LKSDCYHKSG HDASCQFSHR PYMIGMGIFE IFLSQVPKID HVWWLSIMAT
201: LTSLGYSFIG VGLALATIIS GHGKRTSVTG IEIGPGITPA QKIWRMFRAL GNIALAYSYS LVLIEVQDTI KSSKSEIKVM KKANMAGVLI TTTLYLSCAC
301: FGYAAFGNYA HGNMLTGFGF YEPFWLIDLA NIFIVVHLVG AYQVLAQPVF SAVESQARRR WPMSKFVTAE YPVGIGNKTL NFSINFLRLT WRTVFVGLVT
401: SVAMAFPFFN EVLALLGAIS YWPLTVYFPV NMYIAQKKIS PRTIRWFGLQ LLNFVCLLVA LASACGSVEG FGEALLLIVV PLPELVHKTS EILTQPSALF
501: NLISISVFNF TVSKLIKLSF CWCSLVGEKR RKGTMVRMVN EGDDRDIEKE GCEDGLGGNE VADGNFDEDG RLRRAGIMKL VHGAFWLLMH

Best Arabidopsis Sequence Match ( AT1G10010.1 )
(BLAST)

001: MDAYNNPSAV ESGDAAVKSV DDDGREKRTG TFWTASAHII TAVIGSGVLS LAWAIAQLGW VAGTTVLVAF AIITYYTSTL LADCYRSPDS ITGTRNYNYM
101: GVVRSYLGGK KVQLCGVAQY VNLVGVTIGY TITASISLVA IGKSNCYHDK GHKAKCSVSN YPYMAAFGIV QIILSQLPNF HKLSFLSIIA AVMSFSYASI
201: GIGLAIATVA SGKIGKTELT GTVIGVDVTA SEKVWKLFQA IGDIAFSYAF TTILIEIQDT LRSSPPENKV MKRASLVGVS TTTVFYILCG CIGYAAFGNQ
301: APGDFLTDFG FYEPYWLIDF ANACIALHLI GAYQVYAQPF FQFVEENCNK KWPQSNFINK EYSSKVPLLG KCRVNLFRLV WRTCYVVLTT FVAMIFPFFN
401: AILGLLGAFA FWPLTVYFPV AMHIAQAKVK KYSRRWLALN LLVLVCLIVS ALAAVGSIIG LINSVKSYKP FKNLD

Arabidopsis Description

AAP8amino acid permease 8 [Source:TAIR;Acc:AT1G10010]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.