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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • peroxisome 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, secretory
BaCelLo:nucleus
MultiLoc:peroxisome
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d001984_P001 Maize mitochondrion 92.86 79.64
TraesCS2B01G527800.1 Wheat plasma membrane 74.37 73.14
TraesCS2D01G500000.1 Wheat plasma membrane 73.32 72.26
TraesCS2A01G499800.1 Wheat plasma membrane 72.69 71.34
Os04t0659800-00 Rice plasma membrane 79.41 69.87
HORVU2Hr1G111140.3 Barley golgi 69.96 67.14
KXG26523 Sorghum plasma membrane 63.87 66.09
KRH14179 Soybean plasma membrane 51.26 64.55
KRH73957 Soybean plasma membrane 61.76 63.77
VIT_19s0015g01300.t01 Wine grape plasma membrane 61.34 63.76
KRG98404 Soybean plasma membrane 60.5 62.47
KRG98405 Soybean plasma membrane 60.29 62.26
KRH46488 Soybean plasma membrane 59.87 61.82
PGSC0003DMT400057313 Potato plasma membrane 57.56 60.09
Solyc07g066010.2.1 Tomato plasma membrane 57.35 59.87
VIT_19s0015g01290.t01 Wine grape plasma membrane 58.19 58.69
KRG93981 Soybean plasma membrane 37.6 58.5
EES07345 Sorghum golgi, peroxisome, plasma membrane 53.78 54.47
Solyc07g066020.2.1 Tomato plasma membrane 52.94 53.62
PGSC0003DMT400057311 Potato plasma membrane 53.15 53.6
Bra026481.1-P Field mustard plasma membrane 52.31 53.32
AT5G23810.1 Thale cress plasma membrane 52.31 53.32
CDX87155 Canola plasma membrane 39.29 53.12
CDY16869 Canola plasma membrane 52.1 52.77
KRH46483 Soybean plasma membrane 35.92 52.29
EES16761 Sorghum plasma membrane 51.68 51.46
EES16763 Sorghum plasma membrane 51.47 50.94
KRG98402 Soybean plasma membrane 49.37 50.87
EES08159 Sorghum cytosol, peroxisome, plasma membrane 51.47 50.41
EES15765 Sorghum plasma membrane 50.63 50.31
EES16764 Sorghum plasma membrane 50.84 50.21
EES08162 Sorghum plasma membrane 50.21 49.69
KRH14166 Soybean plasma membrane 46.43 49.22
KRH73962 Soybean plasma membrane 48.95 48.85
EES03989 Sorghum plasma membrane 50.21 48.68
EER88513 Sorghum peroxisome 49.58 48.07
OQU78029 Sorghum cytosol, peroxisome, plasma membrane 48.95 48.04
KXG33808 Sorghum plasma membrane 47.06 47.66
KXG23123 Sorghum mitochondrion, plastid 50.21 47.61
KXG20176 Sorghum plasma membrane 45.59 47.48
OQU76565 Sorghum plasma membrane 46.22 46.41
KXG23106 Sorghum cytosol, peroxisome, plasma membrane 46.43 45.85
EER97947 Sorghum golgi, peroxisome, plasma membrane 46.22 45.83
OQU87977 Sorghum plasma membrane 44.12 45.06
EES13588 Sorghum cytosol, peroxisome, plasma membrane 47.06 44.98
EES15803 Sorghum plasma membrane 42.44 42.0
Protein Annotations
MapMan:24.2.3.4.1EntrezGene:8070265InterPro:AA_transpt_TMUniProt:C5Y9L0EnsemblPlants:EES11591ProteinID:EES11591
ProteinID:EES11591.1GO:GO:0003333GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0015171GO:GO:0016020GO:GO:0016021
PFAM:PF01490PANTHER:PTHR22950PANTHER:PTHR22950:SF320EnsemblPlantsGene:SORBI_3006G250200unigene:Sbi.19739TMHMM:TMhelix
UniParc:UPI0001A87215RefSeq:XP_002447263.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr6:+:58908552..58911443
Molecular Weight (calculated)
51699.7 Da
IEP (calculated)
8.509
GRAVY (calculated)
0.423
Length
476 amino acids
Sequence
(BLAST)
001: MAHHHGSHSL EVAAAAGGPG PELDDDGHAA RTGNIWTCFA HIITAIIGAG VLALSWSVAQ LGWVGGPIAM LCFAFVTYLS AFLLSHCYRS PVHSDDGSQK
101: RQRNYTYMDA VRTHLGEKRT WLCGLLQYLN LYGTAIAYTI TTATCLRAIV RANCYHSRGH DAPCGAGGDH LYMLLFGAAQ VVLSFIPNFH NMAWLSVVAA
201: VMSFTYSTIG LGLGLAKTIE NGAIKGSVTG VPMSTPAQKV WRVAQAIGDI AFAYPYTIVL LEIQDTLKSP PPESETMQKG NVIAVLATTF FYLAVSCFGY
301: AAFGNAAPGN LLTGFGFYEP YWLIDFANAC IVLHLLGGYQ MFSQQIFTFA DRSLAARFPN SAFVNKSYAV KVPGVPASWS YRLNLQRVCF RTAYVASTTG
401: LALLFPYFNE VLGVLGAVVF WPLAIYLPVE MYCVQRGVRP WTRTWVALQA FSAVCFVVGT FAFVGSVEGV IRKRLG
Best Arabidopsis Sequence Match ( AT5G23810.1 )
(BLAST)
001: MDIKEDDESR VITPTELQLH DSVTARTGTL WTAVAHIITG VIGAGVLSLA WATAELGWIA GPAALIAFAG VTLLSAFLLS DCYRFPDPNN GPLRLNSYSQ
101: AVKLYLGKKN EIVCGVVVYI SLFGCGIAYT IVIATCSRAI MKSNCYHRNG HNATCSYGDN NNYFMVLFGL TQIFMSQIPN FHNMVWLSLV AAIMSFTYSF
201: IGIGLALGKI IENRKIEGSI RGIPAENRGE KVWIVFQALG NIAFSYPFSI ILLEIQDTLR SPPAEKQTMK KASTVAVFIQ TFFFFCCGCF GYAAFGDSTP
301: GNLLTGFGFY EPFWLVDFAN ACIVLHLVGG YQVYSQPIFA AAERSLTKKY PENKFIARFY GFKLPLLRGE TVRLNPMRMC LRTMYVLITT GVAVMFPYFN
401: EVLGVVGALA FWPLAVYFPV EMCILQKKIR SWTRPWLLLR GFSFVCLLVC LLSLVGSIYG LVGAKFG
Arabidopsis Description
AAP7Probable amino acid permease 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FF99]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.