Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020903.1-P | Field mustard | extracellular | 100.0 | 61.07 |
| CDX76436 | Canola | extracellular | 100.0 | 61.07 |
| CDX98689 | Canola | extracellular | 88.75 | 53.38 |
| AT4G21620.1 | Thale cress | extracellular | 86.25 | 52.67 |
| CDX94042 | Canola | extracellular | 86.25 | 51.88 |
| Solyc10g009190.1.1 | Tomato | nucleus | 43.75 | 28.0 |
| PGSC0003DMT400028050 | Potato | extracellular | 42.5 | 27.2 |
| CDY40955 | Canola | extracellular | 52.5 | 27.1 |
| KRH10772 | Soybean | extracellular | 48.75 | 26.71 |
| CDY12893 | Canola | endoplasmic reticulum, extracellular, vacuole | 51.25 | 26.45 |
| GSMUA_Achr6P30210_001 | Banana | cytosol, extracellular, plastid | 26.25 | 26.25 |
| Os03t0676300-01 | Rice | extracellular | 52.5 | 25.61 |
| KRH21551 | Soybean | cytosol, extracellular, mitochondrion, vacuole | 53.75 | 25.6 |
| Solyc02g078850.1.1 | Tomato | extracellular, nucleus | 46.25 | 25.52 |
| TraesCS4D01G020900.1 | Wheat | extracellular | 50.0 | 25.0 |
| GSMUA_Achr4P32330_001 | Banana | extracellular | 43.75 | 24.14 |
| VIT_00s0301g00040.t01 | Wine grape | extracellular | 46.25 | 23.87 |
| GSMUA_Achr9P26340_001 | Banana | extracellular | 41.25 | 23.74 |
| PGSC0003DMT400057614 | Potato | extracellular | 45.0 | 23.38 |
| TraesCS4A01G290900.1 | Wheat | extracellular | 43.75 | 21.47 |
| EER93676 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 48.75 | 21.43 |
| GSMUA_Achr7P00710_001 | Banana | extracellular | 36.25 | 20.42 |
| VIT_13s0073g00040.t01 | Wine grape | cytosol, extracellular, plastid | 20.0 | 19.75 |
| Zm00001d013551_P001 | Maize | endoplasmic reticulum, plasma membrane | 40.0 | 19.39 |
| GSMUA_Achr5P01900_001 | Banana | extracellular | 32.5 | 18.84 |
| KXG24122 | Sorghum | plastid | 45.0 | 17.91 |
| Zm00001d031191_P001 | Maize | extracellular | 31.25 | 16.03 |
Protein Annotations
| EnsemblPlants:CDY31419 | EnsemblPlantsGene:GSBRNA2T00047646001 | ProteinID:CDY31419 | ProteinID:CDY31419.1 | SEG:seg | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI0004EE1C9C | UniProt:A0A078H1V3 | MapMan:35.2 | : | : |
Description
BnaC03g64050DBnaC03g64050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H1V3]
Coordinates
chrLK032272:+:14029..14696
Molecular Weight (calculated)
7893.6 Da
IEP (calculated)
8.652
GRAVY (calculated)
0.231
Length
80 amino acids
Sequence
(BLAST)
(BLAST)
1: MFTKPIILAS LLLIVFVSAT HSARHKSGND GSGFGGVPGF DGIPGFGNGF PGTGVGGGYG GGYGGGGCTM DCKKKCIAYC
001: MFTKSILLAS LLIIILVSAT ESARQKSGND GLGFGGVPGS GFIPGFGNGF PGTGVGGGYG GGFGGPSGGF GKGGVVRPTV TCKEKGPCNG KKLRCPAKCF
101: KSFSRSGKGY GGGGGGGGCT MDCKKKCIAY C
101: KSFSRSGKGY GGGGGGGGCT MDCKKKCIAY C
Arabidopsis Description
AT4g21620/F17L22_80 [Source:UniProtKB/TrEMBL;Acc:Q9SVT5]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.