CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra027092.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	100.0	100.0
CDY40955	Canola	extracellular	94.19	94.19
GSMUA_Achr6P30210_001	Banana	cytosol, extracellular, plastid	35.48	68.75
VIT_13s0073g00040.t01	Wine grape	cytosol, extracellular, plastid	33.55	64.2
CDX76436	Canola	extracellular	52.9	62.6
AT1G61255.1	Thale cress	extracellular	57.42	62.24
CDX98689	Canola	extracellular	52.26	60.9
CDX94042	Canola	extracellular	51.61	60.15
VIT_00s0301g00040.t01	Wine grape	extracellular	56.77	56.77
GSMUA_Achr4P32330_001	Banana	extracellular	52.26	55.86
KRH10772	Soybean	extracellular	52.26	55.48
Solyc10g009190.1.1	Tomato	nucleus	43.23	53.6
GSMUA_Achr5P01900_001	Banana	extracellular	46.45	52.17
GSMUA_Achr7P00710_001	Banana	extracellular	47.74	52.11
PGSC0003DMT400028050	Potato	extracellular	41.94	52.0
GSMUA_Achr9P26340_001	Banana	extracellular	46.45	51.8
CDY31419	Canola	extracellular	26.45	51.25
KRH21551	Soybean	cytosol, extracellular, mitochondrion, vacuole	55.48	51.19
Solyc02g078850.1.1	Tomato	extracellular, nucleus	42.58	45.52
TraesCS4D01G020900.1	Wheat	extracellular	46.45	45.0
PGSC0003DMT400057614	Potato	extracellular	43.87	44.16
Os03t0676300-01	Rice	extracellular	46.45	43.9
TraesCS4A01G290900.1	Wheat	extracellular	44.52	42.33
Zm00001d013551_P001	Maize	endoplasmic reticulum, plasma membrane	44.52	41.82
EER93676	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	45.16	38.46
KXG24122	Sorghum	plastid	45.16	34.83
Zm00001d031191_P001	Maize	extracellular	34.19	33.97

Protein Annotations

EnsemblPlants:CDY12893	EnsemblPlantsGene:GSBRNA2T00070558001	PANTHER:PTHR34789	PANTHER:PTHR34789:SF1	ProteinID:CDY12893	ProteinID:CDY12893.1
SEG:seg	SignalP:SignalP-noTM	UniParc:UPI00025425EE	UniProt:A0A078FL37	MapMan:35.2	:

Description

BnaA09g13810DBnaA09g13810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FL37]

Coordinates

chrLK032028:-:216158..216625

Molecular Weight (calculated)

15886.2 Da

IEP (calculated)

10.120

GRAVY (calculated)

-0.425

Length

155 amino acids

Sequence
(BLAST)

001: MTTKLIVLFT LLLLTLTLSH SRPTGPESVS DQLKKSSKGN NNKNDKGYGS GGYFGPGTGS VPGTGFGLPG FTGKDWGNIG GGYGGGYGGP TGGYNKGGVV
101: RPTVVCKEKG HCYMKKLRCP AKCFKSFSRS GKGYGGGGGG GGCTIDCKKK CMAYC

Best Arabidopsis Sequence Match ( AT1G61255.1 )
(BLAST)

001: MATKLNLLFT ILLLTLTLSH SRPARPESSS STGSYSDQLK KHSKDNYNKG YGSGGYPGLT TEPATGFILP GSGPGGSYSE LSGGYSKGRG VRLTVMCEEK
101: GHCYMKKLTC PAKCFKSLSR KGKGYGGGGG GCTIDCKKCV AYC

Arabidopsis Description

At1g61255 [Source:UniProtKB/TrEMBL;Acc:O22721]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.