Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY12893 | Canola | endoplasmic reticulum, extracellular, vacuole | 94.19 | 94.19 |
| GSMUA_Achr6P30210_001 | Banana | cytosol, extracellular, plastid | 35.48 | 68.75 |
| VIT_13s0073g00040.t01 | Wine grape | cytosol, extracellular, plastid | 32.9 | 62.96 |
| CDX76436 | Canola | extracellular | 52.9 | 62.6 |
| AT1G61255.1 | Thale cress | extracellular | 56.77 | 61.54 |
| CDX98689 | Canola | extracellular | 52.26 | 60.9 |
| CDX94042 | Canola | extracellular | 51.61 | 60.15 |
| GSMUA_Achr4P32330_001 | Banana | extracellular | 53.55 | 57.24 |
| VIT_00s0301g00040.t01 | Wine grape | extracellular | 56.77 | 56.77 |
| KRH10772 | Soybean | extracellular | 51.61 | 54.79 |
| Solyc10g009190.1.1 | Tomato | nucleus | 43.23 | 53.6 |
| GSMUA_Achr7P00710_001 | Banana | extracellular | 48.39 | 52.82 |
| CDY31419 | Canola | extracellular | 27.1 | 52.5 |
| GSMUA_Achr5P01900_001 | Banana | extracellular | 46.45 | 52.17 |
| GSMUA_Achr9P26340_001 | Banana | extracellular | 46.45 | 51.8 |
| KRH21551 | Soybean | cytosol, extracellular, mitochondrion, vacuole | 56.13 | 51.79 |
| PGSC0003DMT400028050 | Potato | extracellular | 41.29 | 51.2 |
| TraesCS4D01G020900.1 | Wheat | extracellular | 47.1 | 45.62 |
| Os03t0676300-01 | Rice | extracellular | 47.1 | 44.51 |
| Solyc02g078850.1.1 | Tomato | extracellular, nucleus | 41.29 | 44.14 |
| TraesCS4A01G290900.1 | Wheat | extracellular | 45.81 | 43.56 |
| PGSC0003DMT400057614 | Potato | extracellular | 42.58 | 42.86 |
| Zm00001d013551_P001 | Maize | endoplasmic reticulum, plasma membrane | 45.16 | 42.42 |
| EER93676 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 45.81 | 39.01 |
| KXG24122 | Sorghum | plastid | 45.81 | 35.32 |
| Zm00001d031191_P001 | Maize | extracellular | 34.84 | 34.62 |
Protein Annotations
| EnsemblPlants:CDY40955 | EnsemblPlantsGene:GSBRNA2T00072197001 | PANTHER:PTHR34789 | PANTHER:PTHR34789:SF1 | ProteinID:CDY40955 | ProteinID:CDY40955.1 |
| SEG:seg | SignalP:SignalP-noTM | UniParc:UPI0004EF4A5D | UniProt:A0A078HQS8 | MapMan:35.2 | : |
Description
BnaCnng09980DBnaCnng09980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HQS8]
Coordinates
chrLK032486:+:100498..101108
Molecular Weight (calculated)
15911.3 Da
IEP (calculated)
10.291
GRAVY (calculated)
-0.397
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTKLIVLLT LLLLALTLSH SRPTRPKSVS DQLNKHSKGN NNKNDKGYGS GGYFGPGTGS VPGTGFGLPG FTGKDWGNIG GGYGGGYGGP TGGYSKGGVV
101: RPTVVCKEKG HCYMKKLRCP AKCFKSFSRS GKGYAGGGGG GGCTIDCKKK CVAYC
101: RPTVVCKEKG HCYMKKLRCP AKCFKSFSRS GKGYAGGGGG GGCTIDCKKK CVAYC
001: MATKLNLLFT ILLLTLTLSH SRPARPESSS STGSYSDQLK KHSKDNYNKG YGSGGYPGLT TEPATGFILP GSGPGGSYSE LSGGYSKGRG VRLTVMCEEK
101: GHCYMKKLTC PAKCFKSLSR KGKGYGGGGG GCTIDCKKCV AYC
101: GHCYMKKLTC PAKCFKSLSR KGKGYGGGGG GCTIDCKKCV AYC
Arabidopsis Description
At1g61255 [Source:UniProtKB/TrEMBL;Acc:O22721]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.