Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 3
- endoplasmic reticulum 3
- mitochondrion 2
- plasma membrane 2
- vacuole 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027092.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 62.24 | 57.42 |
| CDY12893 | Canola | endoplasmic reticulum, extracellular, vacuole | 62.24 | 57.42 |
| CDY40955 | Canola | extracellular | 61.54 | 56.77 |
| GSMUA_Achr6P30210_001 | Banana | cytosol, extracellular, plastid | 31.47 | 56.25 |
| VIT_13s0073g00040.t01 | Wine grape | cytosol, extracellular, plastid | 30.07 | 53.09 |
| AT4G21620.1 | Thale cress | extracellular | 46.15 | 50.38 |
| VIT_00s0301g00040.t01 | Wine grape | extracellular | 51.75 | 47.74 |
| GSMUA_Achr4P32330_001 | Banana | extracellular | 46.15 | 45.52 |
| GSMUA_Achr7P00710_001 | Banana | extracellular | 42.66 | 42.96 |
| TraesCS4D01G020900.1 | Wheat | extracellular | 46.85 | 41.88 |
| GSMUA_Achr9P26340_001 | Banana | extracellular | 40.56 | 41.73 |
| GSMUA_Achr5P01900_001 | Banana | extracellular | 39.86 | 41.3 |
| Solyc10g009190.1.1 | Tomato | nucleus | 35.66 | 40.8 |
| KRH21551 | Soybean | cytosol, extracellular, mitochondrion, vacuole | 47.55 | 40.48 |
| PGSC0003DMT400028050 | Potato | extracellular | 34.27 | 39.2 |
| Os03t0676300-01 | Rice | extracellular | 44.76 | 39.02 |
| KRH10772 | Soybean | extracellular | 39.16 | 38.36 |
| Solyc02g078850.1.1 | Tomato | extracellular, nucleus | 38.46 | 37.93 |
| Zm00001d013551_P001 | Maize | endoplasmic reticulum, plasma membrane | 43.36 | 37.58 |
| TraesCS4A01G290900.1 | Wheat | extracellular | 41.96 | 36.81 |
| PGSC0003DMT400057614 | Potato | extracellular | 38.46 | 35.71 |
| EER93676 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 43.36 | 34.07 |
| Zm00001d031191_P001 | Maize | extracellular | 32.87 | 30.13 |
| KXG24122 | Sorghum | plastid | 39.16 | 27.86 |
Protein Annotations
| MapMan:35.2 | EntrezGene:842419 | UniProt:A0A178W9F5 | ProteinID:AAB71470.1 | ProteinID:AEE33813.1 | ArrayExpress:AT1G61255 |
| EnsemblPlantsGene:AT1G61255 | RefSeq:AT1G61255 | TAIR:AT1G61255 | RefSeq:AT1G61255-TAIR-G | EnsemblPlants:AT1G61255.1 | TAIR:AT1G61255.1 |
| EMBL:BT029313 | GO:GO:0008150 | RefSeq:NP_683457.1 | UniProt:O22721 | ProteinID:OAP13692.1 | PO:PO:0000293 |
| PANTHER:PTHR34789 | PANTHER:PTHR34789:SF1 | SignalP:SignalP-noTM | UniParc:UPI000009EBE2 | SEG:seg | : |
Description
At1g61255 [Source:UniProtKB/TrEMBL;Acc:O22721]
Coordinates
chr1:-:22589098..22589789
Molecular Weight (calculated)
15055.1 Da
IEP (calculated)
9.684
GRAVY (calculated)
-0.421
Length
143 amino acids
Sequence
(BLAST)
(BLAST)
001: MATKLNLLFT ILLLTLTLSH SRPARPESSS STGSYSDQLK KHSKDNYNKG YGSGGYPGLT TEPATGFILP GSGPGGSYSE LSGGYSKGRG VRLTVMCEEK
101: GHCYMKKLTC PAKCFKSLSR KGKGYGGGGG GCTIDCKKCV AYC
101: GHCYMKKLTC PAKCFKSLSR KGKGYGGGGG GCTIDCKKCV AYC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.