Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY12893 | Canola | endoplasmic reticulum, extracellular, vacuole | 100.0 | 100.0 |
| GSMUA_Achr6P30210_001 | Banana | cytosol, extracellular, plastid | 35.48 | 68.75 |
| VIT_13s0073g00040.t01 | Wine grape | cytosol, extracellular, plastid | 33.55 | 64.2 |
| Bra020903.1-P | Field mustard | extracellular | 52.9 | 62.6 |
| AT1G61255.1 | Thale cress | extracellular | 57.42 | 62.24 |
| Bra038769.1-P | Field mustard | extracellular | 52.26 | 60.9 |
| VIT_00s0301g00040.t01 | Wine grape | extracellular | 56.77 | 56.77 |
| GSMUA_Achr4P32330_001 | Banana | extracellular | 52.26 | 55.86 |
| KRH10772 | Soybean | extracellular | 52.26 | 55.48 |
| Solyc10g009190.1.1 | Tomato | nucleus | 43.23 | 53.6 |
| GSMUA_Achr5P01900_001 | Banana | extracellular | 46.45 | 52.17 |
| GSMUA_Achr7P00710_001 | Banana | extracellular | 47.74 | 52.11 |
| PGSC0003DMT400028050 | Potato | extracellular | 41.94 | 52.0 |
| GSMUA_Achr9P26340_001 | Banana | extracellular | 46.45 | 51.8 |
| KRH21551 | Soybean | cytosol, extracellular, mitochondrion, vacuole | 55.48 | 51.19 |
| Solyc02g078850.1.1 | Tomato | extracellular, nucleus | 42.58 | 45.52 |
| TraesCS4D01G020900.1 | Wheat | extracellular | 46.45 | 45.0 |
| PGSC0003DMT400057614 | Potato | extracellular | 43.87 | 44.16 |
| Os03t0676300-01 | Rice | extracellular | 46.45 | 43.9 |
| TraesCS4A01G290900.1 | Wheat | extracellular | 44.52 | 42.33 |
| Zm00001d013551_P001 | Maize | endoplasmic reticulum, plasma membrane | 44.52 | 41.82 |
| EER93676 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 45.16 | 38.46 |
| KXG24122 | Sorghum | plastid | 45.16 | 34.83 |
| Zm00001d031191_P001 | Maize | extracellular | 34.19 | 33.97 |
Protein Annotations
Description
AT4G21620 (E=9e-018) | glycine-rich protein
Coordinates
chrA09:+:8404332..8404799
Molecular Weight (calculated)
15886.2 Da
IEP (calculated)
10.120
GRAVY (calculated)
-0.425
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTKLIVLFT LLLLTLTLSH SRPTGPESVS DQLKKSSKGN NNKNDKGYGS GGYFGPGTGS VPGTGFGLPG FTGKDWGNIG GGYGGGYGGP TGGYNKGGVV
101: RPTVVCKEKG HCYMKKLRCP AKCFKSFSRS GKGYGGGGGG GGCTIDCKKK CMAYC
101: RPTVVCKEKG HCYMKKLRCP AKCFKSFSRS GKGYGGGGGG GGCTIDCKKK CMAYC
001: MATKLNLLFT ILLLTLTLSH SRPARPESSS STGSYSDQLK KHSKDNYNKG YGSGGYPGLT TEPATGFILP GSGPGGSYSE LSGGYSKGRG VRLTVMCEEK
101: GHCYMKKLTC PAKCFKSLSR KGKGYGGGGG GCTIDCKKCV AYC
101: GHCYMKKLTC PAKCFKSLSR KGKGYGGGGG GCTIDCKKCV AYC
Arabidopsis Description
At1g61255 [Source:UniProtKB/TrEMBL;Acc:O22721]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.