Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX98689 | Canola | extracellular | 99.25 | 99.25 |
| CDX94042 | Canola | extracellular | 96.99 | 96.99 |
| AT4G21620.1 | Thale cress | extracellular | 89.47 | 90.84 |
| Bra020903.1-P | Field mustard | extracellular | 88.72 | 90.08 |
| GSMUA_Achr6P30210_001 | Banana | cytosol, extracellular, plastid | 39.1 | 65.0 |
| VIT_13s0073g00040.t01 | Wine grape | cytosol, extracellular, plastid | 36.84 | 60.49 |
| Solyc10g009190.1.1 | Tomato | nucleus | 53.38 | 56.8 |
| PGSC0003DMT400028050 | Potato | extracellular | 51.13 | 54.4 |
| Bra027092.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 60.9 | 52.26 |
| KRH10772 | Soybean | extracellular | 57.14 | 52.05 |
| GSMUA_Achr4P32330_001 | Banana | extracellular | 54.89 | 50.34 |
| VIT_00s0301g00040.t01 | Wine grape | extracellular | 57.89 | 49.68 |
| Solyc02g078850.1.1 | Tomato | extracellular, nucleus | 54.14 | 49.66 |
| KRH21551 | Soybean | cytosol, extracellular, mitochondrion, vacuole | 60.9 | 48.21 |
| Os03t0676300-01 | Rice | extracellular | 59.4 | 48.17 |
| TraesCS4D01G020900.1 | Wheat | extracellular | 57.14 | 47.5 |
| GSMUA_Achr7P00710_001 | Banana | extracellular | 50.38 | 47.18 |
| GSMUA_Achr5P01900_001 | Banana | extracellular | 48.87 | 47.1 |
| GSMUA_Achr9P26340_001 | Banana | extracellular | 48.12 | 46.04 |
| Zm00001d013551_P001 | Maize | endoplasmic reticulum, plasma membrane | 54.89 | 44.24 |
| PGSC0003DMT400057614 | Potato | extracellular | 51.13 | 44.16 |
| TraesCS4A01G290900.1 | Wheat | extracellular | 51.88 | 42.33 |
| EER93676 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 57.89 | 42.31 |
| Zm00001d031191_P001 | Maize | extracellular | 46.62 | 39.74 |
| KXG24122 | Sorghum | plastid | 54.14 | 35.82 |
Protein Annotations
Description
AT4G21620 (E=2e-034) | glycine-rich protein
Coordinates
chrA03:+:24169166..24169567
Molecular Weight (calculated)
13057.9 Da
IEP (calculated)
10.149
GRAVY (calculated)
-0.059
Length
133 amino acids
Sequence
(BLAST)
(BLAST)
001: MFAKPILLAS LLLIIFVSAT HSARQKSGNN GLGFAGVPGS GYAGIPGFGN GFPGTGVGGG YGGGYGGPSG GYGKGGVVRP TVTCKEKGPC NGKKLRCPAR
101: CFSSFSRSGK GYGGGGGGGG CTMDCKKKCI AYC
101: CFSSFSRSGK GYGGGGGGGG CTMDCKKKCI AYC
001: MFTKSILLAS LLIIILVSAT ESARQKSGND GLGFGGVPGS GFIPGFGNGF PGTGVGGGYG GGFGGPSGGF GKGGVVRPTV TCKEKGPCNG KKLRCPAKCF
101: KSFSRSGKGY GGGGGGGGCT MDCKKKCIAY C
101: KSFSRSGKGY GGGGGGGGCT MDCKKKCIAY C
Arabidopsis Description
AT4g21620/F17L22_80 [Source:UniProtKB/TrEMBL;Acc:Q9SVT5]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.