Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P30210_001 | Banana | cytosol, extracellular, plastid | 31.41 | 61.25 |
| VIT_13s0073g00040.t01 | Wine grape | cytosol, extracellular, plastid | 26.28 | 50.62 |
| Zm00001d013551_P001 | Maize | endoplasmic reticulum, plasma membrane | 49.36 | 46.67 |
| Bra038769.1-P | Field mustard | extracellular | 39.74 | 46.62 |
| GSMUA_Achr7P00710_001 | Banana | extracellular | 42.31 | 46.48 |
| CDX94042 | Canola | extracellular | 39.1 | 45.86 |
| CDX98689 | Canola | extracellular | 39.1 | 45.86 |
| KXG24122 | Sorghum | plastid | 57.05 | 44.28 |
| AT4G21620.1 | Thale cress | extracellular | 36.54 | 43.51 |
| CDX76436 | Canola | extracellular | 36.54 | 43.51 |
| Bra020903.1-P | Field mustard | extracellular | 36.54 | 43.51 |
| Solyc10g009190.1.1 | Tomato | nucleus | 34.62 | 43.2 |
| GSMUA_Achr4P32330_001 | Banana | extracellular | 39.1 | 42.07 |
| GSMUA_Achr9P26340_001 | Banana | extracellular | 37.18 | 41.73 |
| VIT_00s0301g00040.t01 | Wine grape | extracellular | 41.03 | 41.29 |
| PGSC0003DMT400028050 | Potato | extracellular | 32.69 | 40.8 |
| KRH10772 | Soybean | extracellular | 37.82 | 40.41 |
| GSMUA_Achr5P01900_001 | Banana | extracellular | 35.26 | 39.86 |
| Solyc02g078850.1.1 | Tomato | extracellular, nucleus | 33.97 | 36.55 |
| CDY40955 | Canola | extracellular | 34.62 | 34.84 |
| Bra027092.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 33.97 | 34.19 |
| CDY12893 | Canola | endoplasmic reticulum, extracellular, vacuole | 33.97 | 34.19 |
| KRH21551 | Soybean | cytosol, extracellular, mitochondrion, vacuole | 35.9 | 33.33 |
| AT1G61255.1 | Thale cress | extracellular | 30.13 | 32.87 |
| PGSC0003DMT400057614 | Potato | extracellular | 32.05 | 32.47 |
| CDY31419 | Canola | extracellular | 16.03 | 31.25 |
Protein Annotations
| EMBL:BT064148 | EnsemblPlants:Zm00001d031191_P001 | EnsemblPlants:Zm00001d031191_T001 | EnsemblPlantsGene:Zm00001d031191 | EntrezGene:100382392 | PANTHER:PTHR34789 |
| PANTHER:PTHR34789:SF1 | ProteinID:ONM02295.1 | SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0001948C7F |
| UniProt:C0P779 | MapMan:35.2 | : | : | : | : |
Description
glycine-rich protein
Coordinates
chr1:-:181717545..181718015
Molecular Weight (calculated)
15395.0 Da
IEP (calculated)
8.203
GRAVY (calculated)
-0.176
Length
156 amino acids
Sequence
(BLAST)
(BLAST)
001: MAARHHAPHL LAMLMLSAAG FFSVASAARD LDAANPLAVA VAAPAAGRNN DNNNPPEPNY YSYHGGYGAV PAGYGPAGVS GAGGWGAGSG GGGGYAHGGV
101: EAPTVMCQDK GPCYGKKVAC PKRCFWSYSR SGSGYGAGGG GGSCTVDCKD KCTATC
101: EAPTVMCQDK GPCYGKKVAC PKRCFWSYSR SGSGYGAGGG GGSCTVDCKD KCTATC
001: MFTKSILLAS LLIIILVSAT ESARQKSGND GLGFGGVPGS GFIPGFGNGF PGTGVGGGYG GGFGGPSGGF GKGGVVRPTV TCKEKGPCNG KKLRCPAKCF
101: KSFSRSGKGY GGGGGGGGCT MDCKKKCIAY C
101: KSFSRSGKGY GGGGGGGGCT MDCKKKCIAY C
Arabidopsis Description
AT4g21620/F17L22_80 [Source:UniProtKB/TrEMBL;Acc:Q9SVT5]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.