Factsheet for GSMUA_Achr7P00710_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P30210_001	Banana	cytosol, extracellular, plastid	42.96	76.25
GSMUA_Achr4P32330_001	Banana	extracellular	69.01	67.59
GSMUA_Achr5P01900_001	Banana	extracellular	62.68	64.49
GSMUA_Achr9P26340_001	Banana	extracellular	57.04	58.27
VIT_13s0073g00040.t01	Wine grape	cytosol, extracellular, plastid	33.1	58.02
AT4G21620.1	Thale cress	extracellular	48.59	52.67
VIT_00s0301g00040.t01	Wine grape	extracellular	57.04	52.26
Bra020903.1-P	Field mustard	extracellular	47.89	51.91
CDX76436	Canola	extracellular	47.89	51.91
KRH10772	Soybean	extracellular	52.82	51.37
Solyc10g009190.1.1	Tomato	nucleus	45.07	51.2
Bra038769.1-P	Field mustard	extracellular	47.18	50.38
CDX98689	Canola	extracellular	46.48	49.62
PGSC0003DMT400028050	Potato	extracellular	43.66	49.6
CDX94042	Canola	extracellular	45.77	48.87
CDY40955	Canola	extracellular	52.82	48.39
Bra027092.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	52.11	47.74
CDY12893	Canola	endoplasmic reticulum, extracellular, vacuole	52.11	47.74
Os03t0676300-01	Rice	extracellular	54.93	47.56
Solyc02g078850.1.1	Tomato	extracellular, nucleus	47.89	46.9
TraesCS4D01G020900.1	Wheat	extracellular	52.82	46.88
KRH21551	Soybean	cytosol, extracellular, mitochondrion, vacuole	54.23	45.83
Zm00001d013551_P001	Maize	endoplasmic reticulum, plasma membrane	51.41	44.24
AT1G61255.1	Thale cress	extracellular	42.96	42.66
Zm00001d031191_P001	Maize	extracellular	46.48	42.31
PGSC0003DMT400057614	Potato	extracellular	44.37	40.91
EER93676	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	50.7	39.56
KXG24122	Sorghum	plastid	55.63	39.3
TraesCS4A01G290900.1	Wheat	extracellular	44.37	38.65
CDY31419	Canola	extracellular	20.42	36.25

Protein Annotations

EnsemblPlants:GSMUA_Achr7P00710_001	EnsemblPlants:GSMUA_Achr7T00710_001	EnsemblPlantsGene:GSMUA_Achr7G00710_001	PANTHER:PTHR34789	PANTHER:PTHR34789:SF1	SEG:seg
SignalP:SignalP-noTM	UniParc:UPI000296EE0D	UniProt:M0TDL1	MapMan:35.2	:	:

Description

Putative nucleic acid binding protein (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr7G00710_001]

Coordinates

chr7:-:585781..586561

Molecular Weight (calculated)

13742.4 Da

IEP (calculated)

9.463

GRAVY (calculated)

0.011

Length

142 amino acids

Sequence
(BLAST)

001: MKKTSLLFSL LFLAAAATFC SAARDLDAEL AKGHGGGGGG GAGIPGFGSD PGGFFGPGGG FNVPGFGGGW GAGFGGPSGG HARGGVVRPS VVCSDKGPCY
101: KKRVTCPAKC FSSFSRSGKG YGGGGGGGGC TIDCKKRCVA YC

Best Arabidopsis Sequence Match ( AT4G21620.1 )
(BLAST)

001: MFTKSILLAS LLIIILVSAT ESARQKSGND GLGFGGVPGS GFIPGFGNGF PGTGVGGGYG GGFGGPSGGF GKGGVVRPTV TCKEKGPCNG KKLRCPAKCF
101: KSFSRSGKGY GGGGGGGGCT MDCKKKCIAY C

Arabidopsis Description

AT4g21620/F17L22_80 [Source:UniProtKB/TrEMBL;Acc:Q9SVT5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.