CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P30210_001	Banana	cytosol, extracellular, plastid	26.37	66.25
Zm00001d031191_P001	Maize	extracellular	44.28	57.05
GSMUA_Achr7P00710_001	Banana	extracellular	39.3	55.63
VIT_13s0073g00040.t01	Wine grape	cytosol, extracellular, plastid	22.39	55.56
Bra038769.1-P	Field mustard	extracellular	35.82	54.14
CDX94042	Canola	extracellular	35.32	53.38
CDX98689	Canola	extracellular	35.32	53.38
AT4G21620.1	Thale cress	extracellular	33.83	51.91
Bra020903.1-P	Field mustard	extracellular	33.83	51.91
CDX76436	Canola	extracellular	33.83	51.91
GSMUA_Achr4P32330_001	Banana	extracellular	37.31	51.72
VIT_00s0301g00040.t01	Wine grape	extracellular	37.81	49.03
GSMUA_Achr9P26340_001	Banana	extracellular	33.83	48.92
KRH10772	Soybean	extracellular	34.83	47.95
GSMUA_Achr5P01900_001	Banana	extracellular	32.34	47.1
PGSC0003DMT400028050	Potato	extracellular	28.86	46.4
Solyc10g009190.1.1	Tomato	nucleus	28.86	46.4
CDY40955	Canola	extracellular	35.32	45.81
CDY12893	Canola	endoplasmic reticulum, extracellular, vacuole	34.83	45.16
Bra027092.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	34.83	45.16
CDY31419	Canola	extracellular	17.91	45.0
KRH21551	Soybean	cytosol, extracellular, mitochondrion, vacuole	36.82	44.05
Solyc02g078850.1.1	Tomato	extracellular, nucleus	29.85	41.38
EER93676	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	37.31	41.21
AT1G61255.1	Thale cress	extracellular	27.86	39.16
PGSC0003DMT400057614	Potato	extracellular	28.36	37.01

Protein Annotations

EnsemblPlants:KXG24122	EnsemblPlantsGene:SORBI_3008G187800	InterPro:GRP	PANTHER:PTHR34789	PANTHER:PTHR34789:SF1	PFAM:PF07172
ProteinID:KXG24122	ProteinID:KXG24122.1	SEG:seg	UniParc:UPI00081AC868	UniProt:A0A1B6PEJ7	MapMan:35.2

Description

hypothetical protein

Coordinates

chr8:+:62223937..62225801

Molecular Weight (calculated)

20026.5 Da

IEP (calculated)

9.072

GRAVY (calculated)

-0.255

Length

201 amino acids

Sequence
(BLAST)

001: MHIHTHTHAR TTHPSPPAQS TPRTSFPFII VMASAMAPAH HHHRSRTPLL LAILLAAAAA ASVASAARDL DLDAANPLPA PAGRNNNPDP NYYGYGAVPG
101: VGGPAGNGGG FYGGPRYGFG GGGGGGGWGA GYGGSGGGGY AHGGVEVPTV VCQEKGPCYG KKVTCPKRCF WSYSRSGNGY GAGGGGGSCT VDCKAKCTAT
201: C

Best Arabidopsis Sequence Match ( AT4G21620.1 )
(BLAST)

001: MFTKSILLAS LLIIILVSAT ESARQKSGND GLGFGGVPGS GFIPGFGNGF PGTGVGGGYG GGFGGPSGGF GKGGVVRPTV TCKEKGPCNG KKLRCPAKCF
101: KSFSRSGKGY GGGGGGGGCT MDCKKKCIAY C

Arabidopsis Description

AT4g21620/F17L22_80 [Source:UniProtKB/TrEMBL;Acc:Q9SVT5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.