Factsheet for VIT_13s0073g00040.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, cytosol

Predictor Summary:

extracellular 4
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 2
cytosol 3
plastid 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol, extracellular, nucleus, plasma membrane, plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P30210_001	Banana	cytosol, extracellular, plastid	50.62	51.25
VIT_00s0301g00040.t01	Wine grape	extracellular	74.07	38.71
PGSC0003DMT400028050	Potato	extracellular	58.02	37.6
CDX94042	Canola	extracellular	61.73	37.59
AT4G21620.1	Thale cress	extracellular	60.49	37.4
Bra038769.1-P	Field mustard	extracellular	60.49	36.84
CDX98689	Canola	extracellular	60.49	36.84
Solyc10g009190.1.1	Tomato	nucleus	56.79	36.8
Bra020903.1-P	Field mustard	extracellular	58.02	35.88
CDX76436	Canola	extracellular	58.02	35.88
KRH10772	Soybean	extracellular	61.73	34.25
GSMUA_Achr5P01900_001	Banana	extracellular	58.02	34.06
GSMUA_Achr4P32330_001	Banana	extracellular	60.49	33.79
Bra027092.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	64.2	33.55
CDY12893	Canola	endoplasmic reticulum, extracellular, vacuole	64.2	33.55
GSMUA_Achr7P00710_001	Banana	extracellular	58.02	33.1
CDY40955	Canola	extracellular	62.96	32.9
KRH21551	Soybean	cytosol, extracellular, mitochondrion, vacuole	62.96	30.36
GSMUA_Achr9P26340_001	Banana	extracellular	51.85	30.22
AT1G61255.1	Thale cress	extracellular	53.09	30.07
Solyc02g078850.1.1	Tomato	extracellular, nucleus	53.09	29.66
TraesCS4D01G020900.1	Wheat	extracellular	55.56	28.12
Os03t0676300-01	Rice	extracellular	56.79	28.05
PGSC0003DMT400057614	Potato	extracellular	51.85	27.27
Zm00001d013551_P001	Maize	endoplasmic reticulum, plasma membrane	55.56	27.27
TraesCS4A01G290900.1	Wheat	extracellular	54.32	26.99
Zm00001d031191_P001	Maize	extracellular	50.62	26.28
EER93676	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	55.56	24.73
KXG24122	Sorghum	plastid	55.56	22.39
CDY31419	Canola	extracellular	19.75	20.0

Protein Annotations

ArrayExpress:VIT_13s0073g00040	EMBL:FN595510	EnsemblPlants:VIT_13s0073g00040.t01	EnsemblPlantsGene:VIT_13s0073g00040	PANTHER:PTHR34789	PANTHER:PTHR34789:SF1
ProteinID:CBI25026	ProteinID:CBI25026.3	SignalP:SignalP-noTM	UniParc:UPI00015CC088	UniProt:D7T3E1	MapMan:35.2

Description

No Description!

Coordinates

chr13:+:12951743..12957126

Molecular Weight (calculated)

8720.5 Da

IEP (calculated)

9.305

GRAVY (calculated)

-0.373

Length

81 amino acids

Sequence
(BLAST)

1: MHVICFVLSI VGETSPSGGY AKGGTIRPTR VCKEKGPYYQ KKLTCPAKCF TYYSRSGKNY GASGGGDGCT IDCRKKCTAY C

Best Arabidopsis Sequence Match ( AT4G21620.1 )
(BLAST)

001: MFTKSILLAS LLIIILVSAT ESARQKSGND GLGFGGVPGS GFIPGFGNGF PGTGVGGGYG GGFGGPSGGF GKGGVVRPTV TCKEKGPCNG KKLRCPAKCF
101: KSFSRSGKGY GGGGGGGGCT MDCKKKCIAY C

Arabidopsis Description

AT4g21620/F17L22_80 [Source:UniProtKB/TrEMBL;Acc:Q9SVT5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.