CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 5
plasma membrane 7
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d013551_P001	Maize	endoplasmic reticulum, plasma membrane	61.54	67.88
Os03t0676300-01	Rice	extracellular	60.99	67.68
GSMUA_Achr6P30210_001	Banana	cytosol, extracellular, plastid	28.02	63.75
TraesCS4D01G020900.1	Wheat	extracellular	54.4	61.88
Bra020903.1-P	Field mustard	extracellular	41.76	58.02
CDX76436	Canola	extracellular	41.76	58.02
Bra038769.1-P	Field mustard	extracellular	42.31	57.89
CDX98689	Canola	extracellular	42.31	57.89
TraesCS4A01G290900.1	Wheat	extracellular	51.65	57.67
AT4G21620.1	Thale cress	extracellular	41.21	57.25
CDX94042	Canola	extracellular	41.76	57.14
VIT_13s0073g00040.t01	Wine grape	cytosol, extracellular, plastid	24.73	55.56
GSMUA_Achr7P00710_001	Banana	extracellular	39.56	50.7
GSMUA_Achr4P32330_001	Banana	extracellular	40.11	50.34
Solyc10g009190.1.1	Tomato	nucleus	33.52	48.8
CDY31419	Canola	extracellular	21.43	48.75
PGSC0003DMT400028050	Potato	extracellular	32.97	48.0
VIT_00s0301g00040.t01	Wine grape	extracellular	40.66	47.74
GSMUA_Achr9P26340_001	Banana	extracellular	35.71	46.76
GSMUA_Achr5P01900_001	Banana	extracellular	35.16	46.38
CDY40955	Canola	extracellular	39.01	45.81
CDY12893	Canola	endoplasmic reticulum, extracellular, vacuole	38.46	45.16
Bra027092.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	38.46	45.16
KRH10772	Soybean	extracellular	35.71	44.52
Solyc02g078850.1.1	Tomato	extracellular, nucleus	34.62	43.45
AT1G61255.1	Thale cress	extracellular	34.07	43.36
KRH21551	Soybean	cytosol, extracellular, mitochondrion, vacuole	38.46	41.67
PGSC0003DMT400057614	Potato	extracellular	33.52	39.61
KXG24122	Sorghum	plastid	41.21	37.31

Protein Annotations

EnsemblPlants:EER93676	EnsemblPlantsGene:SORBI_3001G138800	EntrezGene:8056724	PANTHER:PTHR34789	PANTHER:PTHR34789:SF1	ProteinID:EER93676
ProteinID:EER93676.1	RefSeq:XP_002466678.1	SEG:seg	SignalP:SignalP-noTM	TMHMM:TMhelix	unigene:Sbi.7627
UniParc:UPI0001A82A16	UniProt:C5WPP4	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:11022646..11025128

Molecular Weight (calculated)

17175.9 Da

IEP (calculated)

10.086

GRAVY (calculated)

0.028

Length

182 amino acids

Sequence
(BLAST)

001: MATATATAAP RHAALLLLLL VGLHATATVA ARAGAAHDAE LTSKPSPGTK KPSVKPPGKP SVKPPPVGPG AGAGGVGGAI PTIPGFGGGI PGMGMGGGGF
101: GSIPGMAGGW GGGYGGPSGG YARGGVVAPT VTCTEKGPCY RKKVTCPKKC FSSYSGAGKG YGGGGGGGSC TVDCKVKCTA YC

Best Arabidopsis Sequence Match ( AT4G21620.1 )
(BLAST)

001: MFTKSILLAS LLIIILVSAT ESARQKSGND GLGFGGVPGS GFIPGFGNGF PGTGVGGGYG GGFGGPSGGF GKGGVVRPTV TCKEKGPCNG KKLRCPAKCF
101: KSFSRSGKGY GGGGGGGGCT MDCKKKCIAY C

Arabidopsis Description

AT4g21620/F17L22_80 [Source:UniProtKB/TrEMBL;Acc:Q9SVT5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.