Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_13s0073g00040.t01 | Wine grape | cytosol, extracellular, plastid | 38.71 | 74.07 |
| GSMUA_Achr6P30210_001 | Banana | cytosol, extracellular, plastid | 36.13 | 70.0 |
| Solyc10g009190.1.1 | Tomato | nucleus | 48.39 | 60.0 |
| PGSC0003DMT400028050 | Potato | extracellular | 47.74 | 59.2 |
| KRH10772 | Soybean | extracellular | 55.48 | 58.9 |
| AT4G21620.1 | Thale cress | extracellular | 49.68 | 58.78 |
| Bra038769.1-P | Field mustard | extracellular | 49.68 | 57.89 |
| GSMUA_Achr4P32330_001 | Banana | extracellular | 53.55 | 57.24 |
| CDX98689 | Canola | extracellular | 49.03 | 57.14 |
| GSMUA_Achr7P00710_001 | Banana | extracellular | 52.26 | 57.04 |
| CDY40955 | Canola | extracellular | 56.77 | 56.77 |
| Bra027092.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 56.77 | 56.77 |
| CDY12893 | Canola | endoplasmic reticulum, extracellular, vacuole | 56.77 | 56.77 |
| Bra020903.1-P | Field mustard | extracellular | 47.74 | 56.49 |
| CDX76436 | Canola | extracellular | 47.74 | 56.49 |
| CDX94042 | Canola | extracellular | 48.39 | 56.39 |
| GSMUA_Achr5P01900_001 | Banana | extracellular | 49.03 | 55.07 |
| KRH21551 | Soybean | cytosol, extracellular, mitochondrion, vacuole | 58.71 | 54.17 |
| GSMUA_Achr9P26340_001 | Banana | extracellular | 48.39 | 53.96 |
| Solyc02g078850.1.1 | Tomato | extracellular, nucleus | 49.68 | 53.1 |
| AT1G61255.1 | Thale cress | extracellular | 47.74 | 51.75 |
| TraesCS4A01G290900.1 | Wheat | extracellular | 50.97 | 48.47 |
| TraesCS4D01G020900.1 | Wheat | extracellular | 48.39 | 46.88 |
| PGSC0003DMT400057614 | Potato | extracellular | 46.45 | 46.75 |
| CDY31419 | Canola | extracellular | 23.87 | 46.25 |
| Os03t0676300-01 | Rice | extracellular | 48.39 | 45.73 |
| Zm00001d013551_P001 | Maize | endoplasmic reticulum, plasma membrane | 45.81 | 43.03 |
| Zm00001d031191_P001 | Maize | extracellular | 41.29 | 41.03 |
| EER93676 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 47.74 | 40.66 |
| KXG24122 | Sorghum | plastid | 49.03 | 37.81 |
Protein Annotations
| ArrayExpress:VIT_00s0301g00040 | EMBL:FN594977 | EnsemblPlants:VIT_00s0301g00040.t01 | EnsemblPlantsGene:VIT_00s0301g00040 | EntrezGene:104878317 | PANTHER:PTHR34789 |
| PANTHER:PTHR34789:SF1 | ProteinID:CCB45164 | ProteinID:CCB45164.1 | RefSeq:XP_010646777.1 | SEG:seg | SignalP:SignalP-noTM |
| TIGR:TC54325 | TMHMM:TMhelix | unigene:Vvi.25170 | UniParc:UPI000210A640 | UniProt:F6GYX8 | MapMan:35.2 |
Description
No Description!
Coordinates
chrUn:-:22149708..22150401
Molecular Weight (calculated)
15723.7 Da
IEP (calculated)
9.459
GRAVY (calculated)
-0.341
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MNNLATSFLL LLLLTTTTTF SFAARPADSF TPELKAVKGK PTTDPNNKGV GSGTDPGNGF FGPGGGFGVP GFENGWGNFG GGYGGGYGGP SGGYSKGGTI
101: RPTVVCKEKG PCYMKKLTCP AKCFTSYSRS GKNYGAGGGG GGCTMDCKKK CTAYC
101: RPTVVCKEKG PCYMKKLTCP AKCFTSYSRS GKNYGAGGGG GGCTMDCKKK CTAYC
001: MFTKSILLAS LLIIILVSAT ESARQKSGND GLGFGGVPGS GFIPGFGNGF PGTGVGGGYG GGFGGPSGGF GKGGVVRPTV TCKEKGPCNG KKLRCPAKCF
101: KSFSRSGKGY GGGGGGGGCT MDCKKKCIAY C
101: KSFSRSGKGY GGGGGGGGCT MDCKKKCIAY C
Arabidopsis Description
AT4g21620/F17L22_80 [Source:UniProtKB/TrEMBL;Acc:Q9SVT5]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.