Subcellular Localization
min:
: max
Winner_takes_all: plastid, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_13s0073g00040.t01 | Wine grape | cytosol, extracellular, plastid | 51.25 | 50.62 |
| GSMUA_Achr9P26340_001 | Banana | extracellular | 83.75 | 48.2 |
| GSMUA_Achr7P00710_001 | Banana | extracellular | 76.25 | 42.96 |
| GSMUA_Achr4P32330_001 | Banana | extracellular | 77.5 | 42.76 |
| Bra020903.1-P | Field mustard | extracellular | 65.0 | 39.69 |
| CDX76436 | Canola | extracellular | 65.0 | 39.69 |
| GSMUA_Achr5P01900_001 | Banana | extracellular | 67.5 | 39.13 |
| Bra038769.1-P | Field mustard | extracellular | 65.0 | 39.1 |
| CDX94042 | Canola | extracellular | 65.0 | 39.1 |
| CDX98689 | Canola | extracellular | 65.0 | 39.1 |
| AT4G21620.1 | Thale cress | extracellular | 63.75 | 38.93 |
| Solyc10g009190.1.1 | Tomato | nucleus | 60.0 | 38.4 |
| PGSC0003DMT400028050 | Potato | extracellular | 57.5 | 36.8 |
| VIT_00s0301g00040.t01 | Wine grape | extracellular | 70.0 | 36.13 |
| CDY40955 | Canola | extracellular | 68.75 | 35.48 |
| Bra027092.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 68.75 | 35.48 |
| CDY12893 | Canola | endoplasmic reticulum, extracellular, vacuole | 68.75 | 35.48 |
| KRH10772 | Soybean | extracellular | 63.75 | 34.93 |
| Os03t0676300-01 | Rice | extracellular | 71.25 | 34.76 |
| Solyc02g078850.1.1 | Tomato | extracellular, nucleus | 61.25 | 33.79 |
| TraesCS4D01G020900.1 | Wheat | extracellular | 67.5 | 33.75 |
| TraesCS4A01G290900.1 | Wheat | extracellular | 68.75 | 33.74 |
| KRH21551 | Soybean | cytosol, extracellular, mitochondrion, vacuole | 67.5 | 32.14 |
| Zm00001d013551_P001 | Maize | endoplasmic reticulum, plasma membrane | 66.25 | 32.12 |
| AT1G61255.1 | Thale cress | extracellular | 56.25 | 31.47 |
| Zm00001d031191_P001 | Maize | extracellular | 61.25 | 31.41 |
| PGSC0003DMT400057614 | Potato | extracellular | 58.75 | 30.52 |
| EER93676 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 63.75 | 28.02 |
| KXG24122 | Sorghum | plastid | 66.25 | 26.37 |
| CDY31419 | Canola | extracellular | 26.25 | 26.25 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P30210_001 | EnsemblPlants:GSMUA_Achr6T30210_001 | EnsemblPlantsGene:GSMUA_Achr6G30210_001 | PANTHER:PTHR34789 | SEG:seg | UniParc:UPI0002954A9E |
| UniProt:M0TBG6 | MapMan:35.2 | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G30210_001]
Coordinates
chr6:+:30265801..30266043
Molecular Weight (calculated)
8131.6 Da
IEP (calculated)
8.559
GRAVY (calculated)
-0.190
Length
80 amino acids
Sequence
(BLAST)
(BLAST)
1: MPGFGGGWGA GYGGWGAGYG RDGVAVPSVV CSDWGPCYNK KLTCPAKCFT SYSRYGRGYG GGGGGGGCTI DCKKYCVAYC
001: MFTKSILLAS LLIIILVSAT ESARQKSGND GLGFGGVPGS GFIPGFGNGF PGTGVGGGYG GGFGGPSGGF GKGGVVRPTV TCKEKGPCNG KKLRCPAKCF
101: KSFSRSGKGY GGGGGGGGCT MDCKKKCIAY C
101: KSFSRSGKGY GGGGGGGGCT MDCKKKCIAY C
Arabidopsis Description
AT4g21620/F17L22_80 [Source:UniProtKB/TrEMBL;Acc:Q9SVT5]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.