Factsheet for GSMUA_Achr9P26340_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
golgi 5
plasma membrane 5
endoplasmic reticulum 6
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P30210_001	Banana	cytosol, extracellular, plastid	48.2	83.75
GSMUA_Achr4P32330_001	Banana	extracellular	60.43	57.93
GSMUA_Achr7P00710_001	Banana	extracellular	58.27	57.04
GSMUA_Achr5P01900_001	Banana	extracellular	52.52	52.9
VIT_13s0073g00040.t01	Wine grape	cytosol, extracellular, plastid	30.22	51.85
Bra020903.1-P	Field mustard	extracellular	47.48	50.38
CDX76436	Canola	extracellular	47.48	50.38
CDX98689	Canola	extracellular	46.76	48.87
AT4G21620.1	Thale cress	extracellular	46.04	48.85
Solyc10g009190.1.1	Tomato	nucleus	43.88	48.8
VIT_00s0301g00040.t01	Wine grape	extracellular	53.96	48.39
CDX94042	Canola	extracellular	46.04	48.12
Bra038769.1-P	Field mustard	extracellular	46.04	48.12
KRH10772	Soybean	extracellular	50.36	47.95
Solyc02g078850.1.1	Tomato	extracellular, nucleus	49.64	47.59
PGSC0003DMT400028050	Potato	extracellular	42.45	47.2
CDY40955	Canola	extracellular	51.8	46.45
CDY12893	Canola	endoplasmic reticulum, extracellular, vacuole	51.8	46.45
Bra027092.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	51.8	46.45
TraesCS4D01G020900.1	Wheat	extracellular	50.36	43.75
TraesCS4A01G290900.1	Wheat	extracellular	50.36	42.94
KRH21551	Soybean	cytosol, extracellular, mitochondrion, vacuole	51.08	42.26
PGSC0003DMT400057614	Potato	extracellular	46.76	42.21
CDY31419	Canola	extracellular	23.74	41.25
Os03t0676300-01	Rice	extracellular	48.2	40.85
Zm00001d013551_P001	Maize	endoplasmic reticulum, plasma membrane	48.2	40.61
AT1G61255.1	Thale cress	extracellular	41.73	40.56
Zm00001d031191_P001	Maize	extracellular	41.73	37.18
EER93676	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	46.76	35.71
KXG24122	Sorghum	plastid	48.92	33.83

Protein Annotations

EnsemblPlants:GSMUA_Achr9P26340_001	EnsemblPlants:GSMUA_Achr9T26340_001	EnsemblPlantsGene:GSMUA_Achr9G26340_001	PANTHER:PTHR34789	SEG:seg	SignalP:SignalP-noTM
UniParc:UPI000296986B	UniProt:M0U3P1	MapMan:35.2	:	:	:

Description

Putative nucleic acid binding protein (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr9G26340_001]

Coordinates

chr9:+:30781386..30781805

Molecular Weight (calculated)

13714.3 Da

IEP (calculated)

8.552

GRAVY (calculated)

-0.146

Length

139 amino acids

Sequence
(BLAST)

001: MKTTALIFFS LLLAAAVAGR DLDKKKAESS KDSAGPATYI PGYGADPGGY FGPGGGFNMP GGFGGGWGAG YGGPGGGYGH DGVVLPSVVC SDKGPCYKKK
101: LTCPASCFTS YSHYGKGGGG GGGGGGCTMD CKKHCVAYC

Best Arabidopsis Sequence Match ( AT4G21620.1 )
(BLAST)

001: MFTKSILLAS LLIIILVSAT ESARQKSGND GLGFGGVPGS GFIPGFGNGF PGTGVGGGYG GGFGGPSGGF GKGGVVRPTV TCKEKGPCNG KKLRCPAKCF
101: KSFSRSGKGY GGGGGGGGCT MDCKKKCIAY C

Arabidopsis Description

AT4g21620/F17L22_80 [Source:UniProtKB/TrEMBL;Acc:Q9SVT5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.