Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 6
- golgi 5
- extracellular 7
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038769.1-P | Field mustard | extracellular | 90.84 | 89.47 |
| Bra020903.1-P | Field mustard | extracellular | 89.31 | 89.31 |
| CDX76436 | Canola | extracellular | 89.31 | 89.31 |
| CDX98689 | Canola | extracellular | 90.08 | 88.72 |
| CDX94042 | Canola | extracellular | 87.79 | 86.47 |
| CDY31419 | Canola | extracellular | 52.67 | 86.25 |
| GSMUA_Achr6P30210_001 | Banana | cytosol, extracellular, plastid | 38.93 | 63.75 |
| VIT_13s0073g00040.t01 | Wine grape | cytosol, extracellular, plastid | 37.4 | 60.49 |
| Solyc10g009190.1.1 | Tomato | nucleus | 57.25 | 60.0 |
| PGSC0003DMT400028050 | Potato | extracellular | 55.73 | 58.4 |
| KRH10772 | Soybean | extracellular | 58.78 | 52.74 |
| Solyc02g078850.1.1 | Tomato | extracellular, nucleus | 58.02 | 52.41 |
| VIT_00s0301g00040.t01 | Wine grape | extracellular | 58.78 | 49.68 |
| GSMUA_Achr5P01900_001 | Banana | extracellular | 51.91 | 49.28 |
| GSMUA_Achr4P32330_001 | Banana | extracellular | 54.2 | 48.97 |
| GSMUA_Achr7P00710_001 | Banana | extracellular | 52.67 | 48.59 |
| KRH21551 | Soybean | cytosol, extracellular, mitochondrion, vacuole | 61.83 | 48.21 |
| PGSC0003DMT400057614 | Potato | extracellular | 55.73 | 47.4 |
| Os03t0676300-01 | Rice | extracellular | 58.02 | 46.34 |
| TraesCS4D01G020900.1 | Wheat | extracellular | 56.49 | 46.25 |
| AT1G61255.1 | Thale cress | extracellular | 50.38 | 46.15 |
| GSMUA_Achr9P26340_001 | Banana | extracellular | 48.85 | 46.04 |
| TraesCS4A01G290900.1 | Wheat | extracellular | 51.91 | 41.72 |
| Zm00001d013551_P001 | Maize | endoplasmic reticulum, plasma membrane | 51.91 | 41.21 |
| EER93676 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 57.25 | 41.21 |
| Zm00001d031191_P001 | Maize | extracellular | 43.51 | 36.54 |
| KXG24122 | Sorghum | plastid | 51.91 | 33.83 |
Protein Annotations
| MapMan:35.2 | EntrezGene:828249 | ProteinID:AEE84481.1 | EMBL:AF360336 | EMBL:AK226947 | ArrayExpress:AT4G21620 |
| EnsemblPlantsGene:AT4G21620 | RefSeq:AT4G21620 | TAIR:AT4G21620 | RefSeq:AT4G21620-TAIR-G | EnsemblPlants:AT4G21620.1 | TAIR:AT4G21620.1 |
| EMBL:AY051071 | EMBL:AY058136 | EMBL:AY085743 | ProteinID:CAB36806.1 | ProteinID:CAB81269.1 | GO:GO:0008150 |
| RefSeq:NP_193893.1 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PANTHER:PTHR34789 | PANTHER:PTHR34789:SF1 | UniProt:Q9SVT5 | SignalP:SignalP-noTM | UniParc:UPI000009EEBB |
| SEG:seg | : | : | : | : | : |
Description
AT4g21620/F17L22_80 [Source:UniProtKB/TrEMBL;Acc:Q9SVT5]
Coordinates
chr4:+:11491264..11492216
Molecular Weight (calculated)
12859.7 Da
IEP (calculated)
10.182
GRAVY (calculated)
-0.015
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MFTKSILLAS LLIIILVSAT ESARQKSGND GLGFGGVPGS GFIPGFGNGF PGTGVGGGYG GGFGGPSGGF GKGGVVRPTV TCKEKGPCNG KKLRCPAKCF
101: KSFSRSGKGY GGGGGGGGCT MDCKKKCIAY C
101: KSFSRSGKGY GGGGGGGGCT MDCKKKCIAY C
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.