CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88861	Canola	endoplasmic reticulum	99.39	23.13
CDY45109	Canola	plasma membrane	1.83	0.84
GSMUA_Achr5P06120_001	Banana	cytosol, plasma membrane, vacuole	1.83	0.71
Solyc06g008890.2.1	Tomato	plasma membrane	0.61	0.41
OQU79589	Sorghum	plasma membrane	0.31	0.16
Os06t0142650-00	Rice	plasma membrane	0.0	0.0
HORVU7Hr1G020720.3	Barley	plasma membrane	0.0	0.0
KRH03737	Soybean	plasma membrane	0.0	0.0
KRH54870	Soybean	plasma membrane	0.0	0.0
KRH56640	Soybean	golgi, plasma membrane	0.0	0.0
KRH63022	Soybean	plasma membrane	0.0	0.0
KXG19268	Sorghum	plasma membrane	0.0	0.0
Os01t0648600-00	Rice	plasma membrane	0.0	0.0
CDY46464	Canola	plasma membrane	0.0	0.0
PGSC0003DMT400037904	Potato	plasma membrane, vacuole	0.0	0.0
PGSC0003DMT400056565	Potato	plasma membrane	0.0	0.0
TraesCS4A01G390900.1	Wheat	plasma membrane	0.0	0.0
TraesCS7A01G091000.1	Wheat	plasma membrane	0.0	0.0
TraesCS7D01G086800.1	Wheat	plasma membrane	0.0	0.0
VIT_11s0016g04840.t01	Wine grape	plasma membrane	0.0	0.0
Zm00001d045388_P001	Maize	plasma membrane	0.0	0.0
CDX91781	Canola	extracellular, plasma membrane, vacuole	0.0	0.0
CDX68834	Canola	plasma membrane	0.0	0.0
CDX70909	Canola	plasma membrane	0.0	0.0
CDX72354	Canola	plasma membrane	0.0	0.0
CDX75235	Canola	endoplasmic reticulum, plasma membrane	0.0	0.0
CDX80408	Canola	cytosol	0.0	0.0
CDX80409	Canola	plasma membrane	0.0	0.0
CDX88071	Canola	plasma membrane	0.0	0.0
CDX90728	Canola	plasma membrane	0.0	0.0
EES01170	Sorghum	plasma membrane, plastid	0.0	0.0
CDX95197	Canola	plasma membrane	0.0	0.0
CDY03159	Canola	plasma membrane	0.0	0.0
CDY13481	Canola	plasma membrane	0.0	0.0
CDY23321	Canola	plasma membrane	0.0	0.0
CDY24320	Canola	plasma membrane	0.0	0.0
CDY39882	Canola	plasma membrane	0.0	0.0
CDY42356	Canola	plasma membrane	0.0	0.0
AT5G20050.1	Thale cress	plasma membrane	0.0	0.0

Protein Annotations

Gene3D:2.40.30.10	Gene3D:3.40.50.80	MapMan:50.1.6	GO:A0A078C1M7	EnsemblPlants:CDX70911	ProteinID:CDX70911
ProteinID:CDX70911.1	InterPro:Fd_Rdtase_FAD-bd	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	GO:GO:0003674	GO:GO:0003824	GO:GO:0004128
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00140819001	InterPro:IPR017927
InterPro:NADH-Cyt_B5_reductase	InterPro:OxRdtase_FAD-bd_dom	InterPro:OxRdtase_FAD/NAD-bd	PFAM:PF00175	PFAM:PF00970	PRINTS:PR00371
PRINTS:PR00406	PFscan:PS51384	PANTHER:PTHR19370	PANTHER:PTHR19370:SF174	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52343
SUPFAM:SSF63380	UniParc:UPI0004EE0689	:	:	:	:

Description

BnaC03g09950DNADH-cytochrome b5 reductase-like protein [Source:Projected from Arabidopsis thaliana (AT5G20080) UniProtKB/Swiss-Prot;Acc:P83291]

Coordinates

chrLK031791:+:2674174..2677807

Molecular Weight (calculated)

35754.3 Da

IEP (calculated)

9.562

GRAVY (calculated)

-0.195

Length

327 amino acids

Sequence
(BLAST)

001: MATFFRRLAR SAPIAFPAAL RSQIKSGHGT FRFSAGAIAA LSGGFSCYYL TSGNNLAYLD QAKEETGPKT ALNPDKWLEF KLQDTATVSH NTKLFRFSFD
101: PSANLGLHVA SCLLTRAPLG YNAEGKTKYV VRPYTPISDP EAKGYFDLLI KVYPDGKMSQ HFASLKPGDV LEVKGPIEKF KYSPNMKKHI GMIAGGSGIT
201: PMLQVIDTIV KNPEDNTKIT LLYANVSPDD ILLKQKLDAL QANHPNLKVF YTVDNPTKNW KGGVGYVSKD MALKGLPLPA DDTLILVCGP PGMMEHVSGG
301: KAPDWSQGEV KGILKELGFT EQMVFKF

Best Arabidopsis Sequence Match ( AT5G20080.1 )
(BLAST)

001: MATSFFRRLA RSAPITFPVA FGSQSKSGSG AFRFSTGAIA ALSGGFSYYY LTSGNNLVYL DQAKEETGPK TALNPDKWLE FKLQDTARVS HNTQLFRFSF
101: DPSAELGLHV ASCLLTRAPL GYNAEGKTKY VIRPYTPISD PEAKGYFDLL IKVYPDGKMS QHFASLKPGD VLEVKGPVEK FKYSPNMKKH IGMIAGGSGI
201: TPMLQVIDAI VKNPEDNTQI SLLYANVSPD DILLKQKLDV LQANHPNLKI FYTVDNPTKN WKGGVGYISK DMALKGLPLP TDDTLILVCG PPGMMEHISG
301: GKAPDWSQGE VKGILKELGY TEEMVFKF

Arabidopsis Description

CBR2NADH-cytochrome b5 reductase-like protein [Source:UniProtKB/Swiss-Prot;Acc:P83291]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.