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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 4
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX70909 Canola plasma membrane 80.97 83.18
KRH56640 Soybean golgi, plasma membrane 54.42 62.76
KRH03737 Soybean plasma membrane 61.28 61.83
VIT_11s0016g04840.t01 Wine grape plasma membrane 61.28 61.56
PGSC0003DMT400056565 Potato plasma membrane 58.19 59.1
KRH54870 Soybean plasma membrane 58.85 58.59
KRH63022 Soybean plasma membrane 55.75 57.4
Solyc06g008890.2.1 Tomato plasma membrane 58.19 54.12
Bra020082.1-P Field mustard plasma membrane 81.19 53.11
CDY45109 Canola plasma membrane 84.07 53.07
Bra006536.1-P Field mustard plasma membrane, vacuole 70.13 50.32
TraesCS7A01G091000.1 Wheat plasma membrane 47.57 47.36
Os06t0142650-00 Rice plasma membrane 48.23 47.29
TraesCS4A01G390900.1 Wheat plasma membrane 47.57 47.05
KXG19268 Sorghum plasma membrane 47.12 46.81
Zm00001d045388_P001 Maize plasma membrane 46.46 46.67
TraesCS7D01G086800.1 Wheat plasma membrane 45.35 45.66
HORVU7Hr1G020720.3 Barley plasma membrane 44.47 43.7
PGSC0003DMT400037904 Potato plasma membrane, vacuole 36.28 34.53
Os01t0648600-00 Rice plasma membrane 34.73 31.03
EES01170 Sorghum plasma membrane, plastid 33.85 30.3
GSMUA_Achr5P06120_001 Banana cytosol, plasma membrane, vacuole 49.34 26.24
OQU79589 Sorghum plasma membrane 34.29 24.76
CDX88861 Canola endoplasmic reticulum 70.35 22.63
AT4G32300.1 Thale cress plasma membrane 34.73 19.12
AT5G24080.2 Thale cress plasma membrane 33.85 17.55
AT1G34300.1 Thale cress plasma membrane 31.86 17.37
AT5G35370.1 Thale cress plasma membrane 32.52 16.86
CDX70911 Canola mitochondrion 0.0 0.0
Bra006538.1-P Field mustard mitochondrion 0.0 0.0
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.24.2Gene3D:3.30.200.20EntrezGene:832127ProteinID:AED92786.1EMBL:AF296836
ArrayExpress:AT5G20050EnsemblPlantsGene:AT5G20050RefSeq:AT5G20050TAIR:AT5G20050RefSeq:AT5G20050-TAIR-GEnsemblPlants:AT5G20050.1
TAIR:AT5G20050.1EMBL:AY037215EMBL:AY086017EMBL:BT002682GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0005623GO:GO:0005886GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740
GO:GO:0019538InterPro:IPR000719InterPro:Kinase-like_dom_sfRefSeq:NP_197505.1PFAM:PF00069PO:PO:0000013
PO:PO:0000037PO:PO:0000084PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078
PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098
PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019
PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029
PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052
PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281
ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27002PANTHER:PTHR27002:SF75InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BSUniProt:Q94C25SMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASTMHMM:TMhelix
UniParc:UPI0000048B7ASEG:seg::::
Description
Probable receptor-like protein kinase At5g20050 [Source:UniProtKB/Swiss-Prot;Acc:Q94C25]
Coordinates
chr5:+:6774102..6775935
Molecular Weight (calculated)
51217.5 Da
IEP (calculated)
9.327
GRAVY (calculated)
-0.115
Length
452 amino acids
Sequence
(BLAST)
001: MEDKKANIIA TILILALVVV IIAARVSLKL SKTFYLIAGV DISLILAVIC FLIIRSRYNK ERKLLVSRFA SEGRELRIEY SFLRKVAGVP TKFKLEDLEE
101: ATDGFRSLIG KGGSGSVFKG VLKDGSQVAV KRIEGEEKGE REFRSEVAAI ASVQHKNLVR LYGYSSSTSA NRPRFLVYDY IVNSSLDIWI FPDRGNRGRS
201: GGGCLSWEQR YQVAIDVAKA LAYLHHDCRS KILHLDVKPE NILLDENFRA VVTDFGLSKL IARDESRVLT DIRGTRGYLA PEWLLEHGIS EKSDVYSYGI
301: VLLEMIGGRR SISRVEVKET KKKKLEYFPR IVNQKMRERK IMEIVDQRLI EVNEVDEEEV MKLVCVALWC IQEKSKKRPD MTMVIEMLEG RVPVNEPPDS
401: DVVVVDLLAA DDDDASTGVR RVVNIPKLQI HRERNFRLSS ICSSIISPIS PR
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.