Factsheet for PGSC0003DMT400037904

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

plastid 1
cytosol 1
vacuole 1
nucleus 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400056565	Potato	plasma membrane	52.63	56.18
Solyc06g008890.2.1	Tomato	plasma membrane	50.95	49.79
VIT_11s0016g04840.t01	Wine grape	plasma membrane	40.21	42.44
KRH54870	Soybean	plasma membrane	37.26	38.99
KRH63022	Soybean	plasma membrane	35.79	38.72
PGSC0003DMT400044735	Potato	cytosol	14.11	38.07
KRH03737	Soybean	plasma membrane	35.58	37.72
AT5G20050.1	Thale cress	plasma membrane	34.53	36.28
CDX70909	Canola	plasma membrane	33.47	36.14
Os06t0142650-00	Rice	plasma membrane	34.95	36.01
KRH56640	Soybean	golgi, plasma membrane	29.68	35.97
TraesCS7A01G091000.1	Wheat	plasma membrane	33.47	35.02
TraesCS4A01G390900.1	Wheat	plasma membrane	33.47	34.79
KXG19268	Sorghum	plasma membrane	32.84	34.29
TraesCS7D01G086800.1	Wheat	plasma membrane	32.0	33.85
Zm00001d045388_P001	Maize	plasma membrane	31.79	33.56
HORVU7Hr1G020720.3	Barley	plasma membrane	30.74	31.74
Os01t0648600-00	Rice	plasma membrane	25.26	23.72
Bra020082.1-P	Field mustard	plasma membrane	33.89	23.3
CDY45109	Canola	plasma membrane	34.32	22.77
Bra006536.1-P	Field mustard	plasma membrane, vacuole	29.26	22.06
EES01170	Sorghum	plasma membrane, plastid	23.37	21.98
PGSC0003DMT400044620	Potato	cytosol	20.84	19.22
OQU79589	Sorghum	plasma membrane	24.21	18.37
PGSC0003DMT400044506	Potato	plasma membrane	20.84	18.3
GSMUA_Achr5P06120_001	Banana	cytosol, plasma membrane, vacuole	31.37	17.53
PGSC0003DMT400082723	Potato	endoplasmic reticulum, nucleus, plasma membrane, plastid	25.26	15.54
PGSC0003DMT400074356	Potato	cytosol, nucleus, plasma membrane	23.37	14.7
PGSC0003DMT400044522	Potato	cytosol, nucleus, plasma membrane	22.32	14.56
PGSC0003DMT400070026	Potato	endoplasmic reticulum, plasma membrane, vacuole	26.11	14.09
PGSC0003DMT400002386	Potato	plasma membrane	24.84	13.55
PGSC0003DMT400077643	Potato	plasma membrane	23.37	13.26
PGSC0003DMT400044528	Potato	plasma membrane	23.16	13.0
PGSC0003DMT400044608	Potato	plasma membrane	22.74	12.84
PGSC0003DMT400044668	Potato	plasma membrane	22.74	12.83
PGSC0003DMT400044515	Potato	plasma membrane	22.53	12.81
PGSC0003DMT400044673	Potato	plasma membrane	22.32	12.74
PGSC0003DMT400073253	Potato	plasma membrane	22.32	12.73
PGSC0003DMT400096753	Potato	plasma membrane	22.32	12.73
PGSC0003DMT400044503	Potato	extracellular, plasma membrane, vacuole	21.68	12.48
CDX88861	Canola	endoplasmic reticulum	29.26	9.89
CDX70911	Canola	mitochondrion	0.0	0.0
Bra006538.1-P	Field mustard	mitochondrion	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.10.10	MapMan:50.2.7	InterPro:ARM-like	InterPro:ARM-type_fold	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR011989	InterPro:Kinase-like_dom_sf	UniProt:M1B639	PFAM:PF00069
EnsemblPlantsGene:PGSC0003DMG400014623	PGSC:PGSC0003DMG400014623	EnsemblPlants:PGSC0003DMT400037904	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27002
PANTHER:PTHR27002:SF75	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF48371	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI000296E7A9	SEG:seg	:	:	:	:

Description

Avr9/Cf-9 rapidly elicited protein 11 [Source:PGSC_GENE;Acc:PGSC0003DMG400014623]

Coordinates

chr6:-:681282..684517

Molecular Weight (calculated)

52823.7 Da

IEP (calculated)

8.020

GRAVY (calculated)

0.041

Length

475 amino acids

Sequence
(BLAST)

001: RLAIALGRDA ILPNCPVCLF KFLHDQDWRI HHAAVTAIGL ISDGCSKALL VEMVKFGQSI VNLMQDSHPR LLPTLIEVLD DFDYPRLQTR VASVIRLFSR
101: NCRADDLKLY LRKIVSKLVR FLQRGLAMMK EAALETLASV AISSQVTAVL ISLQETQTEI EDPMRKFSLL AYGRLCKCLG EDFLPYLSLA MPIVLKSAQL
201: SVSNSSDTDD SDDESLFVCA LKSTYSQIPG SRLRCRVGLD VAKALSYLHH DCRSCILHLD VKPENILLNE NHRAILADFG LSKLMGKVES RVVTTIKGTR
301: GYLAPEWLLE NGISEKSDVY SYGMVLLEMI GGRRNITLAE NGKSINSKSK FSYFPKIVSE KLEQGKIMEV LDERLVHEAA TGGVAVEMQV KRLACVALSC
401: IQERPSLRPT MARVVEMLEG RGPVEAPRQT TMLILDLLDE GVDHHPGIPR VAATMARSSD TNSLRFYTMS ILSGR

Best Arabidopsis Sequence Match ( AT4G00340.1 )
(BLAST)

001: MPCTTYLPLL LLLFLLPPPS VQSKVIIKGN QTILSFKAIF RLGFFSTTNG SSNWYLGISY ASMPTPTHVW VANRIRPVSD PDSSTLELTS TGYLIVSNLR
101: DGVVWQTDNK QPGTDFRFSE TGNLILINDD GSPVWQSFDN PTDTWLPGMN VTGLTAMTSW RSLFDPSPGF YSLRLSPSFN EFQLVYKGTT PYWSTGNWTG
201: EAFVGVPEMT IPYIYRFHFV NPYTPTASFW YIVPPLDSVS EPRLTRFMVG ANGQLKQYTW DPQTQSWNMF WLQPEDPCRV YNLCGQLGFC SSELLKPCAC
301: IRGFRPRNDA AWRSDDYSDG CRRENGDSGE KSDTFEAVGD LRYDGDVKMS RLQVSKSSCA KTCLGNSSCV GFYHKEKSNL CKILLESPNN LKNSSSWTGV
401: SEDVLYIREP KKGNSKGNIS KSIIILCSVV GSISVLGFTL LVPLILLKRS RKRKKTRKQD EDGFAVLNLK VFSFKELQSA TNGFSDKVGH GGFGAVFKGT
501: LPGSSTFVAV KRLERPGSGE SEFRAEVCTI GNIQHVNLVR LRGFCSENLH RLLVYDYMPQ GSLSSYLSRT SPKLLSWETR FRIALGTAKG IAYLHEGCRD
601: CIIHCDIKPE NILLDSDYNA KVSDFGLAKL LGRDFSRVLA TMRGTWGYVA PEWISGLPIT TKADVYSFGM TLLELIGGRR NVIVNSDTLG EKETEPEKWF
701: FPPWAAREII QGNVDSVVDS RLNGEYNTEE VTRMATVAIW CIQDNEEIRP AMGTVVKMLE GVVEVTVPPP PKLIQALVSG DSYRGVSGTS CSEGHGCSDL
801: NTGLSSPGSR SSFGRPSP

Arabidopsis Description

RLK4receptor-like protein kinase 4 [Source:TAIR;Acc:AT4G00340]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.