Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 6
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra006538.1-P Field mustard mitochondrion 23.2 99.39
CDX70911 Canola mitochondrion 23.13 99.39
Bra006536.1-P Field mustard plasma membrane, vacuole 44.48 99.21
CDX70909 Canola plasma membrane 24.77 79.09
CDY45109 Canola plasma membrane 38.79 76.12
AT5G20050.1 Thale cress plasma membrane 22.63 70.35
VIT_11s0016g04840.t01 Wine grape plasma membrane 16.94 52.89
KRH56640 Soybean golgi, plasma membrane 14.73 52.81
KRH03737 Soybean plasma membrane 16.51 51.79
PGSC0003DMT400056565 Potato plasma membrane 16.09 50.79
KRH54870 Soybean plasma membrane 15.94 49.34
Solyc06g008890.2.1 Tomato plasma membrane 16.94 48.97
KRH63022 Soybean plasma membrane 15.23 48.75
Zm00001d045388_P001 Maize plasma membrane 13.45 42.0
Os06t0142650-00 Rice plasma membrane 13.74 41.87
GSMUA_Achr5P06120_001 Banana cytosol, plasma membrane, vacuole 25.27 41.76
KXG19268 Sorghum plasma membrane 13.24 40.88
TraesCS4A01G390900.1 Wheat plasma membrane 13.17 40.48
TraesCS7A01G091000.1 Wheat plasma membrane 13.02 40.31
TraesCS7D01G086800.1 Wheat plasma membrane 12.31 38.53
HORVU7Hr1G020720.3 Barley plasma membrane 12.38 37.83
CDY42356 Canola plasma membrane 9.47 29.82
PGSC0003DMT400037904 Potato plasma membrane, vacuole 9.89 29.26
Os01t0648600-00 Rice plasma membrane 9.54 26.48
EES01170 Sorghum plasma membrane, plastid 9.11 25.35
OQU79589 Sorghum plasma membrane 9.68 21.73
CDX72354 Canola plasma membrane 9.96 17.01
CDX75235 Canola endoplasmic reticulum, plasma membrane 9.75 16.91
CDY13481 Canola plasma membrane 9.82 16.79
CDY23321 Canola plasma membrane 9.82 16.71
CDX90728 Canola plasma membrane 9.18 16.65
CDY39882 Canola plasma membrane 9.75 16.53
CDX80408 Canola cytosol 6.9 16.5
CDX91781 Canola extracellular, plasma membrane, vacuole 8.4 16.23
CDX95197 Canola plasma membrane 9.75 15.89
CDY03159 Canola plasma membrane 9.4 15.77
CDY46464 Canola plasma membrane 9.25 15.7
CDY24320 Canola plasma membrane 9.32 15.54
CDX80409 Canola plasma membrane 9.32 15.38
CDX88071 Canola plasma membrane 9.4 15.0
CDX68834 Canola plasma membrane 8.04 11.51
Protein Annotations
KEGG:00760+3.6.1.22Gene3D:1.10.510.10MapMan:18.4.1.24.2Gene3D:2.40.30.10Gene3D:3.30.200.20Gene3D:3.40.50.1820
Gene3D:3.40.50.80Gene3D:3.90.79.10Gene3D:3.90.79.20GO:A0A078DHX4InterPro:AB_hydrolaseEnsemblPlants:CDX88861
ProteinID:CDX88861ProteinID:CDX88861.1InterPro:Fd_Rdtase_FAD-bdGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016491GO:GO:0016740GO:GO:0016787
GO:GO:0019538GO:GO:0046872GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00148941001InterPro:IPR000086InterPro:IPR000719
InterPro:IPR017927InterPro:IPR029058InterPro:Kinase-like_dom_sfInterPro:NADH-Cyt_B5_reductaseInterPro:NADH_PPase-like_NInterPro:NUDIX_hydrolase-like_dom_sf
InterPro:NUDIX_hydrolase_CSInterPro:NUDIX_hydrolase_domInterPro:OxRdtase_FAD-bd_domInterPro:OxRdtase_FAD/NAD-bdPFAM:PF00069PFAM:PF00175
PFAM:PF00293PFAM:PF00970PFAM:PF02230PFAM:PF09296PFAM:PF09297InterPro:PLipase/COase/thioEstase
PRINTS:PR00406ScanProsite:PS00107ScanProsite:PS00108ScanProsite:PS00893PFscan:PS50011PFscan:PS51384
PFscan:PS51462PANTHER:PTHR27002PANTHER:PTHR27002:SF75MetaCyc:PWY-5381InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
InterPro:Riboflavin_synthase-like_b-brlSMART:SM00220SUPFAM:SSF52343SUPFAM:SSF53474SUPFAM:SSF55811SUPFAM:SSF56112
SUPFAM:SSF63380InterPro:Ser/Thr_kinase_ASTMHMM:TMhelixUniParc:UPI0004EE9978InterPro:Znr_NADH_PPaseSEG:seg
Description
BnaA03g07880D
Coordinates
chrLK031856:-:1314051..1325641
Molecular Weight (calculated)
154935.0 Da
IEP (calculated)
8.670
GRAVY (calculated)
-0.159
Length
1405 amino acids
Sequence
(BLAST)
0001: MEDKKANIIA TLTILSLLLV IIAARVYLKL SKPFYLLAGV DISLILAVFC FLVIRSRYNR ERKNLESRYI SEGRELRIEY SFLRKVAGVP TKFKLEDLEE
0101: ATDGFRVQIG KGGSGSVFKG VLKDGSQVAV KRIEGEEKGE REFRSEVAAI ASVQHKNLVR LYGYSSANRY RFLVYEYIPN SSLDVWIFPG KRRLGGCLTW
0201: DQRYQVAIDV AKALSYLHND CRSKILHLDV KPENILLDED YRAVVTDFGL SKLVARDESR VVTEIRGTCG YLAPEWLLEH GISEKSDVYS YGIVLLEMIG
0301: GRRSITRVEN KRTKKKKLEY FPRIVNQKMR ERRVMEIVDQ RLIEAKEVGD EGQVMKLTLP SYSLRVLLLH SIACHPTMSL SGAAAVGSSR NLRKAVEFGK
0401: THVVRPKGKN QATIVWLHGL GDNGSSWSQI LETLPLPNIK WICPTAPSQP ISLFGGFPST AWFDVVDLTE NGPDDVEGLD VAAAHVANLL ANEPADIKLG
0501: VGGFSMGAGT SLYSATCFAL GKYGNGNPYP INLSAVIGLS GWLPCAKTLT GKLEEEQIKN RAASLPILVC HGKGDDVVPF KFGEKSSQAL LSHGFKKTTF
0601: KAYGALGHYT IPQETEDVCA WLTSTLGLEE MLALFLSSSS SYLTLSRSVT LHLSRRTTLS SLTMSTNLRT HAYAGNPLKS KTPKSTDTFS PSSAFESLKV
0701: LIPLIPNHPA PSPDFKVLPF SKGRPLVFSS GGGDASTTTP IWHLGWISLS DCKGMLASRG VDMDEDSLVY LGPKVEEDLV CWAVDVSEEG DGVVSGLESR
0801: KLCFVELRTL MVAADWVDQR AMDELAIAGH ARALLEWHNV SRFCGSCGGA NVPKEAGRRK QCSNKACGKR VYPRVDPVVI MLVIDRENDR ALLSRQSRYV
0901: PRMWSCLAGF IEAGESLEEA VRRETWEETG IEVGDVVYHS SQPWPVGPSS MPCQLMLGFF AFAKTLDINV DKEELEDAQW HSREDVKKAL AFAEYRKAQR
1001: TAASKIEQIC KGVEKSKSLT TDFNVESGEL APMFIPGPFA IAHHLISTSG LSHSQGSKPL PLRYYLCYSP PRSEPTMATS FFRRLARSAP IAAFPAALRS
1101: QIKSGHGTFR FSAGAIAALS GGFSCYYLTS GNNLAYLDQA KEETGLKTAL NPDKWLEFKL QDTATVSHNT KLFRFSFDPS ANLGLHVASC LLTRAPLGYN
1201: AEGKTKYVVR PYTPISDPEA KGYFDLLIKV YPDGKMSQHF ASLKPGDVLE VKGPIEKFKY SPNMKKHIGM IAGGSGITPM LQVIDTIVKN PEDNTKITLL
1301: YANVSPDDIL LKQKLDSLQA NHPNLKVFYT VDNPTKNWKG GVGYVSKDMA LKGLPLPADD TLILVCGPPG MMEHVSGGKA PDWSQGEVKG ILKELGFTEQ
1401: MVFKF
Best Arabidopsis Sequence Match ( AT5G20070.1 )
(BLAST)
001: MLALFLSSSS YPTLSFLSRS VTLNLARTTT LSALTMSMNL KTHAFAGNPL KSKTPKSTDP FSPTSAFESL KTLIPVIPNH STPSPDFKVL PFSKGRPLVF
101: SSGGDANTTP IWHLGWVSLA DCKVLLASCG VDLNEDSLVY LGPKLEEDLV YWAVDLAEDG FVSELGGRKL CFVELRTLMV AADWADQRAM DELAIAGNAR
201: ALLEWHNVSQ FCGSCGSKTF PKEAGRRKQC SDETCRKRVY PRVDPVVIML VIDRENDRAL LSRQSRYVPR MWSCLAGFIE PGESLEEAVR RETWEETGIE
301: VGDVVYHSSQ PWPVGPSSMP CQLMLGFFAF AKTLDINVDK EELEDAQWHS REEVKKALAV AEYRKAQRTA AAKVEQICKG VERSQSLSTD FNLESGELAP
401: MFIPGPFAIA HHLISAWVNQ APDDVHSKQQ AGVSLSSL
Arabidopsis Description
NUDT19Nudix hydrolase 19, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94A82]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.