CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46464	Canola	plasma membrane	96.15	84.42
CDY03159	Canola	plasma membrane	86.38	75.03
CDY24320	Canola	plasma membrane	86.93	74.97
AT1G34300.1	Thale cress	plasma membrane	82.26	72.14
CDX90728	Canola	plasma membrane	62.17	58.32
GSMUA_Achr10P...	Banana	plasma membrane	52.54	55.28
VIT_18s0086g00200.t01	Wine grape	cytosol	46.77	54.93
KRG91776	Soybean	plasma membrane	61.62	54.63
VIT_18s0086g00210.t01	Wine grape	plasma membrane	63.41	54.3
Solyc11g013880.1.1	Tomato	plasma membrane	60.94	52.93
PGSC0003DMT400077643	Potato	plasma membrane	60.66	52.69
TraesCS4A01G353300.1	Wheat	plasma membrane	61.07	51.33
HORVU5Hr1G118460.1	Barley	plasma membrane	60.94	51.27
Os03t0838100-01	Rice	plasma membrane	60.39	51.17
TraesCS5D01G519800.1	Wheat	plasma membrane	60.66	51.16
TraesCS5B01G520600.1	Wheat	plasma membrane	60.8	51.16
Zm00001d034781_P001	Maize	endoplasmic reticulum	58.73	50.12
OQU90662	Sorghum	plasma membrane	58.46	49.88
HORVU5Hr1G118510.1	Barley	endoplasmic reticulum, extracellular, vacuole	29.02	48.28
TraesCS5B01G520400.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	29.16	48.18
TraesCS4A01G353100.1	Wheat	extracellular	27.92	47.76
TraesCS5D01G519600.1	Wheat	cytosol	28.61	44.54
HORVU2Hr1G020630.1	Barley	cytosol, plastid	21.6	44.1
HORVU2Hr1G106300.1	Barley	extracellular	21.46	43.7
CDX80409	Canola	plasma membrane	35.76	30.52
CDX88071	Canola	plasma membrane	36.86	30.45
CDY42356	Canola	plasma membrane	17.61	28.7
CDX72354	Canola	plasma membrane	31.77	28.07
CDY13481	Canola	plasma membrane	31.64	27.98
CDX75235	Canola	endoplasmic reticulum, plasma membrane	30.95	27.78
CDX70909	Canola	plasma membrane	16.51	27.27
CDY23321	Canola	plasma membrane	30.81	27.12
CDX80408	Canola	cytosol	21.87	27.04
CDY39882	Canola	plasma membrane	27.79	24.37
CDX95197	Canola	plasma membrane	28.61	24.13
CDX68834	Canola	plasma membrane	28.2	20.88
CDY45109	Canola	plasma membrane	16.51	16.76
CDX88861	Canola	endoplasmic reticulum	16.23	8.4
CDX70911	Canola	mitochondrion	0.0	0.0

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:18.4.1.24.2	Gene3D:2.90.10.10	Gene3D:3.30.200.20	GO:A0A078DR40	InterPro:Bulb-type_lectin_dom	InterPro:Bulb-type_lectin_dom_sf
EnsemblPlants:CDX91781	ProteinID:CDX91781	ProteinID:CDX91781.1	GO:GO:0000003	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0008150	GO:GO:0008152	GO:GO:0009856	GO:GO:0009875
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0048544	EnsemblPlantsGene:GSBRNA2T00153355001
InterPro:IPR000719	InterPro:IPR001480	InterPro:IPR036426	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF00954
PFAM:PF01453	PIRSF:PIRSF000641	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50927
PANTHER:PTHR27002	PANTHER:PTHR27002:SF52	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00108	SMART:SM00220
InterPro:SRK-like_kinase	SUPFAM:SSF51110	SUPFAM:SSF56112	InterPro:S_locus_glycoprot_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI0004EE7E4E	SEG:seg	:	:	:

Description

BnaC08g07000D

Coordinates

chrLK031869:-:1337319..1339502

Molecular Weight (calculated)

79919.4 Da

IEP (calculated)

8.387

GRAVY (calculated)

-0.198

Length

727 amino acids

Sequence
(BLAST)

001: MAKSPYPNLL LLLLLRFPFS SSTIPLGSVL YASGSNQSWS SPNFTFSVSF LPSSSPNSFL AAVFFAGNIP IWSAGTVDSR GSLRLSSSGS LRLTNGSNAT
101: VWDSGTDGLG VVLATIEDSG NLRLLDNQSN PVWSSFDHPT DTIVQLQNFT AGKVLRSGNY SFQLERRGNL TLKWNNSTTY WSQGLNSSFS SNFSSPSLAL
201: QTNGVVLMFD STLSGGTETI YSDDYGEGSN TFRFLKLDDD GNLRIYSSAS RNSGPVSPHW SAVANQCLVY GYCGNFGICS YNDTTPVCLC PSRNFGLVDV
301: NDRRKGCKRK VELNDCSGNA TMLDLGNTRL VTDSSDPNSE VFFAGNSPCR SNCLVSTTCL ASVSLSDGSG NCWQKQRGSF FTGYQSSSVP STSYVKVCGP
401: VLPNQPLVGT KGDGNNSKVY LWIVAVAVVG GLLGLAVVEV GLWWCCCRNN PKFGTLSSHY TLLEYASGAP VQFSYRELQR CTKSFKEKLG AGGFGTVYRG
501: VLSNKTVVAV KQLEGIEQGE KQFRMEVATI SSTHHLNLVR LIGFCSEGRH RLLVYEFMRN GSLDSFLFTT DSGKLLTWEY RFNIALGTAK GITYLHEECR
601: DCIVHCDIKP ENILVDDNYT AKVSDFGLAK LLNPKDNRHK NMSSVRGTRG YLAPEWLANL PITSKSDVYS YGMVLLEIVS GKRNFDVSEK TNHKKFSIWA
701: YEEFEKSNTR PFLTNVCEKI KRLIWNK

Best Arabidopsis Sequence Match ( AT1G34300.1 )
(BLAST)

001: MAVKTPFLKL LPLLLLLLHF PFSFSTIPLG SVIYASGSNQ NWPSPNSTFS VSFVPSPSPN SFLAAVSFAG SVPIWSAGTV DSRGSLRLHT SGSLRLTNGS
101: GTTVWDSKTD RLGVTSGSIE DTGEFILLNN RSVPVWSSFD NPTDTIVQSQ NFTAGKILRS GLYSFQLERS GNLTLRWNTS AIYWNHGLNS SFSSNLSSPR
201: LSLQTNGVVS IFESNLLGGA EIVYSGDYGD SNTFRFLKLD DDGNLRIYSS ASRNSGPVNA HWSAVDQCLV YGYCGNFGIC SYNDTNPICS CPSRNFDFVD
301: VNDRRKGCKR KVELSDCSGN TTMLDLVHTR LFTYEDDPNS ESFFAGSSPC RANCLSSVLC LASVSMSDGS GNCWQKHPGS FFTGYQWPSV PSTSYVKVCG
401: PVVANTLERA TKGDDNNSKV HLWIVAVAVI AGLLGLVAVE IGLWWCCCRK NPRFGTLSSH YTLLEYASGA PVQFTYKELQ RCTKSFKEKL GAGGFGTVYR
501: GVLTNRTVVA VKQLEGIEQG EKQFRMEVAT ISSTHHLNLV RLIGFCSQGR HRLLVYEFMR NGSLDNFLFT TDSAKFLTWE YRFNIALGTA KGITYLHEEC
601: RDCIVHCDIK PENILVDDNF AAKVSDFGLA KLLNPKDNRY NMSSVRGTRG YLAPEWLANL PITSKSDVYS YGMVLLELVS GKRNFDVSEK TNHKKFSIWA
701: YEEFEKGNTK AILDTRLSED QTVDMEQVMR MVKTSFWCIQ EQPLQRPTMG KVVQMLEGIT EIKNPLCPKT ISEVSFSGNS MSTSHASMFV ASGPTRSSSF
801: SATRSFQTMG ITSSGPASTR ISEGSMLGS

Arabidopsis Description

G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Source:UniProtKB/Swiss-Prot;Acc:Q9XID3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.