Factsheet for HORVU2Hr1G020630.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G001280.1
HORVU2Hr1G016740.4
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU4Hr1G026290.3
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G044710.4

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G34300.1	HORVU0Hr1G001280.1	AT2G41100.1	17360592
AT1G34300.1	HORVU2Hr1G016740.4	AT2G41100.1	17360592
AT1G34300.1	HORVU3Hr1G038010.1	AT2G41100.1	17360592
AT1G34300.1	HORVU3Hr1G079210.4	AT2G41100.1	17360592
AT1G34300.1	HORVU4Hr1G026290.3	AT2G41100.1	17360592
AT1G34300.1	HORVU5Hr1G014060.1	AT2G41100.1	17360592
AT1G34300.1	HORVU5Hr1G014070.2	AT2G41100.1	17360592
AT1G34300.1	HORVU5Hr1G044710.4	AT2G41100.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G106300.1	Barley	extracellular	86.52	86.27
HORVU5Hr1G118510.1	Barley	endoplasmic reticulum, extracellular, vacuole	66.85	54.46
HORVU5Hr1G118460.1	Barley	plasma membrane	84.83	34.95
TraesCS5D01G519800.1	Wheat	plasma membrane	82.02	33.87
TraesCS5B01G520600.1	Wheat	plasma membrane	81.74	33.68
TraesCS4A01G353300.1	Wheat	plasma membrane	81.74	33.64
OQU90662	Sorghum	plasma membrane	68.26	28.52
Zm00001d034781_P001	Maize	endoplasmic reticulum	67.13	28.05
GSMUA_Achr10P...	Banana	plasma membrane	47.75	24.6
CDX91781	Canola	extracellular, plasma membrane, vacuole	44.1	21.6
Bra028049.1-P	Field mustard	plasma membrane	44.66	19.16
CDY24320	Canola	plasma membrane	45.22	19.1
CDY03159	Canola	plasma membrane	44.66	19.0
Bra036747.1-P	Field mustard	plasma membrane	43.82	18.84
CDY46464	Canola	plasma membrane	43.82	18.84
KRG91776	Soybean	plasma membrane	42.7	18.54
VIT_18s0086g00210.t01	Wine grape	plasma membrane	43.54	18.26
PGSC0003DMT400077643	Potato	plasma membrane	42.13	17.92
AT1G34300.1	Thale cress	plasma membrane	41.29	17.73
KRH08565	Soybean	plasma membrane	41.57	17.72
KRH70212	Soybean	plasma membrane	41.57	17.7
Solyc11g013880.1.1	Tomato	plasma membrane	41.57	17.68
CDX90728	Canola	plasma membrane	36.24	16.65
Bra000686.1-P	Field mustard	plasma membrane	35.67	16.41
HORVU6Hr1G092620.1	Barley	plasma membrane	21.91	9.75
HORVU1Hr1G005720.5	Barley	cytosol, plasma membrane	20.79	9.61
HORVU2Hr1G066280.1	Barley	plasma membrane	22.19	9.5
VIT_18s0086g00200.t01	Wine grape	cytosol	16.29	9.37
HORVU2Hr1G124190.2	Barley	endoplasmic reticulum, plasma membrane	20.79	9.3
HORVU2Hr1G124250.1	Barley	endoplasmic reticulum, plasma membrane	20.79	9.3
HORVU5Hr1G000910.1	Barley	endoplasmic reticulum, plasma membrane	20.79	9.26
HORVU7Hr1G089080.11	Barley	plasma membrane	21.35	9.07
HORVU2Hr1G100250.10	Barley	plasma membrane	20.79	8.89
HORVU7Hr1G047150.8	Barley	mitochondrion, plasma membrane	19.66	8.06
HORVU6Hr1G080460.1	Barley	endoplasmic reticulum, plasma membrane	20.22	8.04
HORVU5Hr1G001800.2	Barley	cytosol	14.89	7.69
HORVU5Hr1G068070.1	Barley	plasma membrane	19.66	7.68
HORVU5Hr1G000240.2	Barley	plasma membrane	20.22	7.54
HORVU3Hr1G012080.10	Barley	plastid	8.71	6.13
HORVU3Hr1G012050.1	Barley	plasma membrane	7.02	6.05
HORVU3Hr1G002220.1	Barley	plasma membrane	8.43	4.77
HORVU3Hr1G012100.2	Barley	plasma membrane	6.74	3.74
HORVU6Hr1G092730.1	Barley	plasma membrane	1.4	2.07
HORVU7Hr1G020720.3	Barley	plasma membrane	2.25	1.74
HORVU2Hr1G098980.1	Barley	cytosol, mitochondrion	0.56	1.65
HORVU3Hr1G002210.3	Barley	plasma membrane	2.25	1.65
HORVU3Hr1G002230.1	Barley	plasma membrane	0.56	1.24
HORVU3Hr1G002240.1	Barley	cytosol	0.84	1.22

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:2.90.10.10
MapMan:35.1	UniProt:A0A287HAH1	InterPro:Bulb-type_lectin_dom	InterPro:Bulb-type_lectin_dom_sf	GO:GO:0000003	GO:GO:0007154
GO:GO:0008150	GO:GO:0009856	GO:GO:0009875	GO:GO:0009987	GO:GO:0048544	EnsemblPlantsGene:HORVU2Hr1G020630
EnsemblPlants:HORVU2Hr1G020630.1	InterPro:IPR001480	InterPro:IPR036426	PFAM:PF00954	PFAM:PF01453	PFscan:PS50927
PANTHER:PTHR27002	PANTHER:PTHR27002:SF52	SMART:SM00108	SUPFAM:SSF51110	InterPro:S_locus_glycoprot_dom	UniParc:UPI000B468A5E
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:57188973..57190208

Molecular Weight (calculated)

36244.9 Da

IEP (calculated)

4.547

GRAVY (calculated)

-0.100

Length

356 amino acids

Sequence
(BLAST)

001: QPSSLPPVSY THLTLPTRPY GVDLXPFPSH GKDMPLGSTL TPGGNSAAWA SPNSTFSLAF APSPTSPSLF VASVTYAGGI SIWSAGAGAP VDSGGSLLLS
101: STGDLQLVNG SGAVLWSSGT AGRGISAAAL QESGSLVLKN STGGAVWQSF DHPTDTVVMS QNFASGVNLT SGSYVFAVDR ATGNLTLRWA NAGSATVTYF
201: NKGYNSTFTA NRMLSSPTLT MQTNGIVSLT DGTLNAPVVV AYSSNYGESG NMLRFVRLDS DGNFRAYNAG RGSGTATEQW SAVADQCEVF GYCGNMGVCG
301: YNGTSPVCGC PSHQQTEQRQ QGATVSDAVA EEAPGGGVGG ADPPIPGPVE DRGCFE

Best Arabidopsis Sequence Match ( AT1G34300.1 )
(BLAST)

001: MAVKTPFLKL LPLLLLLLHF PFSFSTIPLG SVIYASGSNQ NWPSPNSTFS VSFVPSPSPN SFLAAVSFAG SVPIWSAGTV DSRGSLRLHT SGSLRLTNGS
101: GTTVWDSKTD RLGVTSGSIE DTGEFILLNN RSVPVWSSFD NPTDTIVQSQ NFTAGKILRS GLYSFQLERS GNLTLRWNTS AIYWNHGLNS SFSSNLSSPR
201: LSLQTNGVVS IFESNLLGGA EIVYSGDYGD SNTFRFLKLD DDGNLRIYSS ASRNSGPVNA HWSAVDQCLV YGYCGNFGIC SYNDTNPICS CPSRNFDFVD
301: VNDRRKGCKR KVELSDCSGN TTMLDLVHTR LFTYEDDPNS ESFFAGSSPC RANCLSSVLC LASVSMSDGS GNCWQKHPGS FFTGYQWPSV PSTSYVKVCG
401: PVVANTLERA TKGDDNNSKV HLWIVAVAVI AGLLGLVAVE IGLWWCCCRK NPRFGTLSSH YTLLEYASGA PVQFTYKELQ RCTKSFKEKL GAGGFGTVYR
501: GVLTNRTVVA VKQLEGIEQG EKQFRMEVAT ISSTHHLNLV RLIGFCSQGR HRLLVYEFMR NGSLDNFLFT TDSAKFLTWE YRFNIALGTA KGITYLHEEC
601: RDCIVHCDIK PENILVDDNF AAKVSDFGLA KLLNPKDNRY NMSSVRGTRG YLAPEWLANL PITSKSDVYS YGMVLLELVS GKRNFDVSEK TNHKKFSIWA
701: YEEFEKGNTK AILDTRLSED QTVDMEQVMR MVKTSFWCIQ EQPLQRPTMG KVVQMLEGIT EIKNPLCPKT ISEVSFSGNS MSTSHASMFV ASGPTRSSSF
801: SATRSFQTMG ITSSGPASTR ISEGSMLGS

Arabidopsis Description

G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Source:UniProtKB/Swiss-Prot;Acc:Q9XID3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.