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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • plastid 1
  • extracellular 3
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:mitochondrion, plastid, secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
TargetP:mitochondrion
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU0Hr1G001280.1
HORVU2Hr1G016740.4
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU4Hr1G026290.3
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G044710.4

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G34300.1 HORVU0Hr1G001280.1 AT2G41100.1 17360592
AT1G34300.1 HORVU2Hr1G016740.4 AT2G41100.1 17360592
AT1G34300.1 HORVU3Hr1G038010.1 AT2G41100.1 17360592
AT1G34300.1 HORVU3Hr1G079210.4 AT2G41100.1 17360592
AT1G34300.1 HORVU4Hr1G026290.3 AT2G41100.1 17360592
AT1G34300.1 HORVU5Hr1G014060.1 AT2G41100.1 17360592
AT1G34300.1 HORVU5Hr1G014070.2 AT2G41100.1 17360592
AT1G34300.1 HORVU5Hr1G044710.4 AT2G41100.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU2Hr1G020630.1 Barley cytosol, plastid 86.27 86.52
HORVU5Hr1G118510.1 Barley endoplasmic reticulum, extracellular, vacuole 66.67 54.46
HORVU5Hr1G118460.1 Barley plasma membrane 85.15 35.19
TraesCS5D01G519800.1 Wheat plasma membrane 82.63 34.22
TraesCS4A01G353300.1 Wheat plasma membrane 82.63 34.1
TraesCS5B01G520600.1 Wheat plasma membrane 82.35 34.03
OQU90662 Sorghum plasma membrane 69.47 29.11
Zm00001d034781_P001 Maize endoplasmic reticulum 68.35 28.64
GSMUA_Achr10P... Banana plasma membrane 48.46 25.04
CDX91781 Canola extracellular, plasma membrane, vacuole 43.7 21.46
KRG91776 Soybean plasma membrane 43.7 19.02
Bra028049.1-P Field mustard plasma membrane 43.98 18.92
CDY24320 Canola plasma membrane 44.54 18.86
VIT_18s0086g00210.t01 Wine grape plasma membrane 44.82 18.85
CDY03159 Canola plasma membrane 43.98 18.76
CDY46464 Canola plasma membrane 43.42 18.72
Bra036747.1-P Field mustard plasma membrane 43.42 18.72
AT1G34300.1 Thale cress plasma membrane 40.9 17.61
KRH70212 Soybean plasma membrane 41.18 17.58
PGSC0003DMT400077643 Potato plasma membrane 41.18 17.56
KRH08565 Soybean plasma membrane 40.62 17.37
Solyc11g013880.1.1 Tomato plasma membrane 40.62 17.32
CDX90728 Canola plasma membrane 36.69 16.9
Bra000686.1-P Field mustard plasma membrane 35.85 16.54
VIT_18s0086g00200.t01 Wine grape cytosol 17.93 10.34
HORVU6Hr1G092620.1 Barley plasma membrane 21.29 9.5
HORVU2Hr1G124190.2 Barley endoplasmic reticulum, plasma membrane 21.01 9.42
HORVU2Hr1G124250.1 Barley endoplasmic reticulum, plasma membrane 21.01 9.42
HORVU5Hr1G000910.1 Barley endoplasmic reticulum, plasma membrane 20.73 9.26
HORVU1Hr1G005720.5 Barley cytosol, plasma membrane 19.89 9.22
HORVU2Hr1G066280.1 Barley plasma membrane 21.29 9.13
HORVU7Hr1G089080.11 Barley plasma membrane 20.73 8.83
HORVU2Hr1G100250.10 Barley plasma membrane 20.17 8.65
HORVU6Hr1G080460.1 Barley endoplasmic reticulum, plasma membrane 20.17 8.04
HORVU7Hr1G047150.8 Barley mitochondrion, plasma membrane 19.33 7.95
HORVU5Hr1G001800.2 Barley cytosol 15.13 7.84
HORVU5Hr1G068070.1 Barley plasma membrane 19.89 7.79
HORVU5Hr1G000240.2 Barley plasma membrane 20.17 7.54
HORVU3Hr1G012080.10 Barley plastid 7.28 5.14
HORVU3Hr1G012050.1 Barley plasma membrane 5.88 5.08
HORVU3Hr1G002220.1 Barley plasma membrane 7.28 4.13
HORVU3Hr1G012100.2 Barley plasma membrane 5.88 3.27
HORVU6Hr1G092730.1 Barley plasma membrane 1.4 2.07
HORVU7Hr1G020720.3 Barley plasma membrane 2.52 1.96
HORVU3Hr1G002210.3 Barley plasma membrane 2.52 1.86
HORVU2Hr1G098980.1 Barley cytosol, mitochondrion 0.56 1.65
HORVU3Hr1G002230.1 Barley plasma membrane 0.56 1.24
HORVU3Hr1G002240.1 Barley cytosol 0.84 1.22
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:2.90.10.10
MapMan:35.1UniProt:A0A287JBU5InterPro:Bulb-type_lectin_domInterPro:Bulb-type_lectin_dom_sfGO:GO:0000003GO:GO:0007154
GO:GO:0008150GO:GO:0009856GO:GO:0009875GO:GO:0009987GO:GO:0048544EnsemblPlantsGene:HORVU2Hr1G106300
EnsemblPlants:HORVU2Hr1G106300.1InterPro:IPR001480InterPro:IPR036426PFAM:PF00954PFAM:PF01453PANTHER:PTHR27002
PANTHER:PTHR27002:SF52SMART:SM00108SUPFAM:SSF51110InterPro:S_locus_glycoprot_domSignalP:SignalP-noTMUniParc:UPI000B47EB59
SEG:seg:::::
Description
No Description!
Coordinates
chrchr2H:+:709110130..709112683
Molecular Weight (calculated)
36984.2 Da
IEP (calculated)
5.663
GRAVY (calculated)
-0.082
Length
357 amino acids
Sequence
(BLAST)
001: MRPSRGDLGV LCRGFLLLLL PFPSHGKDMP LGSTLTPGGN SAAWASPNST FSLAFAPSPT SPSLFVASVT YAGGISIWSA GAGAPVDSGG SLLLSSXVVL
101: WSSGTAGRGV SAAALQESGI LVLKNSTGGA VWQSFDHPTD TVVMSQNFAS GMNLTSGSYV FTVDRATGNL TLRWANAGSA TVTYFNKDYN STFTANRTLS
201: SPTLTMQTND IVSLTDGTLN APVVVAYSSN YGESGDMLRF VRLDSDGNFR AYSAGRGSGT ATEQWSAVAD QCEVFGYCGN MGVCGYNGTS PVCGCPSHQQ
301: TEQRQQGATV SDAVAEEAPG GGARGLDPPI PGPVEDRGSF EKRNVFFHLK KNCGMIN
Best Arabidopsis Sequence Match ( AT1G34300.1 )
(BLAST)
001: MAVKTPFLKL LPLLLLLLHF PFSFSTIPLG SVIYASGSNQ NWPSPNSTFS VSFVPSPSPN SFLAAVSFAG SVPIWSAGTV DSRGSLRLHT SGSLRLTNGS
101: GTTVWDSKTD RLGVTSGSIE DTGEFILLNN RSVPVWSSFD NPTDTIVQSQ NFTAGKILRS GLYSFQLERS GNLTLRWNTS AIYWNHGLNS SFSSNLSSPR
201: LSLQTNGVVS IFESNLLGGA EIVYSGDYGD SNTFRFLKLD DDGNLRIYSS ASRNSGPVNA HWSAVDQCLV YGYCGNFGIC SYNDTNPICS CPSRNFDFVD
301: VNDRRKGCKR KVELSDCSGN TTMLDLVHTR LFTYEDDPNS ESFFAGSSPC RANCLSSVLC LASVSMSDGS GNCWQKHPGS FFTGYQWPSV PSTSYVKVCG
401: PVVANTLERA TKGDDNNSKV HLWIVAVAVI AGLLGLVAVE IGLWWCCCRK NPRFGTLSSH YTLLEYASGA PVQFTYKELQ RCTKSFKEKL GAGGFGTVYR
501: GVLTNRTVVA VKQLEGIEQG EKQFRMEVAT ISSTHHLNLV RLIGFCSQGR HRLLVYEFMR NGSLDNFLFT TDSAKFLTWE YRFNIALGTA KGITYLHEEC
601: RDCIVHCDIK PENILVDDNF AAKVSDFGLA KLLNPKDNRY NMSSVRGTRG YLAPEWLANL PITSKSDVYS YGMVLLELVS GKRNFDVSEK TNHKKFSIWA
701: YEEFEKGNTK AILDTRLSED QTVDMEQVMR MVKTSFWCIQ EQPLQRPTMG KVVQMLEGIT EIKNPLCPKT ISEVSFSGNS MSTSHASMFV ASGPTRSSSF
801: SATRSFQTMG ITSSGPASTR ISEGSMLGS
Arabidopsis Description
G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Source:UniProtKB/Swiss-Prot;Acc:Q9XID3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.