Factsheet for Solyc11g013880.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
plastid 1
cytosol 1
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g008950.2.1
Solyc10g077010.1.1
Solyc10g081170.1.1
Solyc11g072240.1.1
Solyc12g099990.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G34300.1	Solyc01g008950.2.1	AT2G41100.1	17360592
AT1G34300.1	Solyc10g077010.1.1	AT2G41100.1	17360592
AT1G34300.1	Solyc10g081170.1.1	AT2G41100.1	17360592
AT1G34300.1	Solyc11g072240.1.1	AT2G41100.1	17360592
AT1G34300.1	Solyc12g099990.1.1	AT2G41100.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400077643	Potato	plasma membrane	97.61	97.61
VIT_18s0086g00200.t01	Wine grape	cytosol	50.78	68.66
VIT_18s0086g00210.t01	Wine grape	plasma membrane	68.7	67.73
KRH08565	Soybean	plasma membrane	64.52	64.67
KRH70212	Soybean	plasma membrane	64.28	64.35
GSMUA_Achr10P...	Banana	plasma membrane	52.45	63.53
CDX91781	Canola	extracellular, plasma membrane, vacuole	52.93	60.94
Bra036747.1-P	Field mustard	plasma membrane	59.74	60.39
CDY46464	Canola	plasma membrane	59.74	60.39
Bra028049.1-P	Field mustard	plasma membrane	59.74	60.24
Os03t0838100-01	Rice	plasma membrane	61.05	59.56
CDY24320	Canola	plasma membrane	59.98	59.55
AT1G34300.1	Thale cress	plasma membrane	58.66	59.23
CDY03159	Canola	plasma membrane	59.02	59.02
OQU90662	Sorghum	plasma membrane	59.5	58.45
TraesCS5D01G519800.1	Wheat	plasma membrane	59.98	58.24
Zm00001d034781_P001	Maize	endoplasmic reticulum	59.14	58.1
TraesCS4A01G353300.1	Wheat	plasma membrane	59.98	58.03
TraesCS5B01G520600.1	Wheat	plasma membrane	59.86	57.99
HORVU5Hr1G118460.1	Barley	plasma membrane	59.62	57.75
CDX90728	Canola	plasma membrane	52.57	56.77
Bra000686.1-P	Field mustard	plasma membrane	51.85	56.07
Solyc07g055410.1.1	Tomato	cytosol	4.66	48.15
HORVU5Hr1G118510.1	Barley	endoplasmic reticulum, extracellular, vacuole	24.61	47.14
TraesCS4A01G353100.1	Wheat	extracellular	23.89	47.06
TraesCS5B01G520400.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	24.01	45.68
TraesCS5D01G519600.1	Wheat	cytosol	24.61	44.11
HORVU2Hr1G020630.1	Barley	cytosol, plastid	17.68	41.57
Solyc07g055670.1.1	Tomato	cytosol	11.59	40.93
HORVU2Hr1G106300.1	Barley	extracellular	17.32	40.62
Solyc07g055420.1.1	Tomato	cytosol	10.39	39.91
Solyc07g055580.1.1	Tomato	plasma membrane	12.9	36.73
Solyc07g055630.2.1	Tomato	cytosol	13.86	36.59
Solyc07g055650.1.1	Tomato	cytosol, plasma membrane, plastid	17.92	35.71
Solyc07g055430.1.1	Tomato	cytosol	5.02	34.71
Solyc03g007790.2.1	Tomato	plasma membrane	35.24	34.14
Solyc06g036470.1.1	Tomato	plasma membrane	33.21	33.66
Solyc07g055400.1.1	Tomato	cytosol	9.44	33.62
Solyc08g059730.1.1	Tomato	plasma membrane	31.54	32.67
Solyc06g008890.2.1	Tomato	plasma membrane	17.2	29.63
Solyc04g015460.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	28.43	27.39
Solyc07g055570.1.1	Tomato	cytosol	5.85	26.92
Solyc02g072070.2.1	Tomato	plasma membrane	24.85	26.2
Solyc07g055640.1.1	Tomato	cytosol	17.08	17.42

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:18.4.1.24.2	Gene3D:2.90.10.10	Gene3D:3.30.200.20	InterPro:Bulb-type_lectin_dom	InterPro:Bulb-type_lectin_dom_sf	GO:GO:0000003
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0008150	GO:GO:0008152	GO:GO:0009856	GO:GO:0009875	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0048544
InterPro:IPR000719	InterPro:IPR001480	InterPro:IPR036426	UniProt:K4D6J2	InterPro:Kinase-like_dom_sf	PFAM:PF00069
PFAM:PF00954	PFAM:PF01453	PIRSF:PIRSF000641	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS50927	PANTHER:PTHR27002	PANTHER:PTHR27002:SF52	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00108
SMART:SM00220	InterPro:SRK-like_kinase	SUPFAM:SSF51110	SUPFAM:SSF56112	InterPro:S_locus_glycoprot_dom	InterPro:Ser/Thr_kinase_AS
SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc11g013880.1	EnsemblPlants:Solyc11g013880.1.1	UniParc:UPI000276A744	SEG:seg	:

Description

Serine/threonine-protein kinase [Source:UniProtKB/TrEMBL;Acc:K4D6J2]

Coordinates

chr11:+:7300896..7303409

Molecular Weight (calculated)

91381.9 Da

IEP (calculated)

6.010

GRAVY (calculated)

-0.155

Length

837 amino acids

Sequence
(BLAST)

001: MKLLFILFTI LIITIEAVDI LPNSTLSASN PNSKWSSPNN TFSFSFLQLD PTNQSSYFAA ISYNNIPIWK AGADTVNGGA VDISGELRFL SNGDLQLISG
101: SSGSVVWSSG TVNRGVSTAT LDDNGNFRLK NGTVSNIWSA FDNPTDTIVP GQNFTNNHVL RSGLYSFSLM NNGNLSLLWN GSIVYYNSGL NSSVNVNLSS
201: PSLGMQPIGI LSLSDPSLSN PLNVVYSSDY ADEGNILRFF KLDDDGNLRI YSSTQGSGTQ NVRWAALTDQ CQVFGYCGNF GVCSYNETDP TCGCPSQNFE
301: LTDPNDSRKG CRRIVELSNC PSNATMLQLD NAKFLTYPPE LSEQIFSAGI SACRFNCLVN GACVASTSLA DGTGMCYIKQ PNFVSGYQAP TLPSTSFLKI
401: CGPAMPNPTA NSEPVPEKNG GRVPGWVVAV VVVASVLGLI LLEGGLWYWC FRNSSKFASL SSQYALLEYA SGAPVQFTFN QLQRATKGFK EKLGAGGFGA
501: VYRAVLANRS VAAVKQLEGI EQGEKQFRME VATISSTHHL NLVRLIGFCS EGRHRLLVYE FMKNGSLDKF LFSEDHSSGR LLNWEQRFNI ALGTARGITY
601: LHEECRDCIV HCDIKPENIL LDENYIAKVS DFGLAKLINP KDHRHRTLTS HVRGTRGYLA PEWLANLPIT SKSDVYSYGM VLLEIVSGKR NFEVSEETNQ
701: KKCSLWAYEE FERGNMEAIM DKKLSNQEMD MEQVIRAIQV SFWCIQEQPS QRPTMGKVVQ MLEGVFEIDR PPAPKATEGS FAGTSLNASS TSGLSTFAAS
801: APAPSSSSSF QTAGFQSSAS AMNVDRQSSS LLHSEIK

Best Arabidopsis Sequence Match ( AT1G34300.1 )
(BLAST)

001: MAVKTPFLKL LPLLLLLLHF PFSFSTIPLG SVIYASGSNQ NWPSPNSTFS VSFVPSPSPN SFLAAVSFAG SVPIWSAGTV DSRGSLRLHT SGSLRLTNGS
101: GTTVWDSKTD RLGVTSGSIE DTGEFILLNN RSVPVWSSFD NPTDTIVQSQ NFTAGKILRS GLYSFQLERS GNLTLRWNTS AIYWNHGLNS SFSSNLSSPR
201: LSLQTNGVVS IFESNLLGGA EIVYSGDYGD SNTFRFLKLD DDGNLRIYSS ASRNSGPVNA HWSAVDQCLV YGYCGNFGIC SYNDTNPICS CPSRNFDFVD
301: VNDRRKGCKR KVELSDCSGN TTMLDLVHTR LFTYEDDPNS ESFFAGSSPC RANCLSSVLC LASVSMSDGS GNCWQKHPGS FFTGYQWPSV PSTSYVKVCG
401: PVVANTLERA TKGDDNNSKV HLWIVAVAVI AGLLGLVAVE IGLWWCCCRK NPRFGTLSSH YTLLEYASGA PVQFTYKELQ RCTKSFKEKL GAGGFGTVYR
501: GVLTNRTVVA VKQLEGIEQG EKQFRMEVAT ISSTHHLNLV RLIGFCSQGR HRLLVYEFMR NGSLDNFLFT TDSAKFLTWE YRFNIALGTA KGITYLHEEC
601: RDCIVHCDIK PENILVDDNF AAKVSDFGLA KLLNPKDNRY NMSSVRGTRG YLAPEWLANL PITSKSDVYS YGMVLLELVS GKRNFDVSEK TNHKKFSIWA
701: YEEFEKGNTK AILDTRLSED QTVDMEQVMR MVKTSFWCIQ EQPLQRPTMG KVVQMLEGIT EIKNPLCPKT ISEVSFSGNS MSTSHASMFV ASGPTRSSSF
801: SATRSFQTMG ITSSGPASTR ISEGSMLGS

Arabidopsis Description

G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Source:UniProtKB/Swiss-Prot;Acc:Q9XID3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.