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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 3
  • plasma membrane 4
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G308700.1
TraesCS1A01G308800.1
TraesCS1B01G319300.1
TraesCS1D01G308000.1
TraesCS2B01G113800.2
TraesCS3A01G184500.1
TraesCS3A01G191900.1
TraesCS3A01G335000.1
TraesCS3B01G219900.1
TraesCS3B01G365900.1
TraesCS3D01G188600.1
TraesCS3D01G194500.2
TraesCS3D01G328300.1
TraesCS4B01G131100.1
TraesCS4D01G126100.1
TraesCS5A01G057100.1
TraesCS5A01G057200.1
TraesCS5A01G139700.1
TraesCS5B01G059900.1
TraesCS5B01G137100.1
TraesCS5D01G068000.1
TraesCS5D01G068100.1
TraesCS5D01G153400.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G34300.1 TraesCS1A01G308700.1 AT2G41100.1 17360592
AT1G34300.1 TraesCS1A01G308800.1 AT2G41100.1 17360592
AT1G34300.1 TraesCS1B01G319300.1 AT2G41100.1 17360592
AT1G34300.1 TraesCS1D01G308000.1 AT2G41100.1 17360592
AT1G34300.1 TraesCS2B01G113800.2 AT2G41100.1 17360592
AT1G34300.1 TraesCS3A01G184500.1 AT2G41100.1 17360592
AT1G34300.1 TraesCS3A01G191900.1 AT2G41100.1 17360592
AT1G34300.1 TraesCS3A01G335000.1 AT2G41100.1 17360592
AT1G34300.1 TraesCS3B01G219900.1 AT2G41100.1 17360592
AT1G34300.1 TraesCS3B01G365900.1 AT2G41100.1 17360592
AT1G34300.1 TraesCS3D01G188600.1 AT2G41100.1 17360592
AT1G34300.1 TraesCS3D01G194500.2 AT2G41100.1 17360592
AT1G34300.1 TraesCS3D01G328300.1 AT2G41100.1 17360592
AT1G34300.1 TraesCS4B01G131100.1 AT2G41100.1 17360592
AT1G34300.1 TraesCS4D01G126100.1 AT2G41100.1 17360592
AT1G34300.1 TraesCS5A01G057100.1 AT2G41100.1 17360592
AT1G34300.1 TraesCS5A01G057200.1 AT2G41100.1 17360592
AT1G34300.1 TraesCS5A01G139700.1 AT2G41100.1 17360592
AT1G34300.1 TraesCS5B01G059900.1 AT2G41100.1 17360592
AT1G34300.1 TraesCS5B01G137100.1 AT2G41100.1 17360592
AT1G34300.1 TraesCS5D01G068000.1 AT2G41100.1 17360592
AT1G34300.1 TraesCS5D01G068100.1 AT2G41100.1 17360592
AT1G34300.1 TraesCS5D01G153400.1 AT2G41100.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4A01G353100.1 Wheat extracellular 85.45 88.47
HORVU5Hr1G118510.1 Barley endoplasmic reticulum, extracellular, vacuole 87.05 87.64
TraesCS5D01G519600.1 Wheat cytosol 90.23 85.01
TraesCS5B01G520600.1 Wheat plasma membrane 80.0 40.74
Os03t0838100-01 Rice plasma membrane 72.5 37.18
GSMUA_Achr10P... Banana plasma membrane 56.14 35.75
CDX91781 Canola extracellular, plasma membrane, vacuole 48.18 29.16
KRG91776 Soybean plasma membrane 48.41 25.98
Bra036747.1-P Field mustard plasma membrane 48.64 25.85
VIT_18s0086g00210.t01 Wine grape plasma membrane 49.77 25.8
CDY46464 Canola plasma membrane 48.41 25.72
CDY03159 Canola plasma membrane 47.5 24.97
Bra028049.1-P Field mustard plasma membrane 46.82 24.82
CDY24320 Canola plasma membrane 47.5 24.79
PGSC0003DMT400077643 Potato plasma membrane 46.36 24.37
KRH70212 Soybean plasma membrane 46.14 24.28
AT1G34300.1 Thale cress plasma membrane 45.68 24.25
Solyc11g013880.1.1 Tomato plasma membrane 45.68 24.01
CDX90728 Canola plasma membrane 42.05 23.87
KRH08565 Soybean plasma membrane 45.0 23.71
Bra000686.1-P Field mustard plasma membrane 41.59 23.64
VIT_18s0086g00200.t01 Wine grape cytosol 25.91 18.42
TraesCS2B01G290100.3 Wheat plasma membrane 24.32 12.75
TraesCS6B01G444600.1 Wheat plasma membrane 21.14 11.29
TraesCS2B01G449900.1 Wheat extracellular, plasma membrane 21.14 11.12
TraesCS6B01G445200.1 Wheat cytosol 14.77 10.09
TraesCS3B01G107000.1 Wheat plasma membrane 19.55 9.94
TraesCS6B01G361900.1 Wheat plasma membrane 19.77 9.74
TraesCS5B01G236200.1 Wheat plasma membrane 20.45 9.39
TraesCS5B01G000800.1 Wheat plasma membrane 20.45 9.22
TraesCS3B01G075300.1 Wheat plasma membrane 7.27 7.71
TraesCS5B01G468100.1 Wheat nucleus 9.32 7.03
TraesCS7B01G196400.2 Wheat cytosol, endoplasmic reticulum, plasma membrane, plastid 9.77 6.64
TraesCS6B01G444200.1 Wheat cytosol 6.82 5.8
TraesCS3B01G077000.1 Wheat plasma membrane 7.95 5.47
TraesCS3B01G076900.1 Wheat plasma membrane 7.95 5.45
TraesCS3B01G079400.1 Wheat cytosol, plasma membrane, plastid 3.86 3.31
TraesCS7B01G273000.1 Wheat plastid 1.36 1.49
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:2.90.10.10
MapMan:35.1InterPro:Bulb-type_lectin_domInterPro:Bulb-type_lectin_dom_sfGO:GO:0000003GO:GO:0007154GO:GO:0008150
GO:GO:0009856GO:GO:0009875GO:GO:0009987GO:GO:0048544InterPro:IPR001480InterPro:IPR003609
InterPro:IPR036426PFAM:PF00954PFAM:PF01453PFAM:PF08276PFscan:PS50927PANTHER:PTHR27002
PANTHER:PTHR27002:SF52InterPro:Pan_appSMART:SM00108SUPFAM:SSF51110InterPro:S_locus_glycoprot_domSignalP:SignalP-noTM
EnsemblPlantsGene:TraesCS5B01G520400EnsemblPlants:TraesCS5B01G520400.1SEG:seg:::
Description
No Description!
Coordinates
chr5B:+:682696361..682697683
Molecular Weight (calculated)
45749.7 Da
IEP (calculated)
7.302
GRAVY (calculated)
0.045
Length
440 amino acids
Sequence
(BLAST)
001: MRPLRGDPGA GADLAILCCC FLLLSFLSHG ADMPLGSSLS PAANSTSWSS PNSTYSLRFV PSPTSPSLFV AAVTYAGGVP VWSAGAGAAV DSRGSLRLSS
101: SGDLHLVNGS GAVLWSSGTA GRGVAAASLH ESGNLVLNNS RGRVVWQSFH HPTDTVVMSQ SFTSGMNLTS GPYVFAVDRA TGNLTLNWAS AGAAPVTYLS
201: KGYNYTFTAN TTLSSPKLTM QTNGIVSITD GSLDSPIIVA YSSNYGESGD MLRFLRLDSD GNFRAYSAAH GSGTATEQWS AVADQCQVFG YCGNMGMCSY
301: NRTSPVCGCP SRNFELVDAS NPRSGCKRKT ELQNCPGNST MLQIDNTQFL TYPLEIAIEQ FYIGITACRL NCLAGSSCVG ATALSDGSGL CWLKVSNFVS
401: AYQSASLPST SFVKVCFPGV PNPPVSATNA SSPGTSGLHG
Best Arabidopsis Sequence Match ( AT1G34300.1 )
(BLAST)
001: MAVKTPFLKL LPLLLLLLHF PFSFSTIPLG SVIYASGSNQ NWPSPNSTFS VSFVPSPSPN SFLAAVSFAG SVPIWSAGTV DSRGSLRLHT SGSLRLTNGS
101: GTTVWDSKTD RLGVTSGSIE DTGEFILLNN RSVPVWSSFD NPTDTIVQSQ NFTAGKILRS GLYSFQLERS GNLTLRWNTS AIYWNHGLNS SFSSNLSSPR
201: LSLQTNGVVS IFESNLLGGA EIVYSGDYGD SNTFRFLKLD DDGNLRIYSS ASRNSGPVNA HWSAVDQCLV YGYCGNFGIC SYNDTNPICS CPSRNFDFVD
301: VNDRRKGCKR KVELSDCSGN TTMLDLVHTR LFTYEDDPNS ESFFAGSSPC RANCLSSVLC LASVSMSDGS GNCWQKHPGS FFTGYQWPSV PSTSYVKVCG
401: PVVANTLERA TKGDDNNSKV HLWIVAVAVI AGLLGLVAVE IGLWWCCCRK NPRFGTLSSH YTLLEYASGA PVQFTYKELQ RCTKSFKEKL GAGGFGTVYR
501: GVLTNRTVVA VKQLEGIEQG EKQFRMEVAT ISSTHHLNLV RLIGFCSQGR HRLLVYEFMR NGSLDNFLFT TDSAKFLTWE YRFNIALGTA KGITYLHEEC
601: RDCIVHCDIK PENILVDDNF AAKVSDFGLA KLLNPKDNRY NMSSVRGTRG YLAPEWLANL PITSKSDVYS YGMVLLELVS GKRNFDVSEK TNHKKFSIWA
701: YEEFEKGNTK AILDTRLSED QTVDMEQVMR MVKTSFWCIQ EQPLQRPTMG KVVQMLEGIT EIKNPLCPKT ISEVSFSGNS MSTSHASMFV ASGPTRSSSF
801: SATRSFQTMG ITSSGPASTR ISEGSMLGS
Arabidopsis Description
G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Source:UniProtKB/Swiss-Prot;Acc:Q9XID3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.