Factsheet for TraesCS3B01G107000.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plasma membrane
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G091800.1	Wheat	endoplasmic reticulum, nucleus, plasma membrane	78.5	82.2
TraesCS7B01G196400.2	Wheat	cytosol, endoplasmic reticulum, plasma membrane, plastid	49.48	66.05
OQU76372	Sorghum	plasma membrane	62.08	64.08
Zm00001d045950_P003	Maize	cytosol, endoplasmic reticulum, plasma membrane	61.97	63.13
TraesCS3D01G480200.1	Wheat	mitochondrion	55.38	61.33
Os06t0494100-02	Rice	mitochondrion	59.65	61.07
GSMUA_Achr7P10190_001	Banana	plasma membrane	40.12	50.58
PGSC0003DMT400082723	Potato	endoplasmic reticulum, nucleus, plasma membrane, plastid	43.58	48.83
VIT_04s0008g05500.t01	Wine grape	cytosol, nucleus, plasma membrane	43.58	47.72
Solyc08g059730.1.1	Tomato	plasma membrane	44.28	47.4
KRH61766	Soybean	extracellular, plasma membrane	44.62	47.3
KRH05175	Soybean	plasma membrane	44.16	47.04
KRH52432	Soybean	endoplasmic reticulum, plasma membrane, vacuole	44.28	46.88
KRH15882	Soybean	plasma membrane	43.7	46.67
CDX72354	Canola	plasma membrane	43.24	45.44
AT4G32300.1	Thale cress	plasma membrane	42.89	45.19
CDY13481	Canola	plasma membrane	42.89	45.13
Bra023955.1-P	Field mustard	plasma membrane	42.77	45.07
CDY23321	Canola	plasma membrane	42.66	44.67
Bra040074.1-P	Field mustard	cytosol	9.13	44.38
CDX75235	Canola	endoplasmic reticulum, plasma membrane	41.04	43.83
KRH09726	Soybean	plasma membrane	41.04	43.61
KRH23578	Soybean	endoplasmic reticulum, plasma membrane	40.81	43.42
VIT_09s0002g06830.t01	Wine grape	plasma membrane	41.04	39.62
VIT_11s0016g05440.t01	Wine grape	plasma membrane	36.42	38.79
CDY39882	Canola	plasma membrane	35.84	37.39
TraesCS7B01G273000.1	Wheat	plastid	17.11	36.63
TraesCS6B01G444200.1	Wheat	cytosol	21.16	35.4
CDX68834	Canola	plasma membrane	37.23	32.79
TraesCS5B01G468100.1	Wheat	nucleus	21.62	32.08
TraesCS3B01G079400.1	Wheat	cytosol, plasma membrane, plastid	18.73	31.58
TraesCS6B01G445200.1	Wheat	cytosol	23.35	31.37
TraesCS6B01G444600.1	Wheat	plasma membrane	28.32	29.73
TraesCS2B01G290100.3	Wheat	plasma membrane	28.55	29.44
TraesCS3B01G077000.1	Wheat	plasma membrane	21.73	29.38
TraesCS3B01G076900.1	Wheat	plasma membrane	21.39	28.82
TraesCS2B01G449900.1	Wheat	extracellular, plasma membrane	27.63	28.59
TraesCS5B01G520600.1	Wheat	plasma membrane	27.51	27.55
TraesCS6B01G361900.1	Wheat	plasma membrane	28.09	27.21
TraesCS3B01G075300.1	Wheat	plasma membrane	12.49	26.02
TraesCS5B01G000800.1	Wheat	plasma membrane	29.02	25.72
TraesCS5B01G236200.1	Wheat	plasma membrane	27.86	25.16
Bra011337.1-P	Field mustard	plasma membrane	36.99	20.08
TraesCS5B01G520400.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	9.94	19.55

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:18.4.1.24.2	Gene3D:2.90.10.10	Gene3D:3.30.200.20	InterPro:Bulb-type_lectin_dom	InterPro:Bulb-type_lectin_dom_sf	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001480	InterPro:IPR003609	InterPro:IPR036426
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF01453	PIRSF:PIRSF000641	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PFscan:PS50927	PFscan:PS50948	PANTHER:PTHR27002	PANTHER:PTHR27002:SF31	InterPro:Pan_app
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00108	SMART:SM00220	InterPro:SRK-like_kinase	SUPFAM:SSF51110
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3B01G107000	EnsemblPlants:TraesCS3B01G107000.1	TIGR:cd00028
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3B:-:72481401..72484129

Molecular Weight (calculated)

95285.1 Da

IEP (calculated)

7.203

GRAVY (calculated)

-0.021

Length

865 amino acids

Sequence
(BLAST)

001: MTGNMWQRIA TPYIRYLKPS LAPPHHHMYE QQYSLMNIAS KTMFQMCIMV ASLLIASGDV AAARQQHALM RGFVLLRMLV IANLWIICSG SVQKQVLLPG
101: FSASENDYIH NNAIFLVSNG TVYGLGFVSS SASASNSSYL LSVVHLPSYT VIWTANANSP VSSMDTFVFD KDGNAYLWSQ GSTIWTANLS GKGASIRLLD
201: SGNLIVLGKD GSSLVWQSFS YPANTLVSGQ SFTDGMTLVR QSSTHNISYT LGITSGDMRL YAGFQNPQPY WSALQDTRLI VNMDGAIYSS NLSSASWCFY
301: DKSGSLLSEL VIAQQGDAND TLIAVLGEDG SLSFYILQTT YDTNTTALPT PIPEDSCDMP AECSPYSVCI SGAGCQCPSA LGTFPNCNPG LISPCNSKED
401: FQLAQVDSGV GYIGTRFTPP LARTNITGCK DACMSNCSCI AMFFEQTSGN CFLFNQIGSL REKDRREPAS VSFIKVSKVG SGGGRHTVIT VVIVVVLLVV
501: IGVLVYVGFS IYRHRWRQPS PSQEQDDGFL QTISGAPMRF TYTELRGATN NFADKLGQGG FGSVYLGTLP DGSSIAVKKP EGLGQGEKEF RSEMTTIGNI
601: HHVHLVKLRG FCVEGAQRLL AYEYMAKGSL NRWIFSSTVD GPLLDWDTRF HIALGTAKGL AYLHQDCESK IIHCDIKPEN VLLDDNFHAK VADFGLAKLM
701: SREQSHVFTR LRGTRDYVAP EWITNYAISD KSDVYSYGIV LLEIISGRRS FDPLEASEKA HFPPFAFKKL EEGDLRNIVD AKLAYDDGDG RVEIAIRVAL
801: WCVQQDFSRR LPRGRELSRC LKASVMCHSR RRPRMLWTGS IRVLSSRLIL YFQLCSCLVP DDMLE

Best Arabidopsis Sequence Match ( AT4G32300.1 )
(BLAST)

001: MRGVFIVIVT CLVFLPDPLR AGVASIGSIT PGFGGSQMNY INNDGIFLES NNSAFGFGFV TTQDSVTLFT LSIIHKSSTK LIWSANRASP VSNSDKFVFD
101: DNGNVVMEGT EVWRLDNSGK NASRIELRDS GNLVVVSVDG TSIWESFDHP TDTLITNQAF KEGMKLTSSP SSSNMTYALE IKSGDMVLSV NSLTPQVYWS
201: MANARERIIN KDGGVVTSSS LLGNSWRFFD QKQVLLWQFV FSDNKDDNTT WIAVLGNNGV ISFSNLGSGA SAADSSTKIP SDLCGTPEPC GPYYVCSGSK
301: VCGCVSGLSR ARSDCKTGIT SPCKKTKDNA TLPLQLVSAG DGVDYFALGY APPFSKKTDL DSCKEFCHNN CSCLGLFFQN SSGNCFLFDY IGSFKTSGNG
401: GSGFVSYIKI ASTGSGGGDN GEDDGKHFPY VVIIVVVTVF IIAVLIFVAF RIHKRKKMIL EAPQESSEED NFLENLSGMP IRFAYKDLQS ATNNFSVKLG
501: QGGFGSVYEG TLPDGSRLAV KKLEGIGQGK KEFRAEVSII GSIHHLHLVR LRGFCAEGAH RLLAYEFLSK GSLERWIFRK KDGDVLLDWD TRFNIALGTA
601: KGLAYLHEDC DARIVHCDIK PENILLDDNF NAKVSDFGLA KLMTREQSHV FTTMRGTRGY LAPEWITNYA ISEKSDVYSY GMVLLELIGG RKNYDPSETS
701: EKCHFPSFAF KKMEEGKLMD IVDGKMKNVD VTDERVQRAM KTALWCIQED MQTRPSMSKV VQMLEGVFPV VQPPSSSTMG SRLYSSFFKS ISEDGGATTS
801: SGPSDCNSEN YLSAVRLSGP R

Arabidopsis Description

SD25G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWZ5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.