Factsheet for VIT_09s0002g06830.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 6
extracellular 1
golgi 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	plasma membrane
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040074.1-P	Field mustard	cytosol	12.28	61.8
VIT_04s0008g05500.t01	Wine grape	cytosol, nucleus, plasma membrane	52.23	59.24
KRH23578	Soybean	endoplasmic reticulum, plasma membrane	50.0	55.1
KRH09726	Soybean	plasma membrane	49.67	54.67
TraesCS7B01G196400.2	Wheat	cytosol, endoplasmic reticulum, plasma membrane, plastid	38.84	53.7
CDX75235	Canola	endoplasmic reticulum, plasma membrane	47.77	52.84
AT4G32300.1	Thale cress	plasma membrane	48.21	52.62
GSMUA_Achr7P10190_001	Banana	plasma membrane	40.18	52.48
CDX72354	Canola	plasma membrane	48.1	52.37
CDY13481	Canola	plasma membrane	47.88	52.19
Bra023955.1-P	Field mustard	plasma membrane	47.66	52.01
CDY23321	Canola	plasma membrane	47.1	51.09
OQU76372	Sorghum	plasma membrane	47.77	51.07
Zm00001d045950_P003	Maize	cytosol, endoplasmic reticulum, plasma membrane	47.77	50.41
TraesCS7D01G231000.1	Wheat	mitochondrion, plasma membrane	46.65	49.7
Os06t0494100-02	Rice	mitochondrion	46.09	48.88
TraesCS7A01G230900.1	Wheat	mitochondrion, plasma membrane	45.54	48.69
HORVU7Hr1G047150.8	Barley	mitochondrion, plasma membrane	45.54	47.0
TraesCS3A01G091800.1	Wheat	endoplasmic reticulum, nucleus, plasma membrane	41.96	45.52
TraesCS3D01G480200.1	Wheat	mitochondrion	39.4	45.2
VIT_11s0016g05440.t01	Wine grape	plasma membrane	38.62	42.61
CDY39882	Canola	plasma membrane	39.06	42.22
TraesCS3B01G107000.1	Wheat	plasma membrane	39.62	41.04
VIT_12s0028g01450.t01	Wine grape	plasma membrane	19.08	40.71
CDX68834	Canola	plasma membrane	42.63	38.9
VIT_08s0032g00830.t01	Wine grape	cytosol	4.35	38.24
VIT_11s0016g04840.t01	Wine grape	plasma membrane	19.08	38.0
VIT_08s0032g00810.t01	Wine grape	cytosol	7.48	37.22
VIT_18s0086g00200.t01	Wine grape	cytosol	22.88	33.12
VIT_12s0028g01430.t01	Wine grape	plasma membrane	28.12	31.54
VIT_16s0050g01920.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	26.12	31.37
VIT_18s0086g00210.t01	Wine grape	plasma membrane	29.35	30.98
VIT_12s0028g01640.t01	Wine grape	plasma membrane	22.88	30.87
VIT_12s0028g01460.t01	Wine grape	plasma membrane	26.67	30.76
VIT_12s0028g01530.t01	Wine grape	plasma membrane	28.57	30.4
VIT_16s0050g01880.t01	Wine grape	plasma membrane	28.79	30.11
VIT_12s0028g01650.t01	Wine grape	plasma membrane	26.9	28.62
VIT_12s0028g01280.t01	Wine grape	plasma membrane	26.79	27.87
VIT_12s0028g01630.t01	Wine grape	plastid	26.0	26.06
Bra011337.1-P	Field mustard	plasma membrane	43.75	24.59
VIT_18s0001g03390.t01	Wine grape	plastid	21.76	22.97
VIT_12s0028g01490.t01	Wine grape	cytosol	2.57	20.91
VIT_12s0028g01270.t01	Wine grape	plasma membrane	27.9	20.28
VIT_12s0028g01520.t01	Wine grape	plasma membrane	28.12	19.08

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:18.4.1.24.2	Gene3D:2.90.10.10	Gene3D:3.30.200.20	InterPro:Bulb-type_lectin_dom	InterPro:Bulb-type_lectin_dom_sf	ProteinID:CBI36322
ProteinID:CBI36322.3	UniProt:D7U126	EMBL:FN596494	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0019538	GO:GO:0031625	InterPro:IPR000719	InterPro:IPR001480	InterPro:IPR036426	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PFAM:PF01453	PIRSF:PIRSF000641	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS50927	PANTHER:PTHR27002	PANTHER:PTHR27002:SF31	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00108
SMART:SM00220	InterPro:SRK-like_kinase	SUPFAM:SSF51110	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix
UniParc:UPI0001BE4ABF	ArrayExpress:VIT_09s0002g06830	EnsemblPlantsGene:VIT_09s0002g06830	EnsemblPlants:VIT_09s0002g06830.t01	SEG:seg	:

Description

No Description!

Coordinates

chr9:-:6731961..6735116

Molecular Weight (calculated)

100852.0 Da

IEP (calculated)

6.993

GRAVY (calculated)

-0.182

Length

896 amino acids

Sequence
(BLAST)

001: MSWNPERAKS QEPIALETQL FLHQSQRNEV SYVVVICHLL LSSINTFTQP FCVLDLKMVF STVEPTKHFH YSFLQCSFLT FRNQYMGAAR ETMGWFRFLR
101: TFCLCLILVL KICMASTQNT GQIYPGFQGS QMEWKDNKGM FLLSNSSTFA LGFLNTLEGL FVLVVIHVAS SKAVWTANRS FLIQNSDKFV FEKNGNAYLK
201: GGDKIIWSTD TAGQGVTAME LQDTGNLVVL GENGRILWQS FSHPTDTLLS GQEFVEGMKL KGFSNRDNLF NYLEMKSGDL ILYAGFQTPQ TYWSMSNESR
301: KTIYKGHGKV HSASMMSNSW NFYDQNQALV WQFNFSENLD PNVTWAGVLD SEGSISFYDL QKGNLAPAES TKIPQNSCSV PEPCEPYYVC SVDNRCQCPS
401: ALNSSVNCKP QITSVCNVSK NSVELLHNSS GNCFLFDQIG SFQRSNWYSS GFISYVKVSN NGDLDGGQNR SREERKGGKI ILVIVLIAVA TVLVIFGVVY
501: LGFRYRREKE IQECSPDNLE EDDFLDSISG MPIRFRYKEL QNATSNFSEK LGQGGFGSVY KGVLPDGTQL AVKKLEGVGQ GKKEFRAEVC TIGSIHHVHL
601: VKLKGFCNEG AHRLLVYEFL GKGSLDKLIF KNNRKDLLLD WETRFSIALG TAKGLAYLHE ECDPKIIHCD IKPENVLLDD NYLAKVSDFG LAKLMNRDQS
701: HVFTTVRGTR GYLAPEWIAN HAISEKSDVF SFGMVLLEII GGRKNYDPKE TAQKAHFPSY AFEKMKEGNL REILDPELKI DGNYEKVSNA IKVALLCIQE
801: EMDRRPPMTK VVQMLEGVCD VPQPPTTSQR IFHIYSTLLK SSSEEGTSSE QNLLEPIDWN SLAPSNTLVM PLCTFLIMFK ISSFALVGIR KFSSFL

Best Arabidopsis Sequence Match ( AT4G32300.1 )
(BLAST)

001: MRGVFIVIVT CLVFLPDPLR AGVASIGSIT PGFGGSQMNY INNDGIFLES NNSAFGFGFV TTQDSVTLFT LSIIHKSSTK LIWSANRASP VSNSDKFVFD
101: DNGNVVMEGT EVWRLDNSGK NASRIELRDS GNLVVVSVDG TSIWESFDHP TDTLITNQAF KEGMKLTSSP SSSNMTYALE IKSGDMVLSV NSLTPQVYWS
201: MANARERIIN KDGGVVTSSS LLGNSWRFFD QKQVLLWQFV FSDNKDDNTT WIAVLGNNGV ISFSNLGSGA SAADSSTKIP SDLCGTPEPC GPYYVCSGSK
301: VCGCVSGLSR ARSDCKTGIT SPCKKTKDNA TLPLQLVSAG DGVDYFALGY APPFSKKTDL DSCKEFCHNN CSCLGLFFQN SSGNCFLFDY IGSFKTSGNG
401: GSGFVSYIKI ASTGSGGGDN GEDDGKHFPY VVIIVVVTVF IIAVLIFVAF RIHKRKKMIL EAPQESSEED NFLENLSGMP IRFAYKDLQS ATNNFSVKLG
501: QGGFGSVYEG TLPDGSRLAV KKLEGIGQGK KEFRAEVSII GSIHHLHLVR LRGFCAEGAH RLLAYEFLSK GSLERWIFRK KDGDVLLDWD TRFNIALGTA
601: KGLAYLHEDC DARIVHCDIK PENILLDDNF NAKVSDFGLA KLMTREQSHV FTTMRGTRGY LAPEWITNYA ISEKSDVYSY GMVLLELIGG RKNYDPSETS
701: EKCHFPSFAF KKMEEGKLMD IVDGKMKNVD VTDERVQRAM KTALWCIQED MQTRPSMSKV VQMLEGVFPV VQPPSSSTMG SRLYSSFFKS ISEDGGATTS
801: SGPSDCNSEN YLSAVRLSGP R

Arabidopsis Description

SD25G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWZ5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.