Factsheet for VIT_12s0028g01530.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 7
golgi 5
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0028g01430.t01	Wine grape	plasma membrane	79.45	83.73
VIT_08s0032g00830.t01	Wine grape	cytosol	9.14	75.49
Solyc07g055410.1.1	Tomato	cytosol	6.65	69.14
Solyc07g055430.1.1	Tomato	cytosol	9.74	67.77
PGSC0003DMT400044735	Potato	cytosol	13.42	64.2
Solyc07g055400.1.1	Tomato	cytosol	17.7	63.4
Solyc07g055580.1.1	Tomato	plasma membrane	21.97	62.93
HORVU3Hr1G002240.1	Barley	cytosol	18.29	62.6
Solyc07g055420.1.1	Tomato	cytosol	16.15	62.39
VIT_12s0028g01450.t01	Wine grape	plasma membrane	30.29	60.71
Solyc07g055630.2.1	Tomato	cytosol	22.8	60.57
Solyc07g055570.1.1	Tomato	cytosol	12.83	59.34
VIT_08s0032g00810.t01	Wine grape	cytosol	12.59	58.89
Solyc07g055650.1.1	Tomato	cytosol, plasma membrane, plastid	28.5	57.14
TraesCS3A01G063800.1	Wheat	cytosol	11.76	55.62
TraesCS3A01G015300.1	Wheat	cytosol	22.45	55.43
VIT_12s0028g01460.t01	Wine grape	plasma membrane	50.95	55.21
TraesCS3A01G014700.1	Wheat	cytosol	21.62	54.65
VIT_12s0028g01490.t01	Wine grape	cytosol	7.13	54.55
PGSC0003DMT400044620	Potato	cytosol	33.02	53.98
HORVU2Hr1G098980.1	Barley	cytosol, mitochondrion	7.72	53.72
PGSC0003DMT400044522	Potato	cytosol, nucleus, plasma membrane	46.32	53.57
PGSC0003DMT400044506	Potato	plasma membrane	34.09	53.05
TraesCS6D01G386500.1	Wheat	cytosol	32.54	51.5
TraesCS5A01G458600.1	Wheat	nucleus, plasma membrane, plastid	25.77	51.06
TraesCSU01G045500.1	Wheat	plasma membrane	23.16	50.78
TraesCS6B01G444200.1	Wheat	cytosol	31.0	50.48
VIT_12s0028g01280.t01	Wine grape	plasma membrane	51.31	50.17
TraesCS7B01G273000.1	Wheat	plastid	23.99	50.0
PGSC0003DMT400044668	Potato	plasma membrane	49.64	49.64
GSMUA_Achr6P05560_001	Banana	plasma membrane	31.24	49.44
PGSC0003DMT400044608	Potato	plasma membrane	48.57	48.63
HORVU3Hr1G002230.1	Barley	plasma membrane	9.26	48.45
PGSC0003DMT400044515	Potato	plasma membrane	47.62	48.02
PGSC0003DMT400096753	Potato	plasma membrane	47.39	47.9
PGSC0003DMT400044503	Potato	extracellular, plasma membrane, vacuole	46.79	47.76
TraesCS1D01G014300.1	Wheat	plasma membrane	37.41	47.58
TraesCS5B01G468100.1	Wheat	nucleus	32.9	47.51
HORVU1Hr1G005720.5	Barley	cytosol, plasma membrane	43.23	47.27
PGSC0003DMT400044528	Potato	plasma membrane	47.39	47.16
TraesCS6B01G445200.1	Wheat	cytosol	35.87	46.89
TraesCS3D01G013600.1	Wheat	plastid	23.4	46.68
TraesCS5D01G018800.1	Wheat	cytosol	34.92	45.58
VIT_12s0028g01520.t01	Wine grape	plasma membrane	71.02	45.27
Os04t0303100-00	Rice	plasma membrane	44.77	45.15
HORVU6Hr1G092620.1	Barley	plasma membrane	42.87	45.12
VIT_12s0028g01640.t01	Wine grape	plasma membrane	35.15	44.58
TraesCS6D01G386200.1	Wheat	plasma membrane	42.99	44.53
TraesCS2B01G290100.3	Wheat	plasma membrane	44.3	44.46
TraesCSU01G171900.1	Wheat	plasma membrane	42.87	44.13
HORVU5Hr1G001800.2	Barley	cytosol	36.1	44.12
GSMUA_Achr6P05570_001	Banana	mitochondrion, plastid	30.76	44.05
EES15335	Sorghum	plasma membrane	44.18	43.92
TraesCS3A01G016100.1	Wheat	cytosol	6.41	43.9
TraesCSU01G045100.1	Wheat	cytosol	6.41	43.9
TraesCSU01G166600.1	Wheat	cytosol	6.41	43.9
TraesCS2A01G271900.1	Wheat	plasma membrane	40.97	43.89
TraesCS6B01G444600.1	Wheat	plasma membrane	42.87	43.81
TraesCS1A01G017200.1	Wheat	plasma membrane	43.23	43.8
TraesCS7A01G354700.1	Wheat	plastid	36.82	43.66
EES14230	Sorghum	plasma membrane	41.21	43.65
TraesCS4A01G026200.1	Wheat	cytosol, nucleus, plasma membrane	37.17	43.59
TraesCS3D01G012800.1	Wheat	plasma membrane	22.33	42.53
TraesCS5D01G469700.1	Wheat	plasma membrane	44.42	42.5
TraesCS3A01G015100.1	Wheat	plasma membrane	23.87	42.49
Os02t0234450-00	Rice	plasma membrane	42.16	42.46
Zm00001d016223_P001	Maize	endoplasmic reticulum, plasma membrane	41.09	42.45
HORVU3Hr1G002210.3	Barley	plasma membrane	24.35	42.27
TraesCS3B01G079400.1	Wheat	cytosol, plasma membrane, plastid	25.65	42.11
EES00096	Sorghum	plasma membrane	43.35	42.1
TraesCS3A01G064400.1	Wheat	cytosol	25.18	41.65
OQU80090	Sorghum	plasma membrane	38.84	41.6
KXG29880	Sorghum	plasma membrane	41.33	41.48
Zm00001d025065_P001	Maize	cytosol	35.27	41.31
HORVU7Hr1G089080.11	Barley	plasma membrane	41.09	41.29
TraesCS2B01G449900.1	Wheat	extracellular, plasma membrane	40.97	41.27
TraesCS2A01G429400.1	Wheat	plasma membrane	40.86	41.15
KXG27741	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	38.24	41.12
EER88498	Sorghum	plasma membrane	40.97	41.07
HORVU2Hr1G100250.10	Barley	plasma membrane	40.5	40.99
TraesCS2D01G427100.1	Wheat	extracellular, plasma membrane	40.5	40.99
TraesCS2A01G580900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	38.6	40.93
HORVU2Hr1G124190.2	Barley	endoplasmic reticulum, plasma membrane	38.48	40.7
HORVU2Hr1G124250.1	Barley	endoplasmic reticulum, plasma membrane	38.48	40.7
TraesCS7D01G368100.1	Wheat	plasma membrane	40.62	40.67
HORVU2Hr1G066280.1	Barley	plasma membrane	40.02	40.5
KXG37964	Sorghum	endoplasmic reticulum, golgi, vacuole	38.6	40.22
HORVU6Hr1G092730.1	Barley	plasma membrane	11.52	40.08
Zm00001d008891_P001	Maize	plasma membrane	42.04	40.0
TraesCS3A01G063700.1	Wheat	cytosol, plasma membrane, plastid	26.37	39.93
TraesCS3D01G064800.1	Wheat	cytosol, plasma membrane, plastid	24.94	39.92
HORVU5Hr1G000910.1	Barley	endoplasmic reticulum, plasma membrane	37.77	39.8
VIT_12s0028g01650.t01	Wine grape	plasma membrane	39.43	39.43
OQU86484	Sorghum	cytosol	9.62	38.76
TraesCS2D01G419800.1	Wheat	mitochondrion	28.27	38.64
VIT_12s0028g01630.t01	Wine grape	plastid	40.62	38.26
TraesCS3A01G064300.1	Wheat	cytosol	25.3	38.24
TraesCS3B01G076900.1	Wheat	plasma membrane	28.38	37.23
EES03148	Sorghum	plasma membrane	26.6	37.15
HORVU3Hr1G012100.2	Barley	plasma membrane	28.27	37.07
HORVU3Hr1G002220.1	Barley	plasma membrane	27.67	37.04
TraesCS3D01G063800.1	Wheat	plasma membrane	28.15	37.03
TraesCS3D01G064700.2	Wheat	plasma membrane	28.27	37.01
TraesCS3D01G062500.1	Wheat	plasma membrane	27.08	36.89
TraesCS3B01G077000.1	Wheat	plasma membrane	28.03	36.88
TraesCSU01G045400.1	Wheat	plasma membrane	27.79	36.62
TraesCS3D01G012900.1	Wheat	plasma membrane	28.15	36.57
Os01t0113350-00	Rice	plasma membrane, vacuole	28.27	36.5
OQU86485	Sorghum	plasma membrane	26.96	36.44
TraesCS3A01G016300.1	Wheat	plasma membrane	27.43	36.15
VIT_12s0028g01270.t01	Wine grape	plasma membrane	52.73	36.01
TraesCS3D01G062600.1	Wheat	plasma membrane	27.43	35.76
Zm00001d053135_P001	Maize	plasma membrane	27.32	35.66
Zm00001d053087_P001	Maize	plasma membrane	27.2	35.07
TraesCS2D01G419700.1	Wheat	cytosol	27.55	34.99
Os01t0113650-00	Rice	mitochondrion, plasma membrane	27.2	34.91
TraesCS2D01G591000.1	Wheat	plasma membrane	23.87	34.78
VIT_04s0008g05500.t01	Wine grape	cytosol, nucleus, plasma membrane	32.19	34.3
VIT_11s0016g04840.t01	Wine grape	plasma membrane	17.81	33.33
VIT_18s0086g00200.t01	Wine grape	cytosol	23.28	31.66
HORVU3Hr1G012080.10	Barley	plastid	18.29	30.43
VIT_16s0050g01920.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	26.96	30.43
VIT_16s0050g01880.t01	Wine grape	plasma membrane	30.64	30.11
VIT_11s0016g05440.t01	Wine grape	plasma membrane	28.38	29.43
VIT_18s0086g00210.t01	Wine grape	plasma membrane	28.98	28.74
VIT_09s0002g06830.t01	Wine grape	plasma membrane	30.4	28.57
HORVU3Hr1G012050.1	Barley	plasma membrane	13.78	28.09
Solyc07g055640.1.1	Tomato	cytosol	27.2	27.89
TraesCS3B01G075300.1	Wheat	plasma membrane	13.42	27.23
TraesCS3D01G062900.1	Wheat	extracellular, plasma membrane, vacuole	10.57	23.55
TraesCS6A01G402100.1	Wheat	plasma membrane	43.47	21.88
VIT_18s0001g03390.t01	Wine grape	plastid	19.36	19.2

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
EntrezGene:100243728	wikigene:100243728	EntrezGene:100243833	wikigene:100243833	EntrezGene:100245340	wikigene:100245340
MapMan:18.4.1.24.2	Gene3D:2.90.10.10	Gene3D:3.30.200.20	InterPro:Bulb-type_lectin_dom	InterPro:Bulb-type_lectin_dom_sf	ProteinID:CCB47410
ProteinID:CCB47410.1	UniProt:F6H542	EMBL:FN595235	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR001480	InterPro:IPR003609	InterPro:IPR036426	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100243728
wikigene:LOC100243728	EntrezGene:LOC100243833	wikigene:LOC100243833	EntrezGene:LOC100245340	wikigene:LOC100245340	PFAM:PF00069
PFAM:PF01453	PFAM:PF08276	PIRSF:PIRSF000641	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS50927	PFscan:PS50948	PANTHER:PTHR27002	PANTHER:PTHR27002:SF178	InterPro:Pan_app	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00108	SMART:SM00220	InterPro:SRK-like_kinase	SUPFAM:SSF51110	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002109811	ArrayExpress:VIT_12s0028g01530	EnsemblPlantsGene:VIT_12s0028g01530
EnsemblPlants:VIT_12s0028g01530.t01	RefSeq:XP_002277643	RefSeq:XP_002277643.1	RefSeq:XP_002277755	RefSeq:XP_002277755.2	RefSeq:XP_002277954
RefSeq:XP_002277954.2	:	:	:	:	:

Description

No Description!

Coordinates

chr12:+:2196401..2198929

Molecular Weight (calculated)

93738.5 Da

IEP (calculated)

5.267

GRAVY (calculated)

-0.152

Length

842 amino acids

Sequence
(BLAST)

001: MAWHGLESWY VPVLSFLALI SLFYGATLDL DDDPNIVARL SSSWTNVEQE LTYDQGDEMV TVQPILDIKS EGRGFCFGFY CRYLRDECLL AVVIYHPINF
101: LSIESPELVW SANRNDPVRV NATLQLTGGG DLILKDADGK FVWSTNTTGK SVSGLKLTEA GDVVLFDANN ATVWQSFDHP TDALLQGQKM VSAGKKLTAS
201: LATDNRTEGM LSLSVTNEAL VAYVESNPPQ FYYRLEGSDT DTKGKTKQNY ILLGNENLDV IIHGAEQNHP DSRISIPANL SAQFIKLGPD GHLRAYGWKD
301: YDWEAADLLT DWLSFPNHLS DVDDCQYPLV CGKYGICSER QCSCPPPSPD GTNYFRPVDD NLPSHGCYAT KPIACGSSQY HHLLELQHVC YFAFSSDISS
401: TNVENCKQAC LNNCSCKAAV FKYTDDPLHG DCCLLSEVFS LMTADRDDIN SFTFLKVAVS PIDIQKKKGH ARVILVSSLA AFFGVFIFMT TCFFLFRKKK
501: DSIEFEEDYL DQVSGMPTRF SFQDLKSTTQ NFSCKLGEGG FGSVYEGTLS NGAKVAVKHL EGLAQVKKSF SAEVETIGSI HHVNLVRLIG FCAEKSHRLL
601: VYEYMCNGSL DKWIFHKNQH LSLGWESRRK IILDIAKGLA YLHEECRQKI FHLDIKPQNI LLDEHLNAKV SDFGLSKLID KDQSQVVTTM RGTPGYLAPE
701: WLSSVITEKV DVYSFGVVLL EILCGRRNVD RSQPEEDLHL LGIFRRKANE GQVLDMVDKN SEDMQGHGAE VMELMKVAAW CLQNDYATRP SMSVVVKALE
801: GLVDIEGDLD YNFSFSPLAR GIAHKVAAAA TPIMPSALSG PR

Best Arabidopsis Sequence Match ( AT4G32300.1 )
(BLAST)

001: MRGVFIVIVT CLVFLPDPLR AGVASIGSIT PGFGGSQMNY INNDGIFLES NNSAFGFGFV TTQDSVTLFT LSIIHKSSTK LIWSANRASP VSNSDKFVFD
101: DNGNVVMEGT EVWRLDNSGK NASRIELRDS GNLVVVSVDG TSIWESFDHP TDTLITNQAF KEGMKLTSSP SSSNMTYALE IKSGDMVLSV NSLTPQVYWS
201: MANARERIIN KDGGVVTSSS LLGNSWRFFD QKQVLLWQFV FSDNKDDNTT WIAVLGNNGV ISFSNLGSGA SAADSSTKIP SDLCGTPEPC GPYYVCSGSK
301: VCGCVSGLSR ARSDCKTGIT SPCKKTKDNA TLPLQLVSAG DGVDYFALGY APPFSKKTDL DSCKEFCHNN CSCLGLFFQN SSGNCFLFDY IGSFKTSGNG
401: GSGFVSYIKI ASTGSGGGDN GEDDGKHFPY VVIIVVVTVF IIAVLIFVAF RIHKRKKMIL EAPQESSEED NFLENLSGMP IRFAYKDLQS ATNNFSVKLG
501: QGGFGSVYEG TLPDGSRLAV KKLEGIGQGK KEFRAEVSII GSIHHLHLVR LRGFCAEGAH RLLAYEFLSK GSLERWIFRK KDGDVLLDWD TRFNIALGTA
601: KGLAYLHEDC DARIVHCDIK PENILLDDNF NAKVSDFGLA KLMTREQSHV FTTMRGTRGY LAPEWITNYA ISEKSDVYSY GMVLLELIGG RKNYDPSETS
701: EKCHFPSFAF KKMEEGKLMD IVDGKMKNVD VTDERVQRAM KTALWCIQED MQTRPSMSKV VQMLEGVFPV VQPPSSSTMG SRLYSSFFKS ISEDGGATTS
801: SGPSDCNSEN YLSAVRLSGP R

Arabidopsis Description

SD25G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWZ5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.