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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 7
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG27741 Sorghum endoplasmic reticulum, extracellular, plasma membrane 67.94 68.2
KXG37964 Sorghum endoplasmic reticulum, golgi, vacuole 68.7 66.83
HORVU2Hr1G124250.1 Barley endoplasmic reticulum, plasma membrane 66.79 65.95
HORVU2Hr1G124190.2 Barley endoplasmic reticulum, plasma membrane 66.79 65.95
TraesCS2A01G580900.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 65.14 64.48
TraesCS2D01G591000.1 Wheat plasma membrane 42.75 58.13
Solyc07g055410.1.1 Tomato cytosol 5.98 58.02
VIT_08s0032g00830.t01 Wine grape cytosol 7.51 57.84
PGSC0003DMT400044735 Potato cytosol 12.34 55.11
Solyc07g055420.1.1 Tomato cytosol 14.76 53.21
Solyc07g055670.1.1 Tomato cytosol 15.78 52.32
Solyc07g055430.1.1 Tomato cytosol 8.02 52.07
Solyc07g055580.1.1 Tomato plasma membrane 19.34 51.7
Solyc07g055400.1.1 Tomato cytosol 15.27 51.06
Solyc07g055630.2.1 Tomato cytosol 19.85 49.21
Solyc07g055650.1.1 Tomato cytosol, plasma membrane, plastid 25.57 47.86
VIT_12s0028g01450.t01 Wine grape plasma membrane 25.32 47.38
VIT_08s0032g00810.t01 Wine grape cytosol 10.56 46.11
GSMUA_Achr6P05560_001 Banana plasma membrane 30.15 44.55
Solyc07g055570.1.1 Tomato cytosol 10.31 44.51
PGSC0003DMT400044506 Potato plasma membrane 29.26 42.51
PGSC0003DMT400044620 Potato cytosol 27.48 41.94
PGSC0003DMT400044522 Potato cytosol, nucleus, plasma membrane 38.68 41.76
VIT_12s0028g01460.t01 Wine grape plasma membrane 41.09 41.57
EER88498 Sorghum plasma membrane 44.15 41.31
OQU86484 Sorghum cytosol 10.94 41.15
EES14230 Sorghum plasma membrane 41.35 40.88
EES15335 Sorghum plasma membrane 43.64 40.5
VIT_12s0028g01430.t01 Wine grape plasma membrane 40.97 40.3
GSMUA_Achr6P05570_001 Banana mitochondrion, plastid 29.26 39.12
VIT_12s0028g01530.t01 Wine grape plasma membrane 41.6 38.84
KXG29880 Sorghum plasma membrane 41.22 38.62
PGSC0003DMT400044673 Potato plasma membrane 40.84 38.58
EES00096 Sorghum plasma membrane 42.49 38.52
VIT_12s0028g01640.t01 Wine grape plasma membrane 31.93 37.8
PGSC0003DMT400044503 Potato extracellular, plasma membrane, vacuole 39.44 37.58
PGSC0003DMT400044608 Potato plasma membrane 40.08 37.46
EES03148 Sorghum plasma membrane 28.63 37.31
PGSC0003DMT400044668 Potato plasma membrane 39.95 37.29
PGSC0003DMT400044515 Potato plasma membrane 39.57 37.25
PGSC0003DMT400096753 Potato plasma membrane 39.31 37.09
PGSC0003DMT400044528 Potato plasma membrane 39.57 36.76
PGSC0003DMT400073253 Potato plasma membrane 38.8 36.61
VIT_12s0028g01280.t01 Wine grape plasma membrane 39.69 36.24
Solyc02g072070.2.1 Tomato plasma membrane 36.51 36.15
OQU86485 Sorghum plasma membrane 28.63 36.12
VIT_12s0028g01650.t01 Wine grape plasma membrane 36.64 34.2
VIT_12s0028g01630.t01 Wine grape plastid 37.4 32.89
OQU76372 Sorghum plasma membrane 33.08 31.03
KXG19268 Sorghum plasma membrane 17.18 29.67
OQU90662 Sorghum plasma membrane 30.15 27.82
EES07585 Sorghum plasma membrane 29.52 26.24
VIT_12s0028g01270.t01 Wine grape plasma membrane 40.2 25.63
VIT_12s0028g01520.t01 Wine grape plasma membrane 42.24 25.13
EES17510 Sorghum mitochondrion, plasma membrane 29.52 25.08
EES01170 Sorghum plasma membrane, plastid 16.03 24.95
EER96846 Sorghum plasma membrane 28.63 24.89
Solyc07g055640.1.1 Tomato cytosol 24.94 23.87
OQU79589 Sorghum plasma membrane 16.54 20.77
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:18.4.1.24.2Gene3D:2.90.10.10Gene3D:3.30.200.20UniProt:A0A1Z5R8L3InterPro:Bulb-type_lectin_domInterPro:Bulb-type_lectin_dom_sf
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740
GO:GO:0019538InterPro:IPR000719InterPro:IPR001480InterPro:IPR003609InterPro:IPR036426InterPro:Kinase-like_dom_sf
EnsemblPlants:OQU80090ProteinID:OQU80090ProteinID:OQU80090.1PFAM:PF00069PFAM:PF01453PIRSF:PIRSF000641
ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS50927PFscan:PS50948PANTHER:PTHR27002
PANTHER:PTHR27002:SF353InterPro:Pan_appInterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00108SMART:SM00220
EnsemblPlantsGene:SORBI_3007G077766InterPro:SRK-like_kinaseSUPFAM:SSF51110SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI000B8BB173SEG:seg:::
Description
hypothetical protein
Coordinates
chr7:-:9087076..9089476
Molecular Weight (calculated)
86625.9 Da
IEP (calculated)
6.966
GRAVY (calculated)
-0.046
Length
786 amino acids
Sequence
(BLAST)
001: MALLFFLGFC SPHSILALPS SVPVVPQPKF NPNFWIITTM QRAEGSSNTS IGQGDTTFLP VLHNSGFFHS YILVIALSGP QGPIVWSANP DNPVSQNAIL
101: TFTGEGDLLL QDGGTLIWST ATKNKSVAGM RLDLSGNLVL FDQNSSLVWQ SFDHPTDTLV MGQSLCSGTK LSAKLSNPKW LSSRFYLSAE GNGLRHYFEP
201: AAYTQLFHPT ATSTPTTSSA CYAFANGSLG FPDKIFSLPS ASSLQFMRLE SDGHLRLYEM QEQNSPRMLL DVLSTVVAFC DYPLACGDYG VCNSGQCSCP
301: SFSTFRFQNE RLPGSGCIPL SGISCEHAHD HKLIPLNNIS YFSNSSFSKL AASGYSEYDC KQSCLMNCSC QVVIFQNDSG TDVGHCLLLS EKMLILFADD
401: SSNHFSAFVK IQDSPPEKRM VIIVASCTAA GFSLMTIFVC AVIWKRRKKD EELLFDVILG TPKRFSFDEL KVATSNFSMK LGHGGFGSVF KGRIGKETIA
501: VKRLEGVEQG TEEFLAEVKT IGRMHHRNLV RLVGFCAEKS HKLLVYGYLS NGSLDKWIFH TSPVFTLSWR TRRNIIIAVA RGLAFLHEEC KEKIAHLDIK
601: PQNILLDDEF NAKLSDFGLS KMINRDQSKV MTRMRGTRGY LAPEWLGSKI TEKADIYSFG IVMIEIICGR ENLDESQPEG SVHLISLLQE KARSGQVSDL
701: VDSSSNDMKS HMEEVMQTMK LAMWCLQVDS CARPLMSTVA KVLEGVKSLD ATPDCTFVPN FASSNIGVAE SRSSYVPSES HLSGPR
Best Arabidopsis Sequence Match ( AT1G34300.1 )
(BLAST)
001: MAVKTPFLKL LPLLLLLLHF PFSFSTIPLG SVIYASGSNQ NWPSPNSTFS VSFVPSPSPN SFLAAVSFAG SVPIWSAGTV DSRGSLRLHT SGSLRLTNGS
101: GTTVWDSKTD RLGVTSGSIE DTGEFILLNN RSVPVWSSFD NPTDTIVQSQ NFTAGKILRS GLYSFQLERS GNLTLRWNTS AIYWNHGLNS SFSSNLSSPR
201: LSLQTNGVVS IFESNLLGGA EIVYSGDYGD SNTFRFLKLD DDGNLRIYSS ASRNSGPVNA HWSAVDQCLV YGYCGNFGIC SYNDTNPICS CPSRNFDFVD
301: VNDRRKGCKR KVELSDCSGN TTMLDLVHTR LFTYEDDPNS ESFFAGSSPC RANCLSSVLC LASVSMSDGS GNCWQKHPGS FFTGYQWPSV PSTSYVKVCG
401: PVVANTLERA TKGDDNNSKV HLWIVAVAVI AGLLGLVAVE IGLWWCCCRK NPRFGTLSSH YTLLEYASGA PVQFTYKELQ RCTKSFKEKL GAGGFGTVYR
501: GVLTNRTVVA VKQLEGIEQG EKQFRMEVAT ISSTHHLNLV RLIGFCSQGR HRLLVYEFMR NGSLDNFLFT TDSAKFLTWE YRFNIALGTA KGITYLHEEC
601: RDCIVHCDIK PENILVDDNF AAKVSDFGLA KLLNPKDNRY NMSSVRGTRG YLAPEWLANL PITSKSDVYS YGMVLLELVS GKRNFDVSEK TNHKKFSIWA
701: YEEFEKGNTK AILDTRLSED QTVDMEQVMR MVKTSFWCIQ EQPLQRPTMG KVVQMLEGIT EIKNPLCPKT ISEVSFSGNS MSTSHASMFV ASGPTRSSSF
801: SATRSFQTMG ITSSGPASTR ISEGSMLGS
Arabidopsis Description
G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Source:UniProtKB/Swiss-Prot;Acc:Q9XID3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.