Skip to main content
crop-pal logo
Sorghum
Search for another protein from :
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • golgi 5
  • plasma membrane 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plastid 1
  • cytosol 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:secretory
ChloroP:plastid
EpiLoc:cytosol
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d008891_P001 Maize plasma membrane 80.62 78.98
PGSC0003DMT400044735 Potato cytosol 12.23 60.23
Solyc07g055410.1.1 Tomato cytosol 5.54 59.26
VIT_08s0032g00830.t01 Wine grape cytosol 6.92 58.82
Solyc07g055420.1.1 Tomato cytosol 14.65 58.26
Solyc07g055430.1.1 Tomato cytosol 7.96 57.02
Solyc07g055670.1.1 Tomato cytosol 15.46 56.54
Solyc07g055580.1.1 Tomato plasma membrane 19.15 56.46
Solyc07g055400.1.1 Tomato cytosol 14.65 54.04
EES14230 Sorghum plasma membrane 49.25 53.71
EES15335 Sorghum plasma membrane 52.02 53.25
TraesCS5D01G018800.1 Wheat cytosol 39.1 52.56
Solyc07g055630.2.1 Tomato cytosol 19.15 52.37
VIT_12s0028g01450.t01 Wine grape plasma membrane 24.57 50.71
HORVU5Hr1G001800.2 Barley cytosol 39.22 49.35
Solyc07g055650.1.1 Tomato cytosol, plasma membrane, plastid 23.64 48.81
VIT_08s0032g00810.t01 Wine grape cytosol 10.03 48.33
PGSC0003DMT400044506 Potato plasma membrane 29.99 48.06
OQU86484 Sorghum cytosol 11.53 47.85
PGSC0003DMT400044673 Potato plasma membrane 45.44 47.36
Solyc07g055570.1.1 Tomato cytosol 9.8 46.7
PGSC0003DMT400044620 Potato cytosol 27.45 46.21
EES03148 Sorghum plasma membrane 31.83 45.77
PGSC0003DMT400044522 Potato cytosol, nucleus, plasma membrane 38.41 45.74
EER88498 Sorghum plasma membrane 43.6 45.0
VIT_12s0028g01640.t01 Wine grape plasma membrane 34.37 44.88
VIT_12s0028g01460.t01 Wine grape plasma membrane 40.02 44.66
VIT_12s0028g01430.t01 Wine grape plasma membrane 40.72 44.18
KXG29880 Sorghum plasma membrane 42.56 43.98
KXG27741 Sorghum endoplasmic reticulum, extracellular, plasma membrane 39.68 43.93
VIT_12s0028g01530.t01 Wine grape plasma membrane 42.1 43.35
KXG37964 Sorghum endoplasmic reticulum, golgi, vacuole 40.02 42.95
PGSC0003DMT400044668 Potato plasma membrane 41.52 42.76
PGSC0003DMT400073253 Potato plasma membrane 40.83 42.5
OQU80090 Sorghum plasma membrane 38.52 42.49
PGSC0003DMT400044528 Potato plasma membrane 41.06 42.08
Solyc02g072070.2.1 Tomato plasma membrane 38.41 41.94
OQU86485 Sorghum plasma membrane 30.1 41.89
PGSC0003DMT400044503 Potato extracellular, plasma membrane, vacuole 39.79 41.82
PGSC0003DMT400096753 Potato plasma membrane 40.02 41.66
PGSC0003DMT400044515 Potato plasma membrane 40.02 41.56
PGSC0003DMT400044608 Potato plasma membrane 40.02 41.26
VIT_12s0028g01650.t01 Wine grape plasma membrane 39.79 40.97
VIT_12s0028g01280.t01 Wine grape plasma membrane 40.25 40.53
VIT_12s0028g01630.t01 Wine grape plastid 40.25 39.04
OQU76372 Sorghum plasma membrane 31.95 33.05
KXG19268 Sorghum plasma membrane 16.15 30.77
EES07585 Sorghum plasma membrane 30.1 29.52
VIT_12s0028g01270.t01 Wine grape plasma membrane 40.48 28.47
VIT_12s0028g01520.t01 Wine grape plasma membrane 43.25 28.39
OQU90662 Sorghum plasma membrane 27.34 27.82
EER96846 Sorghum plasma membrane 28.84 27.65
EES17510 Sorghum mitochondrion, plasma membrane 27.57 25.84
Solyc07g055640.1.1 Tomato cytosol 23.64 24.97
EES01170 Sorghum plasma membrane, plastid 14.3 24.55
OQU79589 Sorghum plasma membrane 15.11 20.93
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:18.4.1.24.2Gene3D:2.90.10.10Gene3D:3.30.200.20EntrezGene:8080500InterPro:Bulb-type_lectin_domInterPro:Bulb-type_lectin_dom_sf
UniProt:C5XL73ncoils:CoilEnsemblPlants:EES00096ProteinID:EES00096ProteinID:EES00096.1GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310
GO:GO:0016740GO:GO:0019538InterPro:IPR000719InterPro:IPR001480InterPro:IPR003609InterPro:IPR036426
InterPro:Kinase-like_dom_sfPFAM:PF00069PFAM:PF01453PFAM:PF08276PIRSF:PIRSF000641ScanProsite:PS00107
ScanProsite:PS00108PFscan:PS50011PFscan:PS50927PFscan:PS50948PANTHER:PTHR27002PANTHER:PTHR27002:SF329
InterPro:Pan_appInterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00108SMART:SM00220EnsemblPlantsGene:SORBI_3003G025300
InterPro:SRK-like_kinaseSUPFAM:SSF51110SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0001A843B4RefSeq:XP_002454976.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr3:+:2140516..2143119
Molecular Weight (calculated)
95347.0 Da
IEP (calculated)
6.456
GRAVY (calculated)
-0.099
Length
867 amino acids
Sequence
(BLAST)
001: MPPSHLLSLL LAVTVAATVD VVHAQGIPFP TPASTNLSTS WTISLKADGH GAQSFDYMDS TSVSVFLLQS IQSPPQEGLC FAACFYCVAP CEAFLFGVCI
101: VYVDGGGFLS WPNAGSPQVV WSANRDRLVR ENATLSFTAG GDLQLRNTAG GLVWSTGTSG QSVAGMTVTK SGNLVLFDRK NAAVWQSFDH PTDCLLPGQP
201: LVEGMRLTPN ASSTNWTTSN QLYLTVLSDG LYAFAESSPP QLYYQKTVTT KAGSRKTYMT LTNGSVAIFA SSSSVNVSTL QPNSMINMTA GEMEYVRLES
301: DGHLKLYRYK GIEGWPMVQD ILQGQVGSCA YPTVCGAYGI CVSGQCTCPT DGTATYFKQI DDRRINLGCV PVTPISCASM QYHQLLALSN VSYFNYIDTK
401: AALPQMIDEE SCKKACLQNC SCKAAFFQYG GNDTSQGSCY LPTQVFSLQV NQWQETHYSS SAYLKVQITR SPPPIPGPSN PNGTVSRSTP TRKGRIGAGV
501: IVGSTLAGVI FVLAVIIISL MVIRRRYQSR DDEDDFGEVP GMTTRFTFEQ LKVATEQFSK MIGKGGFGSV FEGQVGEQRV AVKQLDRADQ GKRDFLAEVE
601: TIGNIHHINL VTLIGFCAEK SHRLLVYEYM SQGSLDRWIY SQDASMSLDW HARCRIITDI AKGLAYLHEE CRQRIAHLDI KPQNILLDDN LSAKLSDFGL
701: SKMIDRDKSQ VITRMRGTPG YLAPEWLTSQ ITEKVDIYSF GVVVMEIISG RKNLDYSRPQ ESVHLISILQ EKARNDQLED LIDIHSEEMQ IHKEEVIQMM
801: RLAMWCLQID YNKRPQMSVA VKVLEGTVNV ETNIEFNFVA MVPNNLTNDG KLASSAPLLA SHLSGPR
Best Arabidopsis Sequence Match ( AT1G34300.1 )
(BLAST)
001: MAVKTPFLKL LPLLLLLLHF PFSFSTIPLG SVIYASGSNQ NWPSPNSTFS VSFVPSPSPN SFLAAVSFAG SVPIWSAGTV DSRGSLRLHT SGSLRLTNGS
101: GTTVWDSKTD RLGVTSGSIE DTGEFILLNN RSVPVWSSFD NPTDTIVQSQ NFTAGKILRS GLYSFQLERS GNLTLRWNTS AIYWNHGLNS SFSSNLSSPR
201: LSLQTNGVVS IFESNLLGGA EIVYSGDYGD SNTFRFLKLD DDGNLRIYSS ASRNSGPVNA HWSAVDQCLV YGYCGNFGIC SYNDTNPICS CPSRNFDFVD
301: VNDRRKGCKR KVELSDCSGN TTMLDLVHTR LFTYEDDPNS ESFFAGSSPC RANCLSSVLC LASVSMSDGS GNCWQKHPGS FFTGYQWPSV PSTSYVKVCG
401: PVVANTLERA TKGDDNNSKV HLWIVAVAVI AGLLGLVAVE IGLWWCCCRK NPRFGTLSSH YTLLEYASGA PVQFTYKELQ RCTKSFKEKL GAGGFGTVYR
501: GVLTNRTVVA VKQLEGIEQG EKQFRMEVAT ISSTHHLNLV RLIGFCSQGR HRLLVYEFMR NGSLDNFLFT TDSAKFLTWE YRFNIALGTA KGITYLHEEC
601: RDCIVHCDIK PENILVDDNF AAKVSDFGLA KLLNPKDNRY NMSSVRGTRG YLAPEWLANL PITSKSDVYS YGMVLLELVS GKRNFDVSEK TNHKKFSIWA
701: YEEFEKGNTK AILDTRLSED QTVDMEQVMR MVKTSFWCIQ EQPLQRPTMG KVVQMLEGIT EIKNPLCPKT ISEVSFSGNS MSTSHASMFV ASGPTRSSSF
801: SATRSFQTMG ITSSGPASTR ISEGSMLGS
Arabidopsis Description
G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Source:UniProtKB/Swiss-Prot;Acc:Q9XID3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.