Factsheet for VIT_12s0028g01430.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 3
extracellular 4
golgi 4
plasma membrane 6
endoplasmic reticulum 5
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0028g01530.t01	Wine grape	plasma membrane	83.73	79.45
VIT_08s0032g00830.t01	Wine grape	cytosol	9.64	75.49
Solyc07g055410.1.1	Tomato	cytosol	7.01	69.14
Solyc07g055430.1.1	Tomato	cytosol	10.14	66.94
PGSC0003DMT400044735	Potato	cytosol	14.14	64.2
Solyc07g055420.1.1	Tomato	cytosol	17.4	63.76
HORVU3Hr1G002240.1	Barley	cytosol	19.27	62.6
Solyc07g055400.1.1	Tomato	cytosol	18.02	61.28
Solyc07g055580.1.1	Tomato	plasma membrane	22.53	61.22
Solyc07g055630.2.1	Tomato	cytosol	24.16	60.88
VIT_12s0028g01450.t01	Wine grape	plasma membrane	31.66	60.24
Solyc07g055650.1.1	Tomato	cytosol, plasma membrane, plastid	30.54	58.1
VIT_08s0032g00810.t01	Wine grape	cytosol	12.89	57.22
Solyc07g055570.1.1	Tomato	cytosol	12.77	56.04
TraesCS3A01G063800.1	Wheat	cytosol	12.39	55.62
TraesCS3A01G015300.1	Wheat	cytosol	23.28	54.55
VIT_12s0028g01460.t01	Wine grape	plasma membrane	52.69	54.18
TraesCS3A01G014700.1	Wheat	cytosol	22.4	53.75
HORVU2Hr1G098980.1	Barley	cytosol, mitochondrion	8.14	53.72
PGSC0003DMT400044522	Potato	cytosol, nucleus, plasma membrane	48.44	53.16
PGSC0003DMT400044620	Potato	cytosol	34.17	53.01
PGSC0003DMT400044506	Potato	plasma membrane	35.29	52.13
TraesCS6D01G386500.1	Wheat	cytosol	33.79	50.75
TraesCS5A01G458600.1	Wheat	nucleus, plasma membrane, plastid	26.66	50.12
TraesCSU01G045500.1	Wheat	plasma membrane	24.03	50.0
TraesCS6B01G444200.1	Wheat	cytosol	32.29	49.9
VIT_12s0028g01280.t01	Wine grape	plasma membrane	53.07	49.25
VIT_12s0028g01490.t01	Wine grape	cytosol	6.76	49.09
TraesCS7B01G273000.1	Wheat	plastid	24.78	49.01
HORVU3Hr1G002230.1	Barley	plasma membrane	9.76	48.45
GSMUA_Achr6P05560_001	Banana	plasma membrane	31.79	47.74
TraesCS1D01G014300.1	Wheat	plasma membrane	39.55	47.73
PGSC0003DMT400044668	Potato	plasma membrane	49.81	47.27
TraesCS5B01G468100.1	Wheat	nucleus	34.17	46.83
TraesCS6B01G445200.1	Wheat	cytosol	37.55	46.58
TraesCS5D01G018800.1	Wheat	cytosol	37.55	46.51
HORVU1Hr1G005720.5	Barley	cytosol, plasma membrane	44.81	46.49
PGSC0003DMT400044608	Potato	plasma membrane	48.81	46.37
PGSC0003DMT400096753	Potato	plasma membrane	48.31	46.34
PGSC0003DMT400044515	Potato	plasma membrane	48.06	45.99
TraesCS3D01G013600.1	Wheat	plastid	24.28	45.97
PGSC0003DMT400044503	Potato	extracellular, plasma membrane, vacuole	46.43	44.97
PGSC0003DMT400044528	Potato	plasma membrane	47.56	44.92
HORVU5Hr1G001800.2	Barley	cytosol	38.67	44.85
Os04t0303100-00	Rice	plasma membrane	46.06	44.07
TraesCS7A01G354700.1	Wheat	plastid	38.92	43.8
VIT_12s0028g01640.t01	Wine grape	plasma membrane	36.3	43.67
TraesCS4A01G026200.1	Wheat	cytosol, nucleus, plasma membrane	39.05	43.45
TraesCS6D01G386200.1	Wheat	plasma membrane	44.06	43.3
GSMUA_Achr6P05570_001	Banana	mitochondrion, plastid	31.79	43.2
VIT_12s0028g01520.t01	Wine grape	plasma membrane	71.09	43.0
TraesCSU01G171900.1	Wheat	plasma membrane	43.55	42.54
TraesCS6B01G444600.1	Wheat	plasma membrane	43.68	42.35
TraesCS2B01G290100.3	Wheat	plasma membrane	44.31	42.19
HORVU6Hr1G092620.1	Barley	plasma membrane	42.05	42.0
TraesCS3A01G015100.1	Wheat	plasma membrane	24.78	41.86
EES15335	Sorghum	plasma membrane	44.31	41.79
TraesCS1A01G017200.1	Wheat	plasma membrane	43.43	41.76
HORVU3Hr1G002210.3	Barley	plasma membrane	25.28	41.65
TraesCS3A01G016100.1	Wheat	cytosol	6.38	41.46
TraesCS3D01G012800.1	Wheat	plasma membrane	22.9	41.4
TraesCS2A01G271900.1	Wheat	plasma membrane	40.68	41.35
TraesCS3B01G079400.1	Wheat	cytosol, plasma membrane, plastid	26.53	41.33
EES14230	Sorghum	plasma membrane	40.93	41.13
Zm00001d016223_P001	Maize	endoplasmic reticulum, plasma membrane	41.93	41.1
Zm00001d025065_P001	Maize	cytosol	36.92	41.03
OQU80090	Sorghum	plasma membrane	40.3	40.97
TraesCS3A01G064400.1	Wheat	cytosol	26.03	40.86
EES00096	Sorghum	plasma membrane	44.18	40.72
TraesCSU01G045100.1	Wheat	cytosol	6.26	40.65
TraesCSU01G166600.1	Wheat	cytosol	6.26	40.65
Os02t0234450-00	Rice	plasma membrane	42.43	40.55
TraesCS5D01G469700.1	Wheat	plasma membrane	44.43	40.34
HORVU7Hr1G089080.11	Barley	plasma membrane	42.3	40.33
KXG29880	Sorghum	plasma membrane	42.18	40.17
KXG27741	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	39.3	40.1
TraesCS7D01G368100.1	Wheat	plasma membrane	41.93	39.83
TraesCS2A01G429400.1	Wheat	plasma membrane	41.68	39.83
HORVU2Hr1G124190.2	Barley	endoplasmic reticulum, plasma membrane	39.67	39.82
HORVU2Hr1G124250.1	Barley	endoplasmic reticulum, plasma membrane	39.67	39.82
EER88498	Sorghum	plasma membrane	41.8	39.76
TraesCS2B01G449900.1	Wheat	extracellular, plasma membrane	41.55	39.71
TraesCS2A01G580900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	39.42	39.67
TraesCS2D01G427100.1	Wheat	extracellular, plasma membrane	41.18	39.54
TraesCS3D01G064800.1	Wheat	cytosol, plasma membrane, plastid	25.91	39.35
HORVU5Hr1G000910.1	Barley	endoplasmic reticulum, plasma membrane	39.3	39.3
KXG37964	Sorghum	endoplasmic reticulum, golgi, vacuole	39.67	39.23
Zm00001d008891_P001	Maize	plasma membrane	43.43	39.21
HORVU2Hr1G100250.10	Barley	plasma membrane	40.68	39.06
TraesCS3A01G063700.1	Wheat	cytosol, plasma membrane, plastid	27.03	38.85
HORVU6Hr1G092730.1	Barley	plasma membrane	11.76	38.84
HORVU2Hr1G066280.1	Barley	plasma membrane	40.3	38.7
VIT_12s0028g01650.t01	Wine grape	plasma membrane	40.55	38.48
TraesCS2D01G419800.1	Wheat	mitochondrion	29.16	37.82
TraesCS3A01G064300.1	Wheat	cytosol	25.91	37.16
VIT_12s0028g01630.t01	Wine grape	plastid	41.43	37.02
OQU86484	Sorghum	cytosol	9.51	36.36
EES03148	Sorghum	plasma membrane	27.41	36.32
TraesCS3D01G063800.1	Wheat	plasma membrane	29.04	36.25
HORVU3Hr1G002220.1	Barley	plasma membrane	28.54	36.25
TraesCSU01G045400.1	Wheat	plasma membrane	28.79	35.99
TraesCS3D01G012900.1	Wheat	plasma membrane	29.04	35.8
OQU86485	Sorghum	plasma membrane	27.91	35.79
TraesCS3D01G064700.2	Wheat	plasma membrane	28.79	35.77
TraesCS3D01G062500.1	Wheat	plasma membrane	27.66	35.76
TraesCS3B01G076900.1	Wheat	plasma membrane	28.66	35.67
TraesCS3B01G077000.1	Wheat	plasma membrane	28.41	35.47
Os01t0113350-00	Rice	plasma membrane, vacuole	28.79	35.28
TraesCS3A01G016300.1	Wheat	plasma membrane	28.16	35.21
HORVU3Hr1G012100.2	Barley	plasma membrane	28.16	35.05
Zm00001d053135_P001	Maize	plasma membrane	28.04	34.73
TraesCS3D01G062600.1	Wheat	plasma membrane	27.91	34.52
Zm00001d053087_P001	Maize	plasma membrane	28.16	34.46
VIT_12s0028g01270.t01	Wine grape	plasma membrane	52.69	34.14
TraesCS2D01G591000.1	Wheat	plasma membrane	24.53	33.91
Os01t0113650-00	Rice	mitochondrion, plasma membrane	27.78	33.84
TraesCS2D01G419700.1	Wheat	cytosol	27.91	33.63
VIT_04s0008g05500.t01	Wine grape	cytosol, nucleus, plasma membrane	32.79	33.16
VIT_11s0016g04840.t01	Wine grape	plasma membrane	18.65	33.11
VIT_18s0086g00200.t01	Wine grape	cytosol	24.78	31.99
VIT_16s0050g01920.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	27.91	29.89
VIT_16s0050g01880.t01	Wine grape	plasma membrane	31.41	29.29
HORVU3Hr1G012080.10	Barley	plastid	18.52	29.25
VIT_11s0016g05440.t01	Wine grape	plasma membrane	29.29	28.82
VIT_18s0086g00210.t01	Wine grape	plasma membrane	30.54	28.74
Solyc07g055640.1.1	Tomato	cytosol	29.16	28.38
VIT_09s0002g06830.t01	Wine grape	plasma membrane	31.54	28.12
HORVU3Hr1G012050.1	Barley	plasma membrane	14.02	27.12
TraesCS3B01G075300.1	Wheat	plasma membrane	13.77	26.51
TraesCS3D01G062900.1	Wheat	extracellular, plasma membrane, vacuole	10.26	21.69
TraesCS6A01G402100.1	Wheat	plasma membrane	43.8	20.92
VIT_18s0001g03390.t01	Wine grape	plastid	20.9	19.67

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:18.4.1.24.2	Gene3D:2.90.10.10	Gene3D:3.30.200.20	InterPro:Bulb-type_lectin_dom	InterPro:Bulb-type_lectin_dom_sf	ProteinID:CCB47417
ProteinID:CCB47417.1	UniProt:F6H549	EMBL:FN595235	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR001480	InterPro:IPR003609	InterPro:IPR036426	InterPro:Kinase-like_dom_sf	PFAM:PF00069
PFAM:PF01453	PFAM:PF08276	PIRSF:PIRSF000641	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS50927	PFscan:PS50948	PANTHER:PTHR27002	PANTHER:PTHR27002:SF178	InterPro:Pan_app	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00108	SMART:SM00220	InterPro:SRK-like_kinase	SUPFAM:SSF51110	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002109817	ArrayExpress:VIT_12s0028g01430	EnsemblPlantsGene:VIT_12s0028g01430
EnsemblPlants:VIT_12s0028g01430.t01	:	:	:	:	:

Description

No Description!

Coordinates

chr12:+:2098119..2115326

Molecular Weight (calculated)

89114.8 Da

IEP (calculated)

5.081

GRAVY (calculated)

-0.212

Length

799 amino acids

Sequence
(BLAST)

001: MPTWCLIING FVFAVLIFPN HNATYDSILR TDEMKVVWSA NRNSLVSKNA TLQLTEQGDL VLKEADGTTA VWSTNTCGKS VVGLNLTETG NLMLFDSNNE
101: TVWQSFDHPT DSLLPEQRLV SGQKLLTASL ATDNWTEGML SLSVTNEALV AYVESNPPQI YYLLEGSDTD TKGKTKQNYI LLGNESLDGF IHGADPNYPD
201: SRIFIATDLS AQFIKLGPDG HLRAYGWKNN SWEAADLLTD WLSFPNHLSD VDDCQYPLVC GKYGICSERQ CSCPPPSANG TNYFRPVDDN LPSHGCYTTK
301: PIACGSSQYH HLLELQHVGY FAFSSDISST NVENCKQACL NNCSCKAALF QYTDDPLDGD CCLLSEVFSL MTTDRGDIKS STFLKVAISP IDIGNMKKKG
401: HARVILVSSL AAFFGVFIFM TTCFFLFRKK KDSIEFEEDY LDQVSGMPTR FSFQDLKSTT QNFSCKLGEG GFGSVYEGTL SNGVKVAVKH LEGLAQVKKS
501: FSAEVETIGS IHHVNLVRLI GFCAEKSHRL LVYEYMCNGS LDKWIFHKNQ HLSLGWESRR KIILDIAKGL AYLHEECRQK IFHLDIKPQN ILLDEHLNAK
601: VSDFGLSKLI DKDQSQVVTT MRGTPGYLAP EWLSSVITEK VDVYSFGVVL LEILCGRRNV DRSQPEEDMH LLGIFRRKAN EGQVLDMVDK NSEDMQRHGA
701: EVMELMKVAA WCLQNDYARR PSMSVVVKAL EGLVDIEDDL IYNFSYSPLP RGIAHKLQTG HSNEVDMGDA AGDIAGSLKS NINARYVILE EVDEQEDST

Best Arabidopsis Sequence Match ( AT4G32300.1 )
(BLAST)

001: MRGVFIVIVT CLVFLPDPLR AGVASIGSIT PGFGGSQMNY INNDGIFLES NNSAFGFGFV TTQDSVTLFT LSIIHKSSTK LIWSANRASP VSNSDKFVFD
101: DNGNVVMEGT EVWRLDNSGK NASRIELRDS GNLVVVSVDG TSIWESFDHP TDTLITNQAF KEGMKLTSSP SSSNMTYALE IKSGDMVLSV NSLTPQVYWS
201: MANARERIIN KDGGVVTSSS LLGNSWRFFD QKQVLLWQFV FSDNKDDNTT WIAVLGNNGV ISFSNLGSGA SAADSSTKIP SDLCGTPEPC GPYYVCSGSK
301: VCGCVSGLSR ARSDCKTGIT SPCKKTKDNA TLPLQLVSAG DGVDYFALGY APPFSKKTDL DSCKEFCHNN CSCLGLFFQN SSGNCFLFDY IGSFKTSGNG
401: GSGFVSYIKI ASTGSGGGDN GEDDGKHFPY VVIIVVVTVF IIAVLIFVAF RIHKRKKMIL EAPQESSEED NFLENLSGMP IRFAYKDLQS ATNNFSVKLG
501: QGGFGSVYEG TLPDGSRLAV KKLEGIGQGK KEFRAEVSII GSIHHLHLVR LRGFCAEGAH RLLAYEFLSK GSLERWIFRK KDGDVLLDWD TRFNIALGTA
601: KGLAYLHEDC DARIVHCDIK PENILLDDNF NAKVSDFGLA KLMTREQSHV FTTMRGTRGY LAPEWITNYA ISEKSDVYSY GMVLLELIGG RKNYDPSETS
701: EKCHFPSFAF KKMEEGKLMD IVDGKMKNVD VTDERVQRAM KTALWCIQED MQTRPSMSKV VQMLEGVFPV VQPPSSSTMG SRLYSSFFKS ISEDGGATTS
801: SGPSDCNSEN YLSAVRLSGP R

Arabidopsis Description

SD25G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWZ5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.