Factsheet for VIT_18s0001g03390.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
vacuole 2
plasma membrane 3
nucleus 1
extracellular 1
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	vacuole
Plant-mPloc:	nucleus, plasma membrane
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra027975.1-P	Field mustard	plasma membrane	33.1	63.0
CDY42356	Canola	plasma membrane	32.98	62.78
PGSC0003DMT400002386	Potato	plasma membrane	44.41	43.28
KRH53204	Soybean	plasma membrane	43.46	42.17
AT5G35370.1	Thale cress	plasma membrane	40.16	39.11
CDX95197	Canola	plasma membrane	39.69	39.1
VIT_08s0032g00830.t01	Wine grape	cytosol	4.59	38.24
Solyc04g015460.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	36.75	35.9
VIT_12s0028g01450.t01	Wine grape	plasma membrane	17.67	35.71
VIT_11s0016g04840.t01	Wine grape	plasma membrane	17.55	33.11
VIT_08s0032g00810.t01	Wine grape	cytosol	6.83	32.22
VIT_18s0086g00200.t01	Wine grape	cytosol	20.49	28.11
VIT_04s0008g05500.t01	Wine grape	cytosol, nucleus, plasma membrane	24.15	25.95
VIT_12s0028g01640.t01	Wine grape	plasma membrane	20.26	25.9
VIT_16s0050g01920.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	20.97	23.86
VIT_11s0016g05440.t01	Wine grape	plasma membrane	22.38	23.4
VIT_12s0028g01460.t01	Wine grape	plasma membrane	20.61	22.52
VIT_09s0002g06830.t01	Wine grape	plasma membrane	22.97	21.76
VIT_18s0086g00210.t01	Wine grape	plasma membrane	21.67	21.67
VIT_16s0050g01880.t01	Wine grape	plasma membrane	21.67	21.47
VIT_12s0028g01430.t01	Wine grape	plasma membrane	19.67	20.9
VIT_12s0028g01280.t01	Wine grape	plasma membrane	20.38	20.09
VIT_12s0028g01650.t01	Wine grape	plasma membrane	19.91	20.07
VIT_12s0028g01630.t01	Wine grape	plastid	20.85	19.8
VIT_12s0028g01530.t01	Wine grape	plasma membrane	19.2	19.36
VIT_12s0028g01490.t01	Wine grape	cytosol	2.47	19.09
VIT_12s0028g01270.t01	Wine grape	plasma membrane	20.85	14.36
VIT_12s0028g01520.t01	Wine grape	plasma membrane	20.14	12.94

Protein Annotations

KEGG:00550+2.4.1.129	Gene3D:1.10.3810.10	Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	ProteinID:CCB45505
ProteinID:CCB45505.1	UniProt:F6H0T6	EMBL:FN595227	GO:GO:0000003	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0008150
GO:GO:0008152	GO:GO:0009856	GO:GO:0009875	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0048544	InterPro:Glyco_trans_51	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	InterPro:Lysozyme-like_dom_sf	InterPro:PBP_transglycosylase	PFAM:PF00069	PFAM:PF00912	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27002	PANTHER:PTHR27002:SF112	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF53955	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI000210A646
ArrayExpress:VIT_18s0001g03390	EnsemblPlantsGene:VIT_18s0001g03390	EnsemblPlants:VIT_18s0001g03390.t01	unigene:Vvi.5662	SEG:seg	:

Description

No Description!

Coordinates

chr18:+:3298924..3306685

Molecular Weight (calculated)

94843.3 Da

IEP (calculated)

7.812

GRAVY (calculated)

-0.092

Length

849 amino acids

Sequence
(BLAST)

001: MNCTASNHLL FTTSPNLTLR GDRSPKQLLF FFCKIPTPSP NGNIPQTYHT RQNSVCGRVH SPHFCSSQDP IEKKTHAITE IFVLFVFSLT LLCIRLLSNA
101: LLPDFPQRWR SLVAFSEEAE ARVSAYPSHL WKAIVAYEDR RFFSHFGVDP VGIARAALSL SALGGGSTIT QQSIKFVGWD CSCLGIFHEN SSGSCYLVEN
201: VLGSLISSST NENVQLGCIK VLVGSSPNMD GNNSSSNQSQ EFPIAALVLL PSTGFFLFVA LGFLWWRRWG FSKNRDLKLG HSSSPSSEDL DAFSIPGLPI
301: RFEYEEIEAA TDNFKTQIGS GGFGAVYKGI MPDKTLVAVK KITNLGVQGK KEFCTEIAVI GNIHHVNLVK LKGFCAKGRQ RLLVYEYMNR SSLDRTLFSN
401: GPVLEWQERV DIALGTARGL AYLHSGCEHK IIHCDVKPEN ILLHDNFQAK ISDFGLSKLL SPEESTLFTT MRGTRGYLAP EWLTSSAISD KTDVYSFGMV
501: LLELVSGRKN CSLRTQSHSI DDGSSGGGHS SLLSGSEPVY FPLFALEMHE QGRYLELADP RLEGRVTSEE VEKLVLVALC CVHEEPTLRP CMVSVVGMLE
601: GGITLSQPRT ESLNFLRFYG RRFTEASMVE ETDGQQTVVL YPQANLVKNT CLKNERTFSR KIVEMVLALA LERTISKWRI LSLYMSKIYW GHGIYGVESA
701: SIFYFGKHPS LLCLGESALL AGIIPAPELR SPFRDCSRGK TFQARVLKRM VEFGFLDVET ALLAVKQSLQ PRINCPEYSD GILLQLSLPN KGLYWASKGK
801: QGHVQLPIME IWDWEKESKV WEVMEEMENW ACRLSELKNN NFRLKLNGR

Best Arabidopsis Sequence Match ( AT5G35370.1 )
(BLAST)

001: MKSTFLLLLL LLSLNLLFVF VSCASSIEFV YPNFTASNLR FVDSSKGAFL LSRNSIFKAG LFSPGGDDSS TGFYFSVVHV DSGSTIWSSN RDSPVSSSGT
101: MNLTPQGISV IEDGKSQIPV WSTPVLASPV KSLRLTDAGN LLLLDHLNVS LWESFDFPTD SIVLGQRLKL GMFLSGSVSR SDFSTGDYKF LVGESDGLMQ
201: WRGQNYWKLR MHIRANVDSN FPVEYLTVTT SGLALMARNG TVVVVRVALP PSSDFRVAKM DSSGKFIVSR FSGKNLVTEF SGPMDSCQIP FVCGKLGLCN
301: LDNASENQSC SCPDEMRMDA GKGVCVPVSQ SLSLPVSCEA RNISYLELGL GVSYFSTHFT DPVEHGLPLL ACHDICSKNC SCLGVFYENT SRSCYLVKDS
401: FGSLSLVKNS PENHDLIGYV KLSIRKTNAQ PPGNNNRGGS SFPVIALVLL PCSGFFLLIA LGLLWWRRCA VMRYSSIREK QVTRPGSFES GDLGSFHIPG
501: LPQKFEFEEL EQATENFKMQ IGSGGFGSVY KGTLPDETLI AVKKITNHGL HGRQEFCTEI AIIGNIRHTN LVKLRGFCAR GRQLLLVYEY MNHGSLEKTL
601: FSGNGPVLEW QERFDIALGT ARGLAYLHSG CDQKIIHCDV KPENILLHDH FQPKISDFGL SKLLNQEESS LFTTMRGTRG YLAPEWITNA AISEKADVYS
701: YGMVLLELVS GRKNCSFRSR SNSVTEDNNQ NHSSTTTTST GLVYFPLYAL DMHEQGRYME LADPRLEGRV TSQEAEKLVR IALCCVHEEP ALRPTMAAVV
801: GMFEGSIPLG NPRMESLNFL RFYGLRFAES SMVEGQNGES ETMVFHRRES SNSGGSRQSA SYIASQEVSG PR

Arabidopsis Description

G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 [Source:UniProtKB/Swiss-Prot;Acc:O65238]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.