Factsheet for VIT_16s0050g01880.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
golgi 5
plasma membrane 8
endoplasmic reticulum 6
vacuole 5
plastid 2
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol, nucleus, plasma membrane, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_16s0050g01920.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	80.05	91.96
PGSC0003DMT400074356	Potato	cytosol, nucleus, plasma membrane	66.63	75.63
KRH35213	Soybean	plasma membrane	74.1	73.58
KRG91610	Soybean	plasma membrane	73.86	73.35
Solyc03g007790.2.1	Tomato	plasma membrane	73.51	72.92
KRG94132	Soybean	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	32.21	72.82
Solyc06g036470.1.1	Tomato	plasma membrane	69.78	72.4
AT5G24080.2	Thale cress	plasma membrane	67.09	65.94
CDX88071	Canola	plasma membrane	66.39	64.66
CDX80409	Canola	plasma membrane	64.18	64.55
Bra009730.1-P	Field mustard	plasma membrane	66.28	64.55
CDX80408	Canola	cytosol	39.91	58.16
GSMUA_Achr4P02510_001	Banana	plasma membrane	48.89	57.71
VIT_08s0032g00830.t01	Wine grape	cytosol	4.55	38.24
VIT_12s0028g01450.t01	Wine grape	plasma membrane	18.67	38.1
VIT_18s0086g00200.t01	Wine grape	cytosol	26.95	37.32
VIT_18s0086g00210.t01	Wine grape	plasma membrane	34.66	34.98
VIT_11s0016g04840.t01	Wine grape	plasma membrane	18.32	34.89
VIT_04s0008g05500.t01	Wine grape	cytosol, nucleus, plasma membrane	32.09	34.81
VIT_08s0032g00810.t01	Wine grape	cytosol	7.0	33.33
VIT_11s0016g05440.t01	Wine grape	plasma membrane	31.16	32.88
VIT_12s0028g01640.t01	Wine grape	plasma membrane	25.44	32.83
VIT_12s0028g01460.t01	Wine grape	plasma membrane	28.82	31.79
VIT_12s0028g01430.t01	Wine grape	plasma membrane	29.29	31.41
VIT_12s0028g01530.t01	Wine grape	plasma membrane	30.11	30.64
VIT_12s0028g01650.t01	Wine grape	plasma membrane	28.7	29.22
VIT_09s0002g06830.t01	Wine grape	plasma membrane	30.11	28.79
VIT_12s0028g01280.t01	Wine grape	plasma membrane	28.12	27.99
VIT_12s0028g01630.t01	Wine grape	plastid	27.77	26.62
VIT_18s0001g03390.t01	Wine grape	plastid	21.47	21.67
VIT_12s0028g01270.t01	Wine grape	plasma membrane	29.05	20.19
VIT_12s0028g01490.t01	Wine grape	cytosol	2.57	20.0
VIT_12s0028g01520.t01	Wine grape	plasma membrane	30.22	19.61

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
EntrezGene:100243904	wikigene:100243904	MapMan:18.4.1.24.2	Gene3D:2.90.10.10	Gene3D:3.30.200.20	EMBL:AM432623
InterPro:Bulb-type_lectin_dom	InterPro:Bulb-type_lectin_dom_sf	ProteinID:CAN82496	ProteinID:CAN82496.1	ProteinID:CCB47797	ProteinID:CCB47797.1
UniProt:F6H6J6	EMBL:FN595243	GO:GO:0000003	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0008150	GO:GO:0008152
GO:GO:0009856	GO:GO:0009875	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0048544	InterPro:IPR000719	InterPro:IPR001480
InterPro:IPR036426	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100243904	wikigene:LOC100243904	PFAM:PF00069	PFAM:PF00954
PFAM:PF01453	PIRSF:PIRSF000641	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50927
PANTHER:PTHR27002	PANTHER:PTHR27002:SF339	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00108	SMART:SM00220
InterPro:SRK-like_kinase	SUPFAM:SSF51110	SUPFAM:SSF56112	InterPro:S_locus_glycoprot_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-TM
TMHMM:TMhelix	UniParc:UPI00015CC3A2	ArrayExpress:VIT_16s0050g01880	EnsemblPlantsGene:VIT_16s0050g01880	EnsemblPlants:VIT_16s0050g01880.t01	RefSeq:XP_002275726
RefSeq:XP_002275726.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr16:+:18826205..18829719

Molecular Weight (calculated)

94246.6 Da

IEP (calculated)

5.355

GRAVY (calculated)

-0.197

Length

857 amino acids

Sequence
(BLAST)

001: MASSSSPTRV LFFLALAGLV GVATGSVGLG ARLVAKENRA WVSENGTFAF GFSPVESDDR YQLGIWFGQL PGDRTMVWSA SRNSPVGKDA VLELDSTGNL
101: LLLDGDATVW SSNTSGEGVE TAYMSESGNF ILYNGTNFPL WQSFSHPSDT LLPNQPLTAS MELTSSSPAH GGYYTLQMLQ QPTSLSLGLI YNLPDSYITS
201: LQSYANYSYW SGPDISNVTG DVVAVLDEAG SFGIMYGSSS DGAVYVYKSD TDEKGLSSSV NQTVRPLVLR RLILEMNGNL RLYRWDDDVN GTRQWVPEWA
301: AVSNPCDIAG VCGNGVCSLD RSKTNASCTC LPGSSKVGDS GQCSENSSVS TGKCDNNHRN STASKLKMSI VQQTNYYYPE SSIIANYSNM SPLSKCGDAC
401: LSDCDCVASV YGLSEEKPYC WLLNSLEFGG FEDTSSTLFV KVGPNGSPEG NATGSGDSSD GLRDKVLVLP IVLSMIVLVA LLCFLLYHTV YRRRALKRSL
501: ESSLIVSGAP MNFSYRDLQS RTGNFSQLLG TGGFGSVYKG SLSDGTLVAV KKLDKVLPHG EKEFITEVNT IGSMHHMNLV RLCGYCSEGS HRLLVYEFMK
601: NGSLDKWIFP SKHCRDRLLD WGTRFHIAIA TAQGIAYFHE QCRNRIIHCD IKPENILLDE NFCPKVSDFG LAKLMGREHS HVVTMVRGTR GYLAPEWVSN
701: RPITVKADVY SYGMLLLEIV GGRRNLDMTF DAEDFFYPGW AFKEMSNGTT RKVADRRLEG AVEEEELERA LKTGFWCIQD EVFMRPSMGE VVKMLEGSLE
801: INTPPMPQTV LELMEEGLDN VYRAMKREFN QSSFFTINNS THPSSRATCS YSTMSPR

Best Arabidopsis Sequence Match ( AT5G24080.2 )
(BLAST)

001: MSSFHFYFPS VGLFSFFCFF LVSLATEPHI GLGSKLKASE PNRAWVSANG TFAIGFTRFK PTDRFLLSIW FAQLPGDPTI VWSPNRNSPV TKEAVLELEA
101: TGNLVLSDQN TVVWTSNTSN HGVESAVMSE SGNFLLLGTE VTAGPTIWQS FSQPSDTLLP NQPLTVSLEL TSNPSPSRHG HYSLKMLQQH TSLSLGLTYN
201: INLDPHANYS YWSGPDISNV TGDVTAVLDD TGSFKIVYGE SSIGAVYVYK NPVDDNRNYN NSSNLGLTKN PVLRRLVLEN NGNLRLYRWD NDMNGSSQWV
301: PEWAAVSNPC DIAGICGNGV CNLDRTKKNA DCLCLPGSVK LPDQENAKLC SDNSSLVQEC ESNINRNGSF KISTVQETNY YFSERSVIEN ISDISNVRKC
401: GEMCLSDCKC VASVYGLDDE KPYCWILKSL NFGGFRDPGS TLFVKTRANE SYPSNSNNND SKSRKSHGLR QKVLVIPIVV GMLVLVALLG MLLYYNLDRK
501: RTLKRAAKNS LILCDSPVSF TYRDLQNCTN NFSQLLGSGG FGTVYKGTVA GETLVAVKRL DRALSHGERE FITEVNTIGS MHHMNLVRLC GYCSEDSHRL
601: LVYEYMINGS LDKWIFSSEQ TANLLDWRTR FEIAVATAQG IAYFHEQCRN RIIHCDIKPE NILLDDNFCP KVSDFGLAKM MGREHSHVVT MIRGTRGYLA
701: PEWVSNRPIT VKADVYSYGM LLLEIVGGRR NLDMSYDAED FFYPGWAYKE LTNGTSLKAV DKRLQGVAEE EEVVKALKVA FWCIQDEVSM RPSMGEVVKL
801: LEGTSDEINL PPMPQTILEL IEEGLEDVYR AMRREFNNQL SSLTVNTITT SQSYRSSSRS HATCSYSSMS PR

Arabidopsis Description

G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLV4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.