Factsheet for VIT_12s0028g01630.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
plasma membrane 2
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0028g01650.t01	Wine grape	plasma membrane	64.09	68.05
VIT_12s0028g01640.t01	Wine grape	plasma membrane	47.32	63.7
HORVU3Hr1G002240.1	Barley	cytosol	16.55	60.16
TraesCS3A01G063800.1	Wheat	cytosol	10.96	55.06
TraesCS3A01G015300.1	Wheat	cytosol	20.58	53.96
TraesCS3A01G014700.1	Wheat	cytosol	19.69	52.85
VIT_12s0028g01450.t01	Wine grape	plasma membrane	23.83	50.71
VIT_08s0032g00830.t01	Wine grape	cytosol	5.7	50.0
HORVU3Hr1G002230.1	Barley	plasma membrane	8.84	49.07
TraesCSU01G045500.1	Wheat	plasma membrane	21.03	48.96
TraesCS5A01G458600.1	Wheat	nucleus, plasma membrane, plastid	22.71	47.76
GSMUA_Achr6P05560_001	Banana	plasma membrane	28.19	47.37
TraesCS6B01G444200.1	Wheat	cytosol	27.07	46.81
TraesCS7B01G273000.1	Wheat	plastid	21.14	46.78
TraesCS3D01G013600.1	Wheat	plastid	21.7	45.97
TraesCS6D01G386500.1	Wheat	cytosol	27.18	45.68
VIT_08s0032g00810.t01	Wine grape	cytosol	9.17	45.56
VIT_12s0028g01460.t01	Wine grape	plasma membrane	39.37	45.3
TraesCS5B01G468100.1	Wheat	nucleus	28.3	43.4
HORVU2Hr1G098980.1	Barley	cytosol, mitochondrion	5.82	42.98
TraesCS2B01G290100.3	Wheat	plasma membrane	39.93	42.55
Os04t0303100-00	Rice	plasma membrane	39.49	42.28
TraesCS2A01G271900.1	Wheat	plasma membrane	37.14	42.24
TraesCS6B01G445200.1	Wheat	cytosol	30.31	42.08
EES14230	Sorghum	plasma membrane	37.25	41.89
TraesCS3D01G012800.1	Wheat	plasma membrane	20.69	41.86
TraesCS5D01G018800.1	Wheat	cytosol	30.09	41.71
TraesCS7A01G354700.1	Wheat	plastid	33.11	41.69
TraesCS4A01G026200.1	Wheat	cytosol, nucleus, plasma membrane	33.45	41.64
GSMUA_Achr6P05570_001	Banana	mitochondrion, plastid	27.29	41.5
TraesCS3A01G016100.1	Wheat	cytosol	5.7	41.46
EES15335	Sorghum	plasma membrane	39.26	41.44
HORVU1Hr1G005720.5	Barley	cytosol, plasma membrane	35.68	41.43
VIT_12s0028g01430.t01	Wine grape	plasma membrane	37.02	41.43
TraesCS1D01G014300.1	Wheat	plasma membrane	30.65	41.39
TraesCSU01G171900.1	Wheat	plasma membrane	37.7	41.2
TraesCS3A01G015100.1	Wheat	plasma membrane	21.7	41.01
HORVU6Hr1G092620.1	Barley	plasma membrane	36.58	40.88
HORVU3Hr1G002210.3	Barley	plasma membrane	22.15	40.82
TraesCS6B01G444600.1	Wheat	plasma membrane	37.47	40.66
TraesCSU01G045100.1	Wheat	cytosol	5.59	40.65
TraesCSU01G166600.1	Wheat	cytosol	5.59	40.65
VIT_12s0028g01530.t01	Wine grape	plasma membrane	38.26	40.62
TraesCS6D01G386200.1	Wheat	plasma membrane	36.91	40.59
TraesCS3B01G079400.1	Wheat	cytosol, plasma membrane, plastid	23.27	40.55
KXG29880	Sorghum	plasma membrane	38.03	40.52
Os02t0234450-00	Rice	plasma membrane	37.7	40.31
EES00096	Sorghum	plasma membrane	39.04	40.25
VIT_12s0028g01280.t01	Wine grape	plasma membrane	38.7	40.19
TraesCS3A01G064400.1	Wheat	cytosol	22.82	40.08
Zm00001d016223_P001	Maize	endoplasmic reticulum, plasma membrane	36.47	40.0
TraesCS1A01G017200.1	Wheat	plasma membrane	37.14	39.95
TraesCS7D01G368100.1	Wheat	plasma membrane	37.25	39.6
EER88498	Sorghum	plasma membrane	37.14	39.52
HORVU5Hr1G001800.2	Barley	cytosol	30.43	39.48
Zm00001d008891_P001	Maize	plasma membrane	39.04	39.44
HORVU7Hr1G089080.11	Barley	plasma membrane	36.91	39.38
TraesCS3A01G063700.1	Wheat	cytosol, plasma membrane, plastid	24.38	39.21
TraesCS2D01G427100.1	Wheat	extracellular, plasma membrane	36.47	39.18
TraesCS3D01G064800.1	Wheat	cytosol, plasma membrane, plastid	23.04	39.16
TraesCS2B01G449900.1	Wheat	extracellular, plasma membrane	36.58	39.11
TraesCS5D01G469700.1	Wheat	plasma membrane	38.48	39.09
VIT_12s0028g01490.t01	Wine grape	cytosol	4.81	39.09
HORVU2Hr1G100250.10	Barley	plasma membrane	36.24	38.94
TraesCS2A01G429400.1	Wheat	plasma membrane	36.35	38.88
HORVU6Hr1G092730.1	Barley	plasma membrane	10.4	38.43
TraesCS3A01G064300.1	Wheat	cytosol	23.94	38.42
HORVU2Hr1G066280.1	Barley	plasma membrane	35.46	38.1
KXG37964	Sorghum	endoplasmic reticulum, golgi, vacuole	34.34	37.99
TraesCS3D01G062500.1	Wheat	plasma membrane	26.17	37.86
HORVU5Hr1G000910.1	Barley	endoplasmic reticulum, plasma membrane	33.78	37.8
HORVU2Hr1G124190.2	Barley	endoplasmic reticulum, plasma membrane	33.45	37.56
HORVU2Hr1G124250.1	Barley	endoplasmic reticulum, plasma membrane	33.45	37.56
OQU80090	Sorghum	plasma membrane	32.89	37.4
TraesCS2D01G419800.1	Wheat	mitochondrion	25.62	37.18
TraesCS2A01G580900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	33.0	37.15
Zm00001d025065_P001	Maize	cytosol	29.87	37.13
KXG27741	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	32.44	37.04
TraesCS3D01G063800.1	Wheat	plasma membrane	26.51	37.03
TraesCS3D01G064700.2	Wheat	plasma membrane	26.62	37.01
OQU86484	Sorghum	cytosol	8.61	36.84
TraesCS3B01G076900.1	Wheat	plasma membrane	26.4	36.76
TraesCS3D01G062600.1	Wheat	plasma membrane	26.51	36.69
EES03148	Sorghum	plasma membrane	24.72	36.65
Os01t0113350-00	Rice	plasma membrane, vacuole	26.62	36.5
TraesCS3B01G077000.1	Wheat	plasma membrane	26.06	36.41
Zm00001d053135_P001	Maize	plasma membrane	26.06	36.12
TraesCS3D01G012900.1	Wheat	plasma membrane	26.17	36.11
Zm00001d053087_P001	Maize	plasma membrane	26.29	35.99
TraesCSU01G045400.1	Wheat	plasma membrane	25.5	35.68
Os01t0113650-00	Rice	mitochondrion, plasma membrane	26.17	35.67
OQU86485	Sorghum	plasma membrane	24.72	35.47
HORVU3Hr1G002220.1	Barley	plasma membrane	24.94	35.45
HORVU3Hr1G012100.2	Barley	plasma membrane	25.39	35.36
TraesCS3A01G016300.1	Wheat	plasma membrane	25.06	35.05
TraesCS2D01G419700.1	Wheat	cytosol	24.5	33.03
VIT_11s0016g04840.t01	Wine grape	plasma membrane	16.55	32.89
VIT_04s0008g05500.t01	Wine grape	cytosol, nucleus, plasma membrane	28.97	32.78
TraesCS2D01G591000.1	Wheat	plasma membrane	21.03	32.53
VIT_18s0086g00200.t01	Wine grape	cytosol	21.14	30.53
HORVU3Hr1G012080.10	Barley	plastid	17.23	30.43
HORVU3Hr1G012050.1	Barley	plasma membrane	13.31	28.81
VIT_12s0028g01270.t01	Wine grape	plasma membrane	39.49	28.63
TraesCS3B01G075300.1	Wheat	plasma membrane	12.98	27.95
VIT_16s0050g01920.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	23.27	27.88
VIT_11s0016g05440.t01	Wine grape	plasma membrane	25.28	27.83
VIT_16s0050g01880.t01	Wine grape	plasma membrane	26.62	27.77
VIT_18s0086g00210.t01	Wine grape	plasma membrane	25.28	26.62
VIT_12s0028g01520.t01	Wine grape	plasma membrane	39.15	26.5
VIT_09s0002g06830.t01	Wine grape	plasma membrane	26.06	26.0
TraesCS3D01G062900.1	Wheat	extracellular, plasma membrane, vacuole	9.51	22.49
VIT_18s0001g03390.t01	Wine grape	plastid	19.8	20.85
TraesCS6A01G402100.1	Wheat	plasma membrane	37.36	19.96

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
EntrezGene:100262615	wikigene:100262615	MapMan:18.4.1.24.2	Gene3D:2.90.10.10	Gene3D:3.30.200.20	InterPro:Bulb-type_lectin_dom
InterPro:Bulb-type_lectin_dom_sf	ProteinID:CCB47405	ProteinID:CCB47405.1	UniProt:F6H537	EMBL:FN595235	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001480	InterPro:IPR036426	InterPro:Kinase-like_dom_sf
EntrezGene:LOC100262615	wikigene:LOC100262615	PFAM:PF00069	PFAM:PF01453	PIRSF:PIRSF000641	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50927	PANTHER:PTHR27002	PANTHER:PTHR27002:SF178	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00108	SMART:SM00220	InterPro:SRK-like_kinase	SUPFAM:SSF51110	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI00015C9A79	ArrayExpress:VIT_12s0028g01630	EnsemblPlantsGene:VIT_12s0028g01630	EnsemblPlants:VIT_12s0028g01630.t01
RefSeq:XP_002277451	RefSeq:XP_002277451.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr12:+:2314918..2317602

Molecular Weight (calculated)

98824.4 Da

IEP (calculated)

5.949

GRAVY (calculated)

-0.164

Length

894 amino acids

Sequence
(BLAST)

001: MAGSGFYLNS SLSPTGYNKN SINMTACPGD SSTVRVVPSR QNSVSFVQTV ISSSHNTGGA PYVTANGSSA HNTGGVPTAV ITNGSYSISM AGSAFYLNSS
101: LSPTWYNNNS INMTIYPGDS STVRVVLSRQ DSIGFVCGFY CIGTCSSYLF SVVVVGDNTS SLVWSANRDY PVKEDAILEL TGEEGLVLQD SDGTKVWSTN
201: ISGNSILGMN ITEAGNLVLF DSEGAMVWQS FDHPVDSLLV GQRLYEGQKL IASSSSTNWS LGPYYATLTA KDGFAVFVQD DQAETLMYYQ LVPDKKLSNS
301: TGSNYAELQQ DGFLVNMGAS QVTSGRNPYE FPLYSTIEFI KLEGDGHLRI HQLSSGKGFQ TIVDLITVDL GVCQHPLICG EYGVCREGQC SCPEDHDGVR
401: YFHETQSQLP DHGCSRITAL SCGPSLDQHH LMEIKNATYF SVIDLDAASP NIKDMEECKQ ACLQNCSCSG AFFRYEKNTS DGYCFMPSKI LSLREEHIPH
501: NNFSSATFIK VQIPFDAPPR NKRNLAAIVA GSSAGVIFII CLAIFIYLVM LRKSNSKEDG GYIVQVHVPG MLVRLPYEDI RLATEDFKER LGQGGFGSVF
601: KGMLADGTRI AVKRLDKMSQ GMREFLAEVE TIGSIHHFNL VRLIGFCAEK SNRLLVYEYM SNGSLENWIF YDGQRPCLDW QTRKKIVLDI AKGLAYLHEE
701: CRQRIVHLDI KPQNILLDEN FNAKVSDFGL SKLIDRDENQ VHSKMRGTPG YLAPELRDSK ISVKADIYSF GIVLLEIVSG RKNVDRNHSE SSFHMLRLLQ
801: KKAEEDRLIE IVENRNQDMQ NHEEVVRMIR IGAWCLQDDP TRRPSMSVVV KVLEGVLEVE PSITFKFFHA ITPTSVANNC VSSAVEASVL SNPR

Best Arabidopsis Sequence Match ( AT5G35370.1 )
(BLAST)

001: MKSTFLLLLL LLSLNLLFVF VSCASSIEFV YPNFTASNLR FVDSSKGAFL LSRNSIFKAG LFSPGGDDSS TGFYFSVVHV DSGSTIWSSN RDSPVSSSGT
101: MNLTPQGISV IEDGKSQIPV WSTPVLASPV KSLRLTDAGN LLLLDHLNVS LWESFDFPTD SIVLGQRLKL GMFLSGSVSR SDFSTGDYKF LVGESDGLMQ
201: WRGQNYWKLR MHIRANVDSN FPVEYLTVTT SGLALMARNG TVVVVRVALP PSSDFRVAKM DSSGKFIVSR FSGKNLVTEF SGPMDSCQIP FVCGKLGLCN
301: LDNASENQSC SCPDEMRMDA GKGVCVPVSQ SLSLPVSCEA RNISYLELGL GVSYFSTHFT DPVEHGLPLL ACHDICSKNC SCLGVFYENT SRSCYLVKDS
401: FGSLSLVKNS PENHDLIGYV KLSIRKTNAQ PPGNNNRGGS SFPVIALVLL PCSGFFLLIA LGLLWWRRCA VMRYSSIREK QVTRPGSFES GDLGSFHIPG
501: LPQKFEFEEL EQATENFKMQ IGSGGFGSVY KGTLPDETLI AVKKITNHGL HGRQEFCTEI AIIGNIRHTN LVKLRGFCAR GRQLLLVYEY MNHGSLEKTL
601: FSGNGPVLEW QERFDIALGT ARGLAYLHSG CDQKIIHCDV KPENILLHDH FQPKISDFGL SKLLNQEESS LFTTMRGTRG YLAPEWITNA AISEKADVYS
701: YGMVLLELVS GRKNCSFRSR SNSVTEDNNQ NHSSTTTTST GLVYFPLYAL DMHEQGRYME LADPRLEGRV TSQEAEKLVR IALCCVHEEP ALRPTMAAVV
801: GMFEGSIPLG NPRMESLNFL RFYGLRFAES SMVEGQNGES ETMVFHRRES SNSGGSRQSA SYIASQEVSG PR

Arabidopsis Description

G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 [Source:UniProtKB/Swiss-Prot;Acc:O65238]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.